RNA–Protein interactions for RNA: ENST00000504136.1

SSBP2-202, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 927 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-202ENST00000504136 CHRNDQ07001 517 aa11.19□□□□□ -0.62
SSBP2-202ENST00000504136 LMBR1LQ6UX01 489 aa11.19□□□□□ -0.62
SSBP2-202ENST00000504136 USP17L1Q7RTZ2 530 aa11.19□□□□□ -0.62
SSBP2-202ENST00000504136 HHIPL1Q96JK4 782 aa11.19□□□□□ -0.62
SSBP2-202ENST00000504136 MPHOSPH8Q99549 860 aa11.19□□□□□ -0.62
SSBP2-202ENST00000504136 MTRQ99707 1265 aa11.19□□□□□ -0.62
SSBP2-202ENST00000504136 PCNTO95613 3336 aa11.19□□□□□ -0.62
SSBP2-202ENST00000504136 ARAP2Q8WZ64 1704 aa11.18□□□□□ -0.62
SSBP2-202ENST00000504136 MYO3BQ8WXR4 1341 aa11.18□□□□□ -0.62
SSBP2-202ENST00000504136 EGFRP00533 1210 aa11.18□□□□□ -0.62
SSBP2-202ENST00000504136 NBPF7P0C2Y1 421 aaPredicted RBP11.18□□□□□ -0.62
SSBP2-202ENST00000504136 DACT2Q5SW24 774 aa11.18□□□□□ -0.62
SSBP2-202ENST00000504136 STRIP1Q5VSL9 837 aa11.18□□□□□ -0.62
SSBP2-202ENST00000504136 CDC37L1Q7L3B6 337 aa11.18□□□□□ -0.62
SSBP2-202ENST00000504136 TXNRD3Q86VQ6 643 aa11.18□□□□□ -0.62
SSBP2-202ENST00000504136 SUCLG2Q96I99 432 aa11.18□□□□□ -0.62
SSBP2-202ENST00000504136 C9orf78Q9NZ63 289 aaPredicted RBP11.18□□□□□ -0.62
SSBP2-202ENST00000504136 TLL2Q9Y6L7 1015 aa11.18□□□□□ -0.62
SSBP2-202ENST00000504136 PITPNM2Q9BZ72 1349 aa11.17□□□□□ -0.62
SSBP2-202ENST00000504136 TRAF5O00463 557 aa11.17□□□□□ -0.62
SSBP2-202ENST00000504136 SSTR3P32745 418 aaPredicted RBP11.17□□□□□ -0.62
SSBP2-202ENST00000504136 FMR1Q06787 632 aaKnown RBP eCLIP11.17□□□□□ -0.62
SSBP2-202ENST00000504136 KIF4BQ2VIQ3 1234 aa11.17□□□□□ -0.62
SSBP2-202ENST00000504136 ANKRD44Q8N8A2 993 aa11.17□□□□□ -0.62
SSBP2-202ENST00000504136 GLIS2Q9BZE0 524 aaPredicted RBP11.17□□□□□ -0.62
SSBP2-202ENST00000504136 USP44Q9H0E7 712 aa11.17□□□□□ -0.62
SSBP2-202ENST00000504136 MKRN1Q9UHC7 482 aaKnown RBP11.17□□□□□ -0.62
SSBP2-202ENST00000504136 ECM29Q5VYK3 1845 aa11.16□□□□□ -0.62
SSBP2-202ENST00000504136 HSPA1AP0DMV8 641 aaKnown RBP11.16□□□□□ -0.62
SSBP2-202ENST00000504136 HSPA1BP0DMV9 641 aaKnown RBP11.16□□□□□ -0.62
SSBP2-202ENST00000504136 IL1R1P14778 569 aa11.16□□□□□ -0.62
SSBP2-202ENST00000504136 KLRK1P26718 216 aa11.16□□□□□ -0.62
SSBP2-202ENST00000504136 VEGFBP49765 207 aa11.16□□□□□ -0.62
SSBP2-202ENST00000504136 FKBP1AP62942 108 aaKnown RBP11.16□□□□□ -0.62
SSBP2-202ENST00000504136 CCDC57Q2TAC2 916 aa11.16□□□□□ -0.62
SSBP2-202ENST00000504136 DEFB115Q30KQ5 88 aa11.16□□□□□ -0.62
SSBP2-202ENST00000504136 BLOC1S3Q6QNY0 202 aa11.16□□□□□ -0.62
SSBP2-202ENST00000504136 SLC4A10Q6U841 1118 aa11.16□□□□□ -0.62
SSBP2-202ENST00000504136 SAPCD2Q86UD0 394 aa11.16□□□□□ -0.62
SSBP2-202ENST00000504136 PCDHB3Q9Y5E6 796 aa11.16□□□□□ -0.62
SSBP2-202ENST00000504136 USP17L8P0C7I0 530 aa11.15□□□□□ -0.62
SSBP2-202ENST00000504136 TBC1D10BQ4KMP7 808 aaPredicted RBP11.15□□□□□ -0.62
SSBP2-202ENST00000504136 LDHAL6AQ6ZMR3 332 aa11.15□□□□□ -0.62
SSBP2-202ENST00000504136 ARHGAP45Q92619 1136 aa11.15□□□□□ -0.62
SSBP2-202ENST00000504136 ZBED3Q96IU2 234 aaPredicted RBP11.15□□□□□ -0.62
SSBP2-202ENST00000504136 BICC1Q9H694 974 aaKnown RBP11.15□□□□□ -0.62
SSBP2-202ENST00000504136 IL21Q9HBE4 155 aa11.15□□□□□ -0.62
SSBP2-202ENST00000504136 CD209Q9NNX6 404 aa11.15□□□□□ -0.62
SSBP2-202ENST00000504136 SMC4Q9NTJ3 1288 aa11.15□□□□□ -0.62
SSBP2-202ENST00000504136 RIPOR2Q9Y4F9 1068 aa11.15□□□□□ -0.62
SSBP2-202ENST00000504136 CELF2O95319 508 aaKnown RBP11.14□□□□□ -0.63
SSBP2-202ENST00000504136 MS4A1P11836 297 aa11.14□□□□□ -0.63
SSBP2-202ENST00000504136 RARSP54136 660 aaKnown RBP11.14□□□□□ -0.63
SSBP2-202ENST00000504136 KCNC4Q03721 635 aa11.14□□□□□ -0.63
SSBP2-202ENST00000504136 FUT2Q10981 343 aa11.14□□□□□ -0.63
SSBP2-202ENST00000504136 UBE4AQ14139 1066 aa11.14□□□□□ -0.63
SSBP2-202ENST00000504136 VGLL2Q8N8G2 317 aa11.14□□□□□ -0.63
SSBP2-202ENST00000504136 MYOZ2Q9NPC6 264 aa11.14□□□□□ -0.63
SSBP2-202ENST00000504136 GGA3Q9NZ52 723 aa11.14□□□□□ -0.63
SSBP2-202ENST00000504136 PAPPA2Q9BXP8 1791 aa11.13□□□□□ -0.63
SSBP2-202ENST00000504136 FAM205AQ6ZU69 1335 aa11.13□□□□□ -0.63
SSBP2-202ENST00000504136 MROH5Q6ZUA9 1318 aa11.13□□□□□ -0.63
SSBP2-202ENST00000504136 KIF16BQ96L93 1317 aa11.13□□□□□ -0.63
SSBP2-202ENST00000504136 WDR33Q9C0J8 1336 aaKnown RBP11.13□□□□□ -0.63
SSBP2-202ENST00000504136 SNAP23O00161 211 aa11.13□□□□□ -0.63
SSBP2-202ENST00000504136 TAF5LO75529 589 aa11.13□□□□□ -0.63
SSBP2-202ENST00000504136 ECE1P42892 770 aa11.13□□□□□ -0.63
SSBP2-202ENST00000504136 RFX5P48382 616 aaPredicted RBP11.13□□□□□ -0.63
SSBP2-202ENST00000504136 COPS2P61201 443 aa11.13□□□□□ -0.63
SSBP2-202ENST00000504136 DIEXFQ68CQ4 756 aaKnown RBP11.13□□□□□ -0.63
SSBP2-202ENST00000504136 KRT26Q7Z3Y9 468 aa11.13□□□□□ -0.63
SSBP2-202ENST00000504136 MTMR14Q8NCE2 650 aa11.13□□□□□ -0.63
SSBP2-202ENST00000504136 ZNF516Q92618 1163 aa11.13□□□□□ -0.63
SSBP2-202ENST00000504136 ZNF594Q96JF6 807 aaPredicted RBP11.13□□□□□ -0.63
SSBP2-202ENST00000504136 API5Q9BZZ5 524 aaKnown RBP11.13□□□□□ -0.63
SSBP2-202ENST00000504136 ABT1Q9ULW3 272 aaKnown RBP11.13□□□□□ -0.63
SSBP2-202ENST00000504136 CHMP3Q9Y3E7 222 aa11.13□□□□□ -0.63
SSBP2-202ENST00000504136 COL1A1P02452 1464 aaPredicted RBP11.12□□□□□ -0.63
SSBP2-202ENST00000504136 MAP2K2P36507 400 aa11.12□□□□□ -0.63
SSBP2-202ENST00000504136 KCNJ4P48050 445 aa11.12□□□□□ -0.63
SSBP2-202ENST00000504136 TTLL5Q6EMB2 1281 aa11.12□□□□□ -0.63
SSBP2-202ENST00000504136 ZNF804AQ7Z570 1209 aa11.12□□□□□ -0.63
SSBP2-202ENST00000504136 USP48Q86UV5 1035 aa11.12□□□□□ -0.63
SSBP2-202ENST00000504136 HELBQ8NG08 1087 aaPredicted RBP11.12□□□□□ -0.63
SSBP2-202ENST00000504136 TDRD7Q8NHU6 1098 aaKnown RBP11.12□□□□□ -0.63
SSBP2-202ENST00000504136 DCPSQ96C86 337 aaKnown RBP11.12□□□□□ -0.63
SSBP2-202ENST00000504136 CAPNS2Q96L46 248 aa11.12□□□□□ -0.63
SSBP2-202ENST00000504136 PUS3Q9BZE2 481 aaKnown RBP11.12□□□□□ -0.63
SSBP2-202ENST00000504136 CNNM1Q9NRU3 951 aa11.12□□□□□ -0.63
SSBP2-202ENST00000504136 ASTN2O75129 1339 aaPredicted RBP11.11□□□□□ -0.63
SSBP2-202ENST00000504136 LAMB1P07942 1786 aa11.11□□□□□ -0.63
SSBP2-202ENST00000504136 ADM5C9JUS6 153 aa11.11□□□□□ -0.63
SSBP2-202ENST00000504136 WNT10BO00744 389 aa11.11□□□□□ -0.63
SSBP2-202ENST00000504136 RGS20O76081 388 aa11.11□□□□□ -0.63
SSBP2-202ENST00000504136 SASH1O94885 1247 aa11.11□□□□□ -0.63
SSBP2-202ENST00000504136 MAP2K1Q02750 393 aaPredicted RBP11.11□□□□□ -0.63
SSBP2-202ENST00000504136 SCARF1Q14162 830 aa11.11□□□□□ -0.63
SSBP2-202ENST00000504136 PUS10Q3MIT2 529 aaKnown RBP11.11□□□□□ -0.63
SSBP2-202ENST00000504136 TAF7LQ5H9L4 462 aa11.11□□□□□ -0.63
SSBP2-202ENST00000504136 MORN1Q5T089 497 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms