RNA–Protein interactions for RNA: ENST00000503139.5

EXOSC9-203, Transcript of exosome component 9, humanhuman

TSL 1 (best)

Gene EXOSC9, Length 1,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-203ENST00000503139 PTPN11Q06124 597 aaPredicted RBP12.61□□□□□ -0.39
EXOSC9-203ENST00000503139 GALNT11Q8NCW6 608 aa12.61□□□□□ -0.39
EXOSC9-203ENST00000503139 EFR3BQ9Y2G0 817 aa12.61□□□□□ -0.39
EXOSC9-203ENST00000503139 CYP11A1P05108 521 aa12.6□□□□□ -0.39
EXOSC9-203ENST00000503139 NASPP49321 788 aaPredicted RBP12.6□□□□□ -0.39
EXOSC9-203ENST00000503139 COL9A2Q14055 689 aaPredicted RBP12.6□□□□□ -0.39
EXOSC9-203ENST00000503139 ZNF385CQ66K41 422 aaPredicted RBP12.6□□□□□ -0.39
EXOSC9-203ENST00000503139 MAP1SQ66K74 1059 aaPredicted RBP12.6□□□□□ -0.39
EXOSC9-203ENST00000503139 DMRTC2Q8IXT2 367 aaPredicted RBP12.6□□□□□ -0.39
EXOSC9-203ENST00000503139 KLHL23Q8NBE8 558 aa12.6□□□□□ -0.39
EXOSC9-203ENST00000503139 JARID2Q92833 1246 aaPredicted RBP12.6□□□□□ -0.39
EXOSC9-203ENST00000503139 ZNF775Q96BV0 537 aaPredicted RBP12.6□□□□□ -0.39
EXOSC9-203ENST00000503139 MPP2Q14168 576 aa12.59□□□□□ -0.39
EXOSC9-203ENST00000503139 POU4F3Q15319 338 aa12.59□□□□□ -0.39
EXOSC9-203ENST00000503139 LCE2AQ5TA79 106 aaPredicted RBP12.59□□□□□ -0.39
EXOSC9-203ENST00000503139 MAP4K3Q8IVH8 894 aa12.59□□□□□ -0.39
EXOSC9-203ENST00000503139 NKD1Q969G9 470 aa12.59□□□□□ -0.39
EXOSC9-203ENST00000503139 DEAF1O75398 565 aaPredicted RBP12.58□□□□□ -0.4
EXOSC9-203ENST00000503139 CTSBP07858 339 aa12.58□□□□□ -0.4
EXOSC9-203ENST00000503139 GTF2F1P35269 517 aaKnown RBP eCLIP12.58□□□□□ -0.4
EXOSC9-203ENST00000503139 CORO1BQ9BR76 489 aa12.58□□□□□ -0.4
EXOSC9-203ENST00000503139 KRT82Q9NSB4 513 aa12.58□□□□□ -0.4
EXOSC9-203ENST00000503139 TLR3O15455 904 aaKnown RBP12.57□□□□□ -0.4
EXOSC9-203ENST00000503139 SELPP16109 830 aa12.57□□□□□ -0.4
EXOSC9-203ENST00000503139 MAOBP27338 520 aa12.57□□□□□ -0.4
EXOSC9-203ENST00000503139 SUZ12Q15022 739 aaKnown RBP12.57□□□□□ -0.4
EXOSC9-203ENST00000503139 SEZ6Q53EL9 994 aa12.57□□□□□ -0.4
EXOSC9-203ENST00000503139 TREML4Q6UXN2 200 aa12.57□□□□□ -0.4
EXOSC9-203ENST00000503139 KCNB2Q92953 911 aa12.57□□□□□ -0.4
EXOSC9-203ENST00000503139 ADAM11O75078 769 aa12.56□□□□□ -0.4
EXOSC9-203ENST00000503139 REC114Q7Z4M0 266 aa12.56□□□□□ -0.4
EXOSC9-203ENST00000503139 DTWD1Q8N5C7 304 aa12.56□□□□□ -0.4
EXOSC9-203ENST00000503139 GPBAR1Q8TDU6 330 aa12.56□□□□□ -0.4
EXOSC9-203ENST00000503139 DNAJC2Q99543 621 aaKnown RBP12.56□□□□□ -0.4
EXOSC9-203ENST00000503139 ZC3H12CQ9C0D7 883 aaKnown RBP12.56□□□□□ -0.4
EXOSC9-203ENST00000503139 CCDC86Q9H6F5 360 aaKnown RBP12.56□□□□□ -0.4
EXOSC9-203ENST00000503139 RBL2Q08999 1139 aa12.55□□□□□ -0.4
EXOSC9-203ENST00000503139 CWF19L2Q2TBE0 894 aaKnown RBP12.55□□□□□ -0.4
EXOSC9-203ENST00000503139 FOXD4L6Q3SYB3 417 aaPredicted RBP12.55□□□□□ -0.4
EXOSC9-203ENST00000503139 FOXD4L3Q6VB84 417 aaPredicted RBP12.55□□□□□ -0.4
EXOSC9-203ENST00000503139 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.55□□□□□ -0.4
EXOSC9-203ENST00000503139 LOC100289279A0A1B0GTE1 492 aa12.54□□□□□ -0.4
EXOSC9-203ENST00000503139 NLRP12P59046 1061 aa12.54□□□□□ -0.4
EXOSC9-203ENST00000503139 RPL6Q02878 288 aaKnown RBP12.54□□□□□ -0.4
EXOSC9-203ENST00000503139 KCNK4Q9NYG8 393 aa12.54□□□□□ -0.4
EXOSC9-203ENST00000503139 STRIP2Q9ULQ0 834 aa12.54□□□□□ -0.4
EXOSC9-203ENST00000503139 DDX3YO15523 660 aaKnown RBP12.53□□□□□ -0.4
EXOSC9-203ENST00000503139 ZNF862O60290 1169 aa12.53□□□□□ -0.4
EXOSC9-203ENST00000503139 CD68P34810 354 aaPredicted RBP12.53□□□□□ -0.4
EXOSC9-203ENST00000503139 TRIM11Q96F44 468 aa12.53□□□□□ -0.4
EXOSC9-203ENST00000503139 ARHGEF15O94989 841 aa12.52□□□□□ -0.41
EXOSC9-203ENST00000503139 LINC00114Q6XXX2 140 aa12.52□□□□□ -0.41
EXOSC9-203ENST00000503139 SVOPQ8N4V2 548 aa12.52□□□□□ -0.41
EXOSC9-203ENST00000503139 USP26Q9BXU7 913 aa12.52□□□□□ -0.41
EXOSC9-203ENST00000503139 RRAGCQ9HB90 399 aa12.52□□□□□ -0.41
EXOSC9-203ENST00000503139 BRMS1Q9HCU9 246 aa12.52□□□□□ -0.41
EXOSC9-203ENST00000503139 BPNT1O95861 308 aa12.51□□□□□ -0.41
EXOSC9-203ENST00000503139 DLGAP3O95886 979 aa12.51□□□□□ -0.41
EXOSC9-203ENST00000503139 SSBP05455 408 aaKnown RBP eCLIP12.51□□□□□ -0.41
EXOSC9-203ENST00000503139 CDK8P49336 464 aa12.51□□□□□ -0.41
EXOSC9-203ENST00000503139 TRAPPC3LQ5T215 181 aa12.51□□□□□ -0.41
EXOSC9-203ENST00000503139 NEDD1Q8NHV4 660 aa12.51□□□□□ -0.41
EXOSC9-203ENST00000503139 ENAMQ9NRM1 1142 aa12.51□□□□□ -0.41
EXOSC9-203ENST00000503139 STK10O94804 968 aaKnown RBP12.5□□□□□ -0.41
EXOSC9-203ENST00000503139 SNRPNP63162 240 aaKnown RBP12.5□□□□□ -0.41
EXOSC9-203ENST00000503139 KIF4BQ2VIQ3 1234 aa12.5□□□□□ -0.41
EXOSC9-203ENST00000503139 FBXO11Q86XK2 927 aa12.5□□□□□ -0.41
EXOSC9-203ENST00000503139 FMR1NBQ8N0W7 255 aaPredicted RBP12.5□□□□□ -0.41
EXOSC9-203ENST00000503139 REXO1Q8N1G1 1221 aaKnown RBP12.5□□□□□ -0.41
EXOSC9-203ENST00000503139 WDR89Q96FK6 387 aaPredicted RBP12.5□□□□□ -0.41
EXOSC9-203ENST00000503139 ACSBG1Q96GR2 724 aa12.5□□□□□ -0.41
EXOSC9-203ENST00000503139 ZNF408Q9H9D4 720 aa12.5□□□□□ -0.41
EXOSC9-203ENST00000503139 PPT2Q9UMR5 302 aa12.5□□□□□ -0.41
EXOSC9-203ENST00000503139 PCDHA4Q9UN74 947 aa12.5□□□□□ -0.41
EXOSC9-203ENST00000503139 POLR3KQ9Y2Y1 108 aaPredicted RBP12.5□□□□□ -0.41
EXOSC9-203ENST00000503139 A0A0A0MRY4 1105 aa12.49□□□□□ -0.41
EXOSC9-203ENST00000503139 GFRA2O00451 464 aa12.49□□□□□ -0.41
EXOSC9-203ENST00000503139 DLL1O00548 723 aa12.49□□□□□ -0.41
EXOSC9-203ENST00000503139 PDE3AQ14432 1141 aa12.49□□□□□ -0.41
EXOSC9-203ENST00000503139 DIEXFQ68CQ4 756 aaKnown RBP12.49□□□□□ -0.41
EXOSC9-203ENST00000503139 DCAF11Q8TEB1 546 aa12.49□□□□□ -0.41
EXOSC9-203ENST00000503139 HIRIP3Q9BW71 556 aaPredicted RBP12.49□□□□□ -0.41
EXOSC9-203ENST00000503139 LIG1P18858 919 aa12.48□□□□□ -0.41
EXOSC9-203ENST00000503139 ZNF165P49910 485 aa12.48□□□□□ -0.41
EXOSC9-203ENST00000503139 SHDQ96IW2 340 aa12.48□□□□□ -0.41
EXOSC9-203ENST00000503139 SRRTQ9BXP5 876 aaKnown RBP12.48□□□□□ -0.41
EXOSC9-203ENST00000503139 LNPKQ9C0E8 428 aa12.48□□□□□ -0.41
EXOSC9-203ENST00000503139 PCDHGC5Q9Y5F6 944 aa12.48□□□□□ -0.41
EXOSC9-203ENST00000503139 MCM4P33991 863 aa12.47□□□□□ -0.41
EXOSC9-203ENST00000503139 CLCQ05315 142 aa12.47□□□□□ -0.41
EXOSC9-203ENST00000503139 INPP5AQ14642 412 aa12.47□□□□□ -0.41
EXOSC9-203ENST00000503139 LRFN4Q6PJG9 635 aa12.47□□□□□ -0.41
EXOSC9-203ENST00000503139 CCDC81Q6ZN84 652 aa12.47□□□□□ -0.41
EXOSC9-203ENST00000503139 DPH6Q7L8W6 267 aa12.47□□□□□ -0.41
EXOSC9-203ENST00000503139 UBASH3BQ8TF42 649 aa12.47□□□□□ -0.41
EXOSC9-203ENST00000503139 PLPPR2Q96GM1 343 aa12.47□□□□□ -0.41
EXOSC9-203ENST00000503139 EHMT1Q9H9B1 1298 aa12.47□□□□□ -0.41
EXOSC9-203ENST00000503139 ETFBP38117 255 aa12.46□□□□□ -0.41
EXOSC9-203ENST00000503139 RAC1P63000 192 aa12.46□□□□□ -0.41
EXOSC9-203ENST00000503139 WIPI1Q5MNZ9 446 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms