RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 PPP4CP60510 307 aa14.16□□□□□ -0.14
POLR2J3-210ENST00000504677 TRDNQ13061 729 aa14.16□□□□□ -0.14
POLR2J3-210ENST00000504677 DOK7Q18PE1 504 aa14.16□□□□□ -0.14
POLR2J3-210ENST00000504677 STRIP1Q5VSL9 837 aa14.16□□□□□ -0.14
POLR2J3-210ENST00000504677 TTLL5Q6EMB2 1281 aa14.16□□□□□ -0.14
POLR2J3-210ENST00000504677 DHX32Q7L7V1 743 aaKnown RBP14.16□□□□□ -0.14
POLR2J3-210ENST00000504677 RALYLQ86SE5 291 aaKnown RBP14.16□□□□□ -0.14
POLR2J3-210ENST00000504677 NCOA7Q8NI08 942 aa14.16□□□□□ -0.14
POLR2J3-210ENST00000504677 FAM163AQ96GL9 167 aaPredicted RBP14.16□□□□□ -0.14
POLR2J3-210ENST00000504677 INTS4Q96HW7 963 aaKnown RBP14.16□□□□□ -0.14
POLR2J3-210ENST00000504677 TMX3Q96JJ7 454 aa14.16□□□□□ -0.14
POLR2J3-210ENST00000504677 RNF41Q9H4P4 317 aaPredicted RBP14.16□□□□□ -0.14
POLR2J3-210ENST00000504677 CNNM2Q9H8M5 875 aa14.16□□□□□ -0.14
POLR2J3-210ENST00000504677 CIZ1Q9ULV3 898 aaPredicted RBP14.16□□□□□ -0.14
POLR2J3-210ENST00000504677 TAF6LQ9Y6J9 622 aa14.16□□□□□ -0.14
POLR2J3-210ENST00000504677 GAKO14976 1311 aa14.15□□□□□ -0.14
POLR2J3-210ENST00000504677 NAV1Q8NEY1 1877 aa14.15□□□□□ -0.14
POLR2J3-210ENST00000504677 PPIP5K2O43314 1243 aa14.15□□□□□ -0.14
POLR2J3-210ENST00000504677 PCP11498 1178 aaKnown RBP14.15□□□□□ -0.14
POLR2J3-210ENST00000504677 CUL4AQ13619 759 aa14.15□□□□□ -0.14
POLR2J3-210ENST00000504677 STOX1Q6ZVD7 989 aa14.15□□□□□ -0.14
POLR2J3-210ENST00000504677 CWC22Q9HCG8 908 aaKnown RBP14.15□□□□□ -0.14
POLR2J3-210ENST00000504677 AATFQ9NY61 560 aaKnown RBP eCLIP14.15□□□□□ -0.14
POLR2J3-210ENST00000504677 FER1L6Q2WGJ9 1857 aa14.14□□□□□ -0.15
POLR2J3-210ENST00000504677 ARFGEF1Q9Y6D6 1849 aa14.14□□□□□ -0.15
POLR2J3-210ENST00000504677 PRKAB2O43741 272 aa14.14□□□□□ -0.15
POLR2J3-210ENST00000504677 NT5C2P49902 561 aa14.14□□□□□ -0.15
POLR2J3-210ENST00000504677 HAND2P61296 217 aa14.14□□□□□ -0.15
POLR2J3-210ENST00000504677 DYNLL1P63167 89 aaKnown RBP14.14□□□□□ -0.15
POLR2J3-210ENST00000504677 AOC3Q16853 763 aa14.14□□□□□ -0.15
POLR2J3-210ENST00000504677 FBXL16Q8N461 479 aa14.14□□□□□ -0.15
POLR2J3-210ENST00000504677 FBXW7Q969H0 707 aa14.14□□□□□ -0.15
POLR2J3-210ENST00000504677 SLKQ9H2G2 1235 aaPredicted RBP14.14□□□□□ -0.15
POLR2J3-210ENST00000504677 DBNDD1Q9H9R9 158 aa14.14□□□□□ -0.15
POLR2J3-210ENST00000504677 SPON1Q9HCB6 807 aa14.14□□□□□ -0.15
POLR2J3-210ENST00000504677 ARPP21Q9UBL0 812 aaPredicted RBP14.14□□□□□ -0.15
POLR2J3-210ENST00000504677 ANAPC4Q9UJX5 808 aa14.14□□□□□ -0.15
POLR2J3-210ENST00000504677 MYO3BQ8WXR4 1341 aa14.14□□□□□ -0.15
POLR2J3-210ENST00000504677 GPR75-ASB3A0A0A6YYF3 556 aa14.13□□□□□ -0.15
POLR2J3-210ENST00000504677 USP17L3A6NCW0 530 aa14.13□□□□□ -0.15
POLR2J3-210ENST00000504677 USP17L4A6NCW7 530 aa14.13□□□□□ -0.15
POLR2J3-210ENST00000504677 CPA1P15085 419 aa14.13□□□□□ -0.15
POLR2J3-210ENST00000504677 MCM5P33992 734 aa14.13□□□□□ -0.15
POLR2J3-210ENST00000504677 FGD1P98174 961 aa14.13□□□□□ -0.15
POLR2J3-210ENST00000504677 HDLBPQ00341 1268 aaKnown RBP14.13□□□□□ -0.15
POLR2J3-210ENST00000504677 DIXDC1Q155Q3 683 aa14.13□□□□□ -0.15
POLR2J3-210ENST00000504677 USP17L1Q7RTZ2 530 aa14.13□□□□□ -0.15
POLR2J3-210ENST00000504677 AMOTL1Q8IY63 956 aa14.13□□□□□ -0.15
POLR2J3-210ENST00000504677 SDR42E1Q8WUS8 393 aa14.13□□□□□ -0.15
POLR2J3-210ENST00000504677 STAG1Q8WVM7 1258 aa14.13□□□□□ -0.15
POLR2J3-210ENST00000504677 KRT23Q9C075 422 aa14.13□□□□□ -0.15
POLR2J3-210ENST00000504677 CHMP5Q9NZZ3 219 aa14.13□□□□□ -0.15
POLR2J3-210ENST00000504677 FOCADQ5VW36 1801 aa14.13□□□□□ -0.15
POLR2J3-210ENST00000504677 SCN9AQ15858 1988 aa14.13□□□□□ -0.15
POLR2J3-210ENST00000504677 SLC3A2P08195 630 aaKnown RBP14.12□□□□□ -0.15
POLR2J3-210ENST00000504677 BTDP43251 543 aa14.12□□□□□ -0.15
POLR2J3-210ENST00000504677 EXOSC10Q01780 885 aaKnown RBP14.12□□□□□ -0.15
POLR2J3-210ENST00000504677 PPARAQ07869 468 aa14.12□□□□□ -0.15
POLR2J3-210ENST00000504677 GRIK5Q16478 980 aa14.12□□□□□ -0.15
POLR2J3-210ENST00000504677 AKNAD1Q5T1N1 836 aa14.12□□□□□ -0.15
POLR2J3-210ENST00000504677 HHIPL2Q6UWX4 724 aa14.12□□□□□ -0.15
POLR2J3-210ENST00000504677 TBC1D10CQ8IV04 446 aa14.12□□□□□ -0.15
POLR2J3-210ENST00000504677 MB21D2Q8IYB1 491 aaPredicted RBP14.12□□□□□ -0.15
POLR2J3-210ENST00000504677 CHMP4CQ96CF2 233 aa14.12□□□□□ -0.15
POLR2J3-210ENST00000504677 MRIQ9BWK5 157 aa14.12□□□□□ -0.15
POLR2J3-210ENST00000504677 AGXT2Q9BYV1 514 aa14.12□□□□□ -0.15
POLR2J3-210ENST00000504677 DCP1AQ9NPI6 582 aaPredicted RBP14.12□□□□□ -0.15
POLR2J3-210ENST00000504677 PPP1R1BQ9UD71 204 aaPredicted RBP14.12□□□□□ -0.15
POLR2J3-210ENST00000504677 TTF2Q9UNY4 1162 aaKnown RBP14.12□□□□□ -0.15
POLR2J3-210ENST00000504677 DDX60LQ5H9U9 1706 aaKnown RBP14.12□□□□□ -0.15
POLR2J3-210ENST00000504677 CDK5RAP2Q96SN8 1893 aa14.12□□□□□ -0.15
POLR2J3-210ENST00000504677 BAZ2AQ9UIF9 1905 aaKnown RBP14.11□□□□□ -0.15
POLR2J3-210ENST00000504677 DDIT3P35638 169 aa14.11□□□□□ -0.15
POLR2J3-210ENST00000504677 USP5P45974 858 aa14.11□□□□□ -0.15
POLR2J3-210ENST00000504677 TOB2Q14106 344 aaPredicted RBP14.11□□□□□ -0.15
POLR2J3-210ENST00000504677 SBK1Q52WX2 424 aa14.11□□□□□ -0.15
POLR2J3-210ENST00000504677 DACT2Q5SW24 774 aa14.11□□□□□ -0.15
POLR2J3-210ENST00000504677 MFSD6Q6ZSS7 791 aa14.11□□□□□ -0.15
POLR2J3-210ENST00000504677 Q6ZUG5 572 aa14.11□□□□□ -0.15
POLR2J3-210ENST00000504677 NOL8Q76FK4 1167 aaKnown RBP14.11□□□□□ -0.15
POLR2J3-210ENST00000504677 KLHL34Q8N239 644 aa14.11□□□□□ -0.15
POLR2J3-210ENST00000504677 LARGE2Q8N3Y3 721 aa14.11□□□□□ -0.15
POLR2J3-210ENST00000504677 CERS5Q8N5B7 392 aa14.11□□□□□ -0.15
POLR2J3-210ENST00000504677 SPRYD3Q8NCJ5 442 aa14.11□□□□□ -0.15
POLR2J3-210ENST00000504677 TEKT1Q969V4 418 aa14.11□□□□□ -0.15
POLR2J3-210ENST00000504677 MTA3Q9BTC8 594 aa14.11□□□□□ -0.15
POLR2J3-210ENST00000504677 NBPF3Q9H094 633 aa14.11□□□□□ -0.15
POLR2J3-210ENST00000504677 TAOK3Q9H2K8 898 aa14.11□□□□□ -0.15
POLR2J3-210ENST00000504677 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.11□□□□□ -0.15
POLR2J3-210ENST00000504677 LTBP3Q9NS15 1303 aa14.11□□□□□ -0.15
POLR2J3-210ENST00000504677 IARSP41252 1262 aaKnown RBP14.1□□□□□ -0.15
POLR2J3-210ENST00000504677 NIM1KQ8IY84 436 aa14.1□□□□□ -0.15
POLR2J3-210ENST00000504677 DAGLAQ9Y4D2 1042 aa14.1□□□□□ -0.15
POLR2J3-210ENST00000504677 ROBO3Q96MS0 1386 aa14.09□□□□□ -0.15
POLR2J3-210ENST00000504677 ECM29Q5VYK3 1845 aa14.09□□□□□ -0.15
POLR2J3-210ENST00000504677 PRC1O43663 620 aa14.09□□□□□ -0.15
POLR2J3-210ENST00000504677 TEX11Q8IYF3 940 aa14.09□□□□□ -0.15
POLR2J3-210ENST00000504677 SH3RF3Q8TEJ3 882 aaPredicted RBP14.09□□□□□ -0.15
POLR2J3-210ENST00000504677 TMEM87BQ96K49 555 aa14.09□□□□□ -0.15
POLR2J3-210ENST00000504677 ZNF277Q9NRM2 450 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms