RNA–Protein interactions for RNA: ENST00000504263.1

PCAT4-201, prostate cancer associated transcript 4, humanhuman

TSL 1 (best) BASIC

Gene PCAT4, Length 2,091 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT4-201ENST00000504263 CTCFLQ8NI51 663 aaPredicted RBP4.07□□□□□ -1.76
PCAT4-201ENST00000504263 UBXN4Q92575 508 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 NGLY1Q96IV0 654 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 TMX3Q96JJ7 454 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 PRAM1Q96QH2 718 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 MMTAG2Q9BU76 263 aaKnown RBP4.07□□□□□ -1.76
PCAT4-201ENST00000504263 FUT8Q9BYC5 575 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 ARFGAP3Q9NP61 516 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 BATF3Q9NR55 127 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 PNMA3Q9UL41 463 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 NRXN1Q9ULB1 1477 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 SRGAP3O43295 1099 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 EPB41L2O43491 1005 aaKnown RBP4.07□□□□□ -1.76
PCAT4-201ENST00000504263 SASH3O75995 380 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 NEBLO76041 1014 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 SNUPNO95149 360 aaKnown RBP4.07□□□□□ -1.76
PCAT4-201ENST00000504263 ADH1BP00325 375 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 IMPDH2P12268 514 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 RXRBP28702 533 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 PSME1Q06323 249 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 FZD5Q13467 585 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 RCSD1Q6JBY9 416 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 LRRC31Q6UY01 552 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 RBM43Q6ZSC3 357 aaKnown RBP4.07□□□□□ -1.76
PCAT4-201ENST00000504263 SPATS2Q86XZ4 545 aaKnown RBP4.07□□□□□ -1.76
PCAT4-201ENST00000504263 ZGPATQ8N5A5 531 aaKnown RBP4.07□□□□□ -1.76
PCAT4-201ENST00000504263 MAB21L3Q8N8X9 362 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 CACTINQ8WUQ7 758 aaKnown RBP4.07□□□□□ -1.76
PCAT4-201ENST00000504263 XAGE2Q96GT9 111 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 CABS1Q96KC9 395 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 C8orf37Q96NL8 207 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 TESK2Q96S53 571 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 BAG1Q99933 345 aaPredicted RBP4.07□□□□□ -1.76
PCAT4-201ENST00000504263 LARP6Q9BRS8 491 aaKnown RBP4.07□□□□□ -1.76
PCAT4-201ENST00000504263 PRR14Q9BWN1 585 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 ZBTB40Q9NUA8 1239 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 PDRG1Q9NUG6 133 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 SMC3Q9UQE7 1217 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 ATP6V1DQ9Y5K8 247 aa4.07□□□□□ -1.76
PCAT4-201ENST00000504263 KNDC1Q76NI1 1749 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 CDC42BPGQ6DT37 1551 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 PNPLA6Q8IY17 1366 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 IL16Q14005 1332 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 H7C1W4 665 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 APAF1O14727 1248 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 ADAMTS2O95450 1211 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 TUBBP07437 444 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 PECAM1P16284 738 aaPredicted RBP4.06□□□□□ -1.76
PCAT4-201ENST00000504263 NF2P35240 595 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 GSDMDP57764 484 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 SCRN1Q12765 414 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 LRMPQ12912 555 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 CDC37Q16543 378 aaPredicted RBP4.06□□□□□ -1.76
PCAT4-201ENST00000504263 LRRFIP1Q32MZ4 808 aaKnown RBP4.06□□□□□ -1.76
PCAT4-201ENST00000504263 RINLQ6ZS11 566 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 KRT28Q7Z3Y7 464 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 BRAPQ7Z569 592 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 SLF2Q8IX21 1173 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 RBM12BQ8IXT5 1001 aaKnown RBP4.06□□□□□ -1.76
PCAT4-201ENST00000504263 RABGGTAQ92696 567 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 KCNB2Q92953 911 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 QTRT2Q9H974 415 aaKnown RBP4.06□□□□□ -1.76
PCAT4-201ENST00000504263 CHCHD3Q9NX63 227 aaKnown RBP4.06□□□□□ -1.76
PCAT4-201ENST00000504263 CPSF2Q9P2I0 782 aaKnown RBP4.06□□□□□ -1.76
PCAT4-201ENST00000504263 IMPACTQ9P2X3 320 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 DNAI1Q9UI46 699 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 LRP6O75581 1613 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 RGPD8O14715 1765 aaPredicted RBP4.06□□□□□ -1.76
PCAT4-201ENST00000504263 AFF2P51816 1311 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 A6NNZ2 444 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 NBPF26B4DH59 902 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 U2SURPO15042 1029 aaKnown RBP4.06□□□□□ -1.76
PCAT4-201ENST00000504263 SHOX2O60902 331 aaPredicted RBP4.06□□□□□ -1.76
PCAT4-201ENST00000504263 GADD45BO75293 160 aaPredicted RBP4.06□□□□□ -1.76
PCAT4-201ENST00000504263 FSBPO95073 299 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 USP5P45974 858 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 PRSS12P56730 875 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 CCZ1BP86790 482 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 CCZ1P86791 482 aaPredicted RBP4.06□□□□□ -1.76
PCAT4-201ENST00000504263 APOBRQ0VD83 1088 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 PLCB4Q15147 1175 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 TBC1D25Q3MII6 688 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 TUBB8Q3ZCM7 444 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 AMOTQ4VCS5 1084 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 INTS3Q68E01 1043 aaKnown RBP4.06□□□□□ -1.76
PCAT4-201ENST00000504263 SDCCAG8Q86SQ7 713 aaPredicted RBP4.06□□□□□ -1.76
PCAT4-201ENST00000504263 KIAA1328Q86T90 577 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 SPC24Q8NBT2 197 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 SNIP1Q8TAD8 396 aaKnown RBP4.06□□□□□ -1.76
PCAT4-201ENST00000504263 FAM71BQ8TC56 605 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 KAT2BQ92831 832 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 SLC6A16Q9GZN6 736 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 ACBD3Q9H3P7 528 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 ZCCHC17Q9NP64 241 aaKnown RBP4.06□□□□□ -1.76
PCAT4-201ENST00000504263 EMILIN3Q9NT22 766 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 NUB1Q9Y5A7 615 aa4.06□□□□□ -1.76
PCAT4-201ENST00000504263 TTC21BQ7Z4L5 1316 aa4.05□□□□□ -1.76
PCAT4-201ENST00000504263 MINK1Q8N4C8 1332 aaPredicted RBP4.05□□□□□ -1.76
PCAT4-201ENST00000504263 CAND2O75155 1236 aa4.05□□□□□ -1.76
PCAT4-201ENST00000504263 CDKL5O76039 1030 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 221.2 ms