RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-253ENST00000504651 APPBP2Q92624 585 aa16.84■□□□□ 0.29
DDR1-253ENST00000504651 ZBED3Q96IU2 234 aaPredicted RBP16.84■□□□□ 0.29
DDR1-253ENST00000504651 PRMT6Q96LA8 375 aaPredicted RBP16.84■□□□□ 0.29
DDR1-253ENST00000504651 DIAPH3Q9NSV4 1193 aa16.84■□□□□ 0.29
DDR1-253ENST00000504651 AATFQ9NY61 560 aaKnown RBP eCLIP16.84■□□□□ 0.29
DDR1-253ENST00000504651 NAV1Q8NEY1 1877 aa16.84■□□□□ 0.29
DDR1-253ENST00000504651 GPR75-ASB3A0A0A6YYF3 556 aa16.83■□□□□ 0.28
DDR1-253ENST00000504651 HIP1O00291 1037 aa16.83■□□□□ 0.28
DDR1-253ENST00000504651 BAG3O95817 575 aa16.83■□□□□ 0.28
DDR1-253ENST00000504651 HIRAP54198 1017 aaPredicted RBP16.83■□□□□ 0.28
DDR1-253ENST00000504651 APOBEC3HQ6NTF7 200 aaKnown RBP16.83■□□□□ 0.28
DDR1-253ENST00000504651 TDRD3Q9H7E2 651 aaKnown RBP16.83■□□□□ 0.28
DDR1-253ENST00000504651 GGA3Q9NZ52 723 aa16.83■□□□□ 0.28
DDR1-253ENST00000504651 TMOD2Q9NZR1 351 aa16.83■□□□□ 0.28
DDR1-253ENST00000504651 ASTN2O75129 1339 aaPredicted RBP16.82■□□□□ 0.28
DDR1-253ENST00000504651 MAGEB6P1A0A0J9YX57 407 aa16.82■□□□□ 0.28
DDR1-253ENST00000504651 CLRN2A0PK11 232 aa16.82■□□□□ 0.28
DDR1-253ENST00000504651 PLCG2P16885 1265 aa16.82■□□□□ 0.28
DDR1-253ENST00000504651 DYNLL1P63167 89 aaKnown RBP16.82■□□□□ 0.28
DDR1-253ENST00000504651 TICAM2Q86XR7 235 aa16.82■□□□□ 0.28
DDR1-253ENST00000504651 CERS3Q8IU89 383 aa16.82■□□□□ 0.28
DDR1-253ENST00000504651 ZNF784Q8NCA9 323 aaPredicted RBP16.82■□□□□ 0.28
DDR1-253ENST00000504651 VEZTQ9HBM0 779 aa16.82■□□□□ 0.28
DDR1-253ENST00000504651 CLEC11AQ9Y240 323 aa16.82■□□□□ 0.28
DDR1-253ENST00000504651 NMIQ13287 307 aaPredicted RBP16.81■□□□□ 0.28
DDR1-253ENST00000504651 SPDYE2Q495Y8 402 aa16.81■□□□□ 0.28
DDR1-253ENST00000504651 ZMYM1Q5SVZ6 1142 aa16.81■□□□□ 0.28
DDR1-253ENST00000504651 ANGEL2Q5VTE6 544 aaKnown RBP16.81■□□□□ 0.28
DDR1-253ENST00000504651 CDC42EP5Q6NZY7 148 aa16.81■□□□□ 0.28
DDR1-253ENST00000504651 AIDAQ96BJ3 306 aa16.81■□□□□ 0.28
DDR1-253ENST00000504651 USP40Q9NVE5 1235 aa16.81■□□□□ 0.28
DDR1-253ENST00000504651 ZNF70Q9UC06 446 aaPredicted RBP16.81■□□□□ 0.28
DDR1-253ENST00000504651 DDX60LQ5H9U9 1706 aaKnown RBP16.8■□□□□ 0.28
DDR1-253ENST00000504651 A0A0D9SFI3 127 aa16.8■□□□□ 0.28
DDR1-253ENST00000504651 M0R2C6 588 aa16.8■□□□□ 0.28
DDR1-253ENST00000504651 MBD4O95243 580 aa16.8■□□□□ 0.28
DDR1-253ENST00000504651 POTEIP0CG38 1075 aa16.8■□□□□ 0.28
DDR1-253ENST00000504651 POTEJP0CG39 1038 aa16.8■□□□□ 0.28
DDR1-253ENST00000504651 LDHDQ86WU2 507 aa16.8■□□□□ 0.28
DDR1-253ENST00000504651 TEX11Q8IYF3 940 aa16.8■□□□□ 0.28
DDR1-253ENST00000504651 LCORLQ8N3X6 602 aa16.8■□□□□ 0.28
DDR1-253ENST00000504651 SH3RF3Q8TEJ3 882 aaPredicted RBP16.8■□□□□ 0.28
DDR1-253ENST00000504651 OSBP2Q969R2 916 aa16.8■□□□□ 0.28
DDR1-253ENST00000504651 FAM227BQ96M60 508 aa16.8■□□□□ 0.28
DDR1-253ENST00000504651 PUS7LQ9H0K6 701 aaKnown RBP16.8■□□□□ 0.28
DDR1-253ENST00000504651 ARMT1Q9H993 441 aa16.8■□□□□ 0.28
DDR1-253ENST00000504651 PITPNM2Q9BZ72 1349 aa16.79■□□□□ 0.28
DDR1-253ENST00000504651 KIF3CO14782 793 aa16.79■□□□□ 0.28
DDR1-253ENST00000504651 CACNB3P54284 484 aa16.79■□□□□ 0.28
DDR1-253ENST00000504651 RHBDL3P58872 404 aa16.79■□□□□ 0.28
DDR1-253ENST00000504651 PPP4CP60510 307 aa16.79■□□□□ 0.28
DDR1-253ENST00000504651 APOBEC3FQ8IUX4 373 aaKnown RBP16.79■□□□□ 0.28
DDR1-253ENST00000504651 ZC3H15Q8WU90 426 aaKnown RBP16.79■□□□□ 0.28
DDR1-253ENST00000504651 DCPSQ96C86 337 aaKnown RBP16.79■□□□□ 0.28
DDR1-253ENST00000504651 SEC62Q99442 399 aaKnown RBP16.79■□□□□ 0.28
DDR1-253ENST00000504651 RIOK1Q9BRS2 568 aaKnown RBP16.79■□□□□ 0.28
DDR1-253ENST00000504651 HELLSQ9NRZ9 838 aa16.79■□□□□ 0.28
DDR1-253ENST00000504651 GPAA1O43292 621 aa16.78■□□□□ 0.28
DDR1-253ENST00000504651 CDC45O75419 566 aa16.78■□□□□ 0.28
DDR1-253ENST00000504651 CHMLP26374 656 aa16.78■□□□□ 0.28
DDR1-253ENST00000504651 CWC27Q6UX04 472 aaKnown RBP16.78■□□□□ 0.28
DDR1-253ENST00000504651 CRNKL1Q9BZJ0 848 aaKnown RBP16.78■□□□□ 0.28
DDR1-253ENST00000504651 LAMB1P07942 1786 aa16.78■□□□□ 0.28
DDR1-253ENST00000504651 MYH1P12882 1939 aa16.78■□□□□ 0.28
DDR1-253ENST00000504651 RAD50Q92878 1312 aa16.77■□□□□ 0.28
DDR1-253ENST00000504651 POLR2AP24928 1970 aaKnown RBP16.77■□□□□ 0.28
DDR1-253ENST00000504651 TCP10L2B9ZVM9 353 aa16.77■□□□□ 0.28
DDR1-253ENST00000504651 TNNI2P48788 182 aa16.77■□□□□ 0.28
DDR1-253ENST00000504651 PICALMQ13492 652 aa16.77■□□□□ 0.28
DDR1-253ENST00000504651 TNFAIP1Q13829 316 aa16.77■□□□□ 0.28
DDR1-253ENST00000504651 MCMDC2Q4G0Z9 681 aa16.77■□□□□ 0.28
DDR1-253ENST00000504651 CASC1Q6TDU7 716 aa16.77■□□□□ 0.28
DDR1-253ENST00000504651 CCDC129Q6ZRS4 1044 aa16.77■□□□□ 0.28
DDR1-253ENST00000504651 RUFY2Q8WXA3 655 aa16.77■□□□□ 0.28
DDR1-253ENST00000504651 CCDC171Q6TFL3 1326 aa16.76■□□□□ 0.27
DDR1-253ENST00000504651 WDHD1O75717 1129 aaPredicted RBP16.76■□□□□ 0.27
DDR1-253ENST00000504651 USP5P45974 858 aa16.76■□□□□ 0.27
DDR1-253ENST00000504651 SULF1Q8IWU6 871 aa16.76■□□□□ 0.27
DDR1-253ENST00000504651 TGFBRAP1Q8WUH2 860 aa16.76■□□□□ 0.27
DDR1-253ENST00000504651 PGAP2Q9UHJ9 254 aa16.76■□□□□ 0.27
DDR1-253ENST00000504651 SCAF8Q9UPN6 1271 aaKnown RBP16.76■□□□□ 0.27
DDR1-253ENST00000504651 BAZ2AQ9UIF9 1905 aaKnown RBP16.76■□□□□ 0.27
DDR1-253ENST00000504651 FLT1P17948 1338 aa16.75■□□□□ 0.27
DDR1-253ENST00000504651 GNAT2P19087 354 aa16.75■□□□□ 0.27
DDR1-253ENST00000504651 MFAP1P55081 439 aaKnown RBP16.75■□□□□ 0.27
DDR1-253ENST00000504651 TCP10Q12799 353 aa16.75■□□□□ 0.27
DDR1-253ENST00000504651 NFIAQ12857 509 aa16.75■□□□□ 0.27
DDR1-253ENST00000504651 FKBP1CQ5VVH2 108 aa16.75■□□□□ 0.27
DDR1-253ENST00000504651 MAP1SQ66K74 1059 aaPredicted RBP16.75■□□□□ 0.27
DDR1-253ENST00000504651 CHADLQ6NUI6 762 aa16.75■□□□□ 0.27
DDR1-253ENST00000504651 KRT26Q7Z3Y9 468 aa16.75■□□□□ 0.27
DDR1-253ENST00000504651 ZNF589Q86UQ0 364 aaPredicted RBP16.75■□□□□ 0.27
DDR1-253ENST00000504651 MAPKAPK5Q8IW41 473 aa16.75■□□□□ 0.27
DDR1-253ENST00000504651 SDR42E1Q8WUS8 393 aa16.75■□□□□ 0.27
DDR1-253ENST00000504651 STRBPQ96SI9 672 aaKnown RBP16.75■□□□□ 0.27
DDR1-253ENST00000504651 IDI2Q9BXS1 227 aa16.75■□□□□ 0.27
DDR1-253ENST00000504651 DDX4Q9NQI0 724 aaKnown RBP16.75■□□□□ 0.27
DDR1-253ENST00000504651 SLC4A4Q9Y6R1 1079 aa16.75■□□□□ 0.27
DDR1-253ENST00000504651 CNTNAP1P78357 1384 aa16.75■□□□□ 0.27
DDR1-253ENST00000504651 ADM5C9JUS6 153 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms