RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 PTPN22Q9Y2R2 807 aa14.8□□□□□ -0.04
MED28-203ENST00000503945 CACNB3P54284 484 aa14.79□□□□□ -0.04
MED28-203ENST00000503945 TFCP2Q12800 502 aa14.79□□□□□ -0.04
MED28-203ENST00000503945 GORABQ5T7V8 394 aa14.79□□□□□ -0.04
MED28-203ENST00000503945 CCDC102BQ68D86 513 aa14.79□□□□□ -0.04
MED28-203ENST00000503945 CDAN1Q8IWY9 1227 aa14.79□□□□□ -0.04
MED28-203ENST00000503945 OPTNQ96CV9 577 aa14.79□□□□□ -0.04
MED28-203ENST00000503945 OTOFQ9HC10 1997 aa14.79□□□□□ -0.04
MED28-203ENST00000503945 KIAA0100Q14667 2235 aaKnown RBP14.78□□□□□ -0.04
MED28-203ENST00000503945 PHKA1P46020 1223 aa14.78□□□□□ -0.04
MED28-203ENST00000503945 SP3Q02447 781 aa14.78□□□□□ -0.04
MED28-203ENST00000503945 SPTY2D1Q68D10 685 aaPredicted RBP14.78□□□□□ -0.04
MED28-203ENST00000503945 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.78□□□□□ -0.04
MED28-203ENST00000503945 SLF2Q8IX21 1173 aa14.78□□□□□ -0.04
MED28-203ENST00000503945 FTSJ3Q8IY81 847 aaKnown RBP14.78□□□□□ -0.04
MED28-203ENST00000503945 TMEM57Q8N5G2 664 aa14.78□□□□□ -0.04
MED28-203ENST00000503945 CNKSR2Q8WXI2 1034 aa14.78□□□□□ -0.04
MED28-203ENST00000503945 XAGE2Q96GT9 111 aa14.78□□□□□ -0.04
MED28-203ENST00000503945 MS4A4AQ96JQ5 239 aa14.78□□□□□ -0.04
MED28-203ENST00000503945 EFCC1Q9HA90 598 aa14.78□□□□□ -0.04
MED28-203ENST00000503945 USP40Q9NVE5 1235 aa14.78□□□□□ -0.04
MED28-203ENST00000503945 TNNQ9UQP3 1299 aa14.78□□□□□ -0.04
MED28-203ENST00000503945 CSADQ9Y600 493 aa14.78□□□□□ -0.04
MED28-203ENST00000503945 A0A1B0GUL7 405 aa14.77□□□□□ -0.05
MED28-203ENST00000503945 ADORA1P30542 326 aa14.77□□□□□ -0.05
MED28-203ENST00000503945 MVPQ14764 893 aaKnown RBP14.77□□□□□ -0.05
MED28-203ENST00000503945 SALL1Q9NSC2 1324 aa14.76□□□□□ -0.05
MED28-203ENST00000503945 ZBTB22O15209 634 aa14.76□□□□□ -0.05
MED28-203ENST00000503945 EN2P19622 333 aaPredicted RBP14.76□□□□□ -0.05
MED28-203ENST00000503945 ATP8B2P98198 1209 aa14.76□□□□□ -0.05
MED28-203ENST00000503945 DIXDC1Q155Q3 683 aa14.76□□□□□ -0.05
MED28-203ENST00000503945 DCAF15Q66K64 600 aa14.76□□□□□ -0.05
MED28-203ENST00000503945 CDC42EP5Q6NZY7 148 aa14.76□□□□□ -0.05
MED28-203ENST00000503945 FAM151AQ8WW52 585 aa14.76□□□□□ -0.05
MED28-203ENST00000503945 ABCF2Q9UG63 623 aa14.76□□□□□ -0.05
MED28-203ENST00000503945 PNMA6EA0A0J9YXQ4 647 aa14.75□□□□□ -0.05
MED28-203ENST00000503945 PRDX5P30044 214 aa14.75□□□□□ -0.05
MED28-203ENST00000503945 GTF2A2P52657 109 aa14.75□□□□□ -0.05
MED28-203ENST00000503945 TCP10Q12799 353 aa14.75□□□□□ -0.05
MED28-203ENST00000503945 MIGA2Q7L4E1 593 aa14.75□□□□□ -0.05
MED28-203ENST00000503945 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.75□□□□□ -0.05
MED28-203ENST00000503945 BRI3BPQ8WY22 251 aa14.75□□□□□ -0.05
MED28-203ENST00000503945 ARMC5Q96C12 935 aa14.75□□□□□ -0.05
MED28-203ENST00000503945 DAGLAQ9Y4D2 1042 aa14.75□□□□□ -0.05
MED28-203ENST00000503945 HTTP42858 3142 aa14.74□□□□□ -0.05
MED28-203ENST00000503945 ZBTB7BO15156 539 aaPredicted RBP14.74□□□□□ -0.05
MED28-203ENST00000503945 OS9Q13438 667 aaPredicted RBP14.74□□□□□ -0.05
MED28-203ENST00000503945 VGLL4Q14135 290 aa14.74□□□□□ -0.05
MED28-203ENST00000503945 ERICH6Q7L0X2 663 aa14.74□□□□□ -0.05
MED28-203ENST00000503945 DZIP1Q86YF9 867 aaKnown RBP14.74□□□□□ -0.05
MED28-203ENST00000503945 ITPRIPQ8IWB1 547 aa14.74□□□□□ -0.05
MED28-203ENST00000503945 RBBP6Q7Z6E9 1792 aaKnown RBP14.74□□□□□ -0.05
MED28-203ENST00000503945 ARAP2Q8WZ64 1704 aa14.74□□□□□ -0.05
MED28-203ENST00000503945 CCL15-CCL14A0A0B4J2E2 113 aa14.73□□□□□ -0.05
MED28-203ENST00000503945 SURF6O75683 361 aaKnown RBP14.73□□□□□ -0.05
MED28-203ENST00000503945 WDHD1O75717 1129 aaPredicted RBP14.73□□□□□ -0.05
MED28-203ENST00000503945 RASGRF1Q13972 1273 aa14.73□□□□□ -0.05
MED28-203ENST00000503945 TAF1CQ15572 869 aaPredicted RBP14.73□□□□□ -0.05
MED28-203ENST00000503945 CCL15Q16663 113 aa14.73□□□□□ -0.05
MED28-203ENST00000503945 ERO1BQ86YB8 467 aa14.73□□□□□ -0.05
MED28-203ENST00000503945 FAM43AQ8N2R8 423 aa14.73□□□□□ -0.05
MED28-203ENST00000503945 ZKSCAN4Q969J2 545 aaPredicted RBP14.73□□□□□ -0.05
MED28-203ENST00000503945 OTUD5Q96G74 571 aa14.73□□□□□ -0.05
MED28-203ENST00000503945 FAM163AQ96GL9 167 aaPredicted RBP14.73□□□□□ -0.05
MED28-203ENST00000503945 WRNIP1Q96S55 665 aa14.73□□□□□ -0.05
MED28-203ENST00000503945 ZNF341Q9BYN7 854 aa14.73□□□□□ -0.05
MED28-203ENST00000503945 ZFYVE28Q9HCC9 887 aa14.73□□□□□ -0.05
MED28-203ENST00000503945 CENPFP49454 3210 aa14.73□□□□□ -0.05
MED28-203ENST00000503945 PDS5AQ29RF7 1337 aaKnown RBP14.72□□□□□ -0.05
MED28-203ENST00000503945 ZBED9Q6R2W3 1325 aa14.72□□□□□ -0.05
MED28-203ENST00000503945 LDHCP07864 332 aa14.72□□□□□ -0.05
MED28-203ENST00000503945 UQCRFS1P1P0C7P4 283 aa14.72□□□□□ -0.05
MED28-203ENST00000503945 MS4A1P11836 297 aa14.72□□□□□ -0.05
MED28-203ENST00000503945 POLA2Q14181 598 aa14.72□□□□□ -0.05
MED28-203ENST00000503945 SPATA5Q8NB90 893 aa14.72□□□□□ -0.05
MED28-203ENST00000503945 SSH3Q8TE77 659 aa14.72□□□□□ -0.05
MED28-203ENST00000503945 GCC1Q96CN9 775 aa14.72□□□□□ -0.05
MED28-203ENST00000503945 MKI67P46013 3256 aaKnown RBP14.71□□□□□ -0.05
MED28-203ENST00000503945 GSTO1P78417 241 aa14.71□□□□□ -0.05
MED28-203ENST00000503945 NFIAQ12857 509 aa14.71□□□□□ -0.05
MED28-203ENST00000503945 HABP4Q5JVS0 413 aaKnown RBP14.71□□□□□ -0.05
MED28-203ENST00000503945 CCDC158Q5M9N0 1113 aa14.71□□□□□ -0.05
MED28-203ENST00000503945 HMG20BQ9P0W2 317 aa14.71□□□□□ -0.05
MED28-203ENST00000503945 PTCH2Q9Y6C5 1203 aa14.71□□□□□ -0.05
MED28-203ENST00000503945 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.71□□□□□ -0.05
MED28-203ENST00000503945 SPDYE5A6NIY4 337 aa14.7□□□□□ -0.06
MED28-203ENST00000503945 ENTPD3O75355 529 aa14.7□□□□□ -0.06
MED28-203ENST00000503945 CETPP11597 493 aa14.7□□□□□ -0.06
MED28-203ENST00000503945 MECOMQ03112 1051 aa14.7□□□□□ -0.06
MED28-203ENST00000503945 SNAPC2Q13487 334 aa14.7□□□□□ -0.06
MED28-203ENST00000503945 ARHGEF6Q15052 776 aa14.7□□□□□ -0.06
MED28-203ENST00000503945 ZSCAN29Q8IWY8 852 aaPredicted RBP14.7□□□□□ -0.06
MED28-203ENST00000503945 ZNF333Q96JL9 665 aa14.7□□□□□ -0.06
MED28-203ENST00000503945 TMEM106CQ9BVX2 250 aa14.7□□□□□ -0.06
MED28-203ENST00000503945 IDI2Q9BXS1 227 aa14.7□□□□□ -0.06
MED28-203ENST00000503945 GPR108Q9NPR9 543 aa14.7□□□□□ -0.06
MED28-203ENST00000503945 RAI14Q9P0K7 980 aa14.7□□□□□ -0.06
MED28-203ENST00000503945 LRP2BPQ9P2M1 347 aa14.7□□□□□ -0.06
MED28-203ENST00000503945 FAM198AQ9UFP1 575 aa14.7□□□□□ -0.06
MED28-203ENST00000503945 SNCAIPQ9Y6H5 919 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms