RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 CAVIN4Q5BKX8 364 aa16.41■□□□□ 0.22
DDX41-204ENST00000504807 VPS37DQ86XT2 251 aa16.41■□□□□ 0.22
DDX41-204ENST00000504807 LPIN2Q92539 896 aa16.41■□□□□ 0.22
DDX41-204ENST00000504807 ARHGAP45Q92619 1136 aa16.41■□□□□ 0.22
DDX41-204ENST00000504807 ARHGAP39Q9C0H5 1083 aa16.41■□□□□ 0.22
DDX41-204ENST00000504807 STAP2Q9UGK3 403 aa16.41■□□□□ 0.22
DDX41-204ENST00000504807 PPP2R3BQ9Y5P8 575 aa16.41■□□□□ 0.22
DDX41-204ENST00000504807 VCANP13611 3396 aa16.41■□□□□ 0.22
DDX41-204ENST00000504807 CIAO1O76071 339 aa16.4■□□□□ 0.22
DDX41-204ENST00000504807 ECM2O94769 699 aaPredicted RBP16.4■□□□□ 0.22
DDX41-204ENST00000504807 PHKA1P46020 1223 aa16.4■□□□□ 0.22
DDX41-204ENST00000504807 TAF1CQ15572 869 aaPredicted RBP16.4■□□□□ 0.22
DDX41-204ENST00000504807 APOBEC3HQ6NTF7 200 aaKnown RBP16.4■□□□□ 0.22
DDX41-204ENST00000504807 CNKSR2Q8WXI2 1034 aa16.4■□□□□ 0.22
DDX41-204ENST00000504807 CLUAP1Q96AJ1 413 aa16.4■□□□□ 0.22
DDX41-204ENST00000504807 STXBP5LQ9Y2K9 1186 aa16.4■□□□□ 0.22
DDX41-204ENST00000504807 TESPA1A2RU30 521 aaPredicted RBP16.39■□□□□ 0.21
DDX41-204ENST00000504807 MYO1BO43795 1136 aa16.39■□□□□ 0.21
DDX41-204ENST00000504807 IFIT1P09914 478 aaKnown RBP16.39■□□□□ 0.21
DDX41-204ENST00000504807 PRDX5P30044 214 aa16.39■□□□□ 0.21
DDX41-204ENST00000504807 ATP2B3Q16720 1220 aa16.39■□□□□ 0.21
DDX41-204ENST00000504807 FRAT1Q92837 279 aaPredicted RBP16.39■□□□□ 0.21
DDX41-204ENST00000504807 ZFYVE28Q9HCC9 887 aa16.39■□□□□ 0.21
DDX41-204ENST00000504807 COPRSQ9NQ92 184 aa16.39■□□□□ 0.21
DDX41-204ENST00000504807 FRAT2O75474 233 aaPredicted RBP16.38■□□□□ 0.21
DDX41-204ENST00000504807 SLC5A1P13866 664 aa16.38■□□□□ 0.21
DDX41-204ENST00000504807 HNRNPUQ00839 825 aaKnown RBP eCLIP16.38■□□□□ 0.21
DDX41-204ENST00000504807 DIXDC1Q155Q3 683 aa16.38■□□□□ 0.21
DDX41-204ENST00000504807 DIEXFQ68CQ4 756 aaKnown RBP16.38■□□□□ 0.21
DDX41-204ENST00000504807 ATF7IPQ6VMQ6 1270 aa16.38■□□□□ 0.21
DDX41-204ENST00000504807 UBE2Q1Q7Z7E8 422 aa16.38■□□□□ 0.21
DDX41-204ENST00000504807 MYH13Q9UKX3 1938 aa16.38■□□□□ 0.21
DDX41-204ENST00000504807 PNMA6EA0A0J9YXQ4 647 aa16.37■□□□□ 0.21
DDX41-204ENST00000504807 MTX1Q13505 466 aa16.37■□□□□ 0.21
DDX41-204ENST00000504807 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.37■□□□□ 0.21
DDX41-204ENST00000504807 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.37■□□□□ 0.21
DDX41-204ENST00000504807 TMEM57Q8N5G2 664 aa16.37■□□□□ 0.21
DDX41-204ENST00000504807 NKX2-3Q8TAU0 364 aa16.37■□□□□ 0.21
DDX41-204ENST00000504807 TBC1D22AQ8WUA7 517 aa16.37■□□□□ 0.21
DDX41-204ENST00000504807 ZDHHC15Q96MV8 337 aa16.37■□□□□ 0.21
DDX41-204ENST00000504807 ELP3Q9H9T3 547 aa16.37■□□□□ 0.21
DDX41-204ENST00000504807 EVI5O60447 810 aa16.36■□□□□ 0.21
DDX41-204ENST00000504807 RLBP1P12271 317 aa16.36■□□□□ 0.21
DDX41-204ENST00000504807 GJA8P48165 433 aa16.36■□□□□ 0.21
DDX41-204ENST00000504807 IREB2P48200 963 aaKnown RBP16.36■□□□□ 0.21
DDX41-204ENST00000504807 TIMM10P62072 90 aa16.36■□□□□ 0.21
DDX41-204ENST00000504807 HDLBPQ00341 1268 aaKnown RBP16.36■□□□□ 0.21
DDX41-204ENST00000504807 TFCP2Q12800 502 aa16.36■□□□□ 0.21
DDX41-204ENST00000504807 KIF22Q14807 665 aa16.36■□□□□ 0.21
DDX41-204ENST00000504807 BRI3BPQ8WY22 251 aa16.36■□□□□ 0.21
DDX41-204ENST00000504807 TEKT1Q969V4 418 aa16.36■□□□□ 0.21
DDX41-204ENST00000504807 OPTNQ96CV9 577 aa16.36■□□□□ 0.21
DDX41-204ENST00000504807 CEP126Q9P2H0 1117 aa16.36■□□□□ 0.21
DDX41-204ENST00000504807 FBXO3Q9UK99 471 aa16.36■□□□□ 0.21
DDX41-204ENST00000504807 SPTBN5Q9NRC6 3674 aaKnown RBP16.35■□□□□ 0.21
DDX41-204ENST00000504807 SRGAP3O43295 1099 aa16.35■□□□□ 0.21
DDX41-204ENST00000504807 IL15P40933 162 aaPredicted RBP16.35■□□□□ 0.21
DDX41-204ENST00000504807 SUPT20HL1Q3ZLR7 823 aa16.35■□□□□ 0.21
DDX41-204ENST00000504807 MS4A4AQ96JQ5 239 aa16.35■□□□□ 0.21
DDX41-204ENST00000504807 DAGLAQ9Y4D2 1042 aa16.35■□□□□ 0.21
DDX41-204ENST00000504807 CCL15-CCL14A0A0B4J2E2 113 aa16.34■□□□□ 0.21
DDX41-204ENST00000504807 UNCXA6NJT0 531 aa16.34■□□□□ 0.21
DDX41-204ENST00000504807 FARP2O94887 1054 aaPredicted RBP16.34■□□□□ 0.21
DDX41-204ENST00000504807 LACTBP83111 547 aaPredicted RBP16.34■□□□□ 0.21
DDX41-204ENST00000504807 NFIAQ12857 509 aa16.34■□□□□ 0.21
DDX41-204ENST00000504807 RASGRF1Q13972 1273 aa16.34■□□□□ 0.21
DDX41-204ENST00000504807 VGLL4Q14135 290 aa16.34■□□□□ 0.21
DDX41-204ENST00000504807 CCL15Q16663 113 aa16.34■□□□□ 0.21
DDX41-204ENST00000504807 CCDC102BQ68D86 513 aa16.34■□□□□ 0.21
DDX41-204ENST00000504807 ANKRD13AQ8IZ07 590 aa16.34■□□□□ 0.21
DDX41-204ENST00000504807 FAM43AQ8N2R8 423 aa16.34■□□□□ 0.21
DDX41-204ENST00000504807 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.34■□□□□ 0.21
DDX41-204ENST00000504807 ZNF384Q8TF68 577 aa16.34■□□□□ 0.21
DDX41-204ENST00000504807 MRIQ9BWK5 157 aa16.34■□□□□ 0.21
DDX41-204ENST00000504807 MTMR10Q9NXD2 777 aa16.34■□□□□ 0.21
DDX41-204ENST00000504807 GJB1P08034 283 aa16.33■□□□□ 0.2
DDX41-204ENST00000504807 GNAI3P08754 354 aa16.33■□□□□ 0.2
DDX41-204ENST00000504807 SLURP2P0DP57 97 aa16.33■□□□□ 0.2
DDX41-204ENST00000504807 CCL5P13501 91 aa16.33■□□□□ 0.2
DDX41-204ENST00000504807 TNFAIP1Q13829 316 aa16.33■□□□□ 0.2
DDX41-204ENST00000504807 GPR153Q6NV75 609 aa16.33■□□□□ 0.2
DDX41-204ENST00000504807 CDC42EP5Q6NZY7 148 aa16.33■□□□□ 0.2
DDX41-204ENST00000504807 HHIPL2Q6UWX4 724 aa16.33■□□□□ 0.2
DDX41-204ENST00000504807 PI16Q6UXB8 463 aa16.33■□□□□ 0.2
DDX41-204ENST00000504807 ZFPM1Q8IX07 1006 aa16.33■□□□□ 0.2
DDX41-204ENST00000504807 RNF208Q9H0X6 261 aa16.33■□□□□ 0.2
DDX41-204ENST00000504807 C1orf115Q9H7X2 142 aa16.33■□□□□ 0.2
DDX41-204ENST00000504807 PRDM6Q9NQX0 595 aa16.33■□□□□ 0.2
DDX41-204ENST00000504807 A0A1B0GUL7 405 aa16.32■□□□□ 0.2
DDX41-204ENST00000504807 WDR66Q8TBY9 1149 aa16.32■□□□□ 0.2
DDX41-204ENST00000504807 SALL1Q9NSC2 1324 aa16.32■□□□□ 0.2
DDX41-204ENST00000504807 FAM198AQ9UFP1 575 aa16.32■□□□□ 0.2
DDX41-204ENST00000504807 SUGT1Q9Y2Z0 365 aa16.32■□□□□ 0.2
DDX41-204ENST00000504807 SNCAIPQ9Y6H5 919 aa16.32■□□□□ 0.2
DDX41-204ENST00000504807 ZSWIM8A7E2V4 1837 aa16.31■□□□□ 0.2
DDX41-204ENST00000504807 RFX7Q2KHR2 1363 aa16.31■□□□□ 0.2
DDX41-204ENST00000504807 GRK4P32298 578 aa16.31■□□□□ 0.2
DDX41-204ENST00000504807 ZKSCAN4Q969J2 545 aaPredicted RBP16.31■□□□□ 0.2
DDX41-204ENST00000504807 XAGE2Q96GT9 111 aa16.31■□□□□ 0.2
DDX41-204ENST00000504807 BIN2Q9UBW5 565 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms