RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 SBF2Q86WG5 1849 aa13.56□□□□□ -0.24
USP46-204ENST00000503060 TAF1P21675 1872 aa13.56□□□□□ -0.24
USP46-204ENST00000503060 TRDNQ13061 729 aa13.55□□□□□ -0.24
USP46-204ENST00000503060 HSP90AA2PQ14568 343 aaPredicted RBP13.55□□□□□ -0.24
USP46-204ENST00000503060 CCDC183Q5T5S1 534 aa13.55□□□□□ -0.24
USP46-204ENST00000503060 TTC6Q86TZ1 520 aa13.55□□□□□ -0.24
USP46-204ENST00000503060 ARMT1Q9H993 441 aa13.55□□□□□ -0.24
USP46-204ENST00000503060 GNL3LQ9NVN8 582 aaKnown RBP13.55□□□□□ -0.24
USP46-204ENST00000503060 GYG1P46976 350 aa13.55□□□□□ -0.24
USP46-204ENST00000503060 NAA16Q6N069 864 aaPredicted RBP13.55□□□□□ -0.24
USP46-204ENST00000503060 TPTE2Q6XPS3 522 aa13.55□□□□□ -0.24
USP46-204ENST00000503060 SEPT12Q8IYM1 358 aa13.55□□□□□ -0.24
USP46-204ENST00000503060 EPB41L4AQ9HCS5 686 aaPredicted RBP13.55□□□□□ -0.24
USP46-204ENST00000503060 TRPC5Q9UL62 973 aaPredicted RBP13.55□□□□□ -0.24
USP46-204ENST00000503060 ELP1O95163 1332 aa13.55□□□□□ -0.24
USP46-204ENST00000503060 KLF18A0A0U1RQI7 1052 aa13.54□□□□□ -0.24
USP46-204ENST00000503060 IFNL3Q8IZI9 196 aa13.54□□□□□ -0.24
USP46-204ENST00000503060 CEP120Q8N960 986 aa13.54□□□□□ -0.24
USP46-204ENST00000503060 ZSCAN16Q9H4T2 348 aaPredicted RBP13.54□□□□□ -0.24
USP46-204ENST00000503060 LRP2BPQ9P2M1 347 aa13.54□□□□□ -0.24
USP46-204ENST00000503060 IQSEC3Q9UPP2 1182 aaPredicted RBP13.54□□□□□ -0.24
USP46-204ENST00000503060 C4BP0C0L5 1744 aa13.54□□□□□ -0.24
USP46-204ENST00000503060 PNPLA7Q6ZV29 1317 aa13.54□□□□□ -0.24
USP46-204ENST00000503060 WTIPA6NIX2 430 aaPredicted RBP13.54□□□□□ -0.24
USP46-204ENST00000503060 MARCH6O60337 910 aa13.54□□□□□ -0.24
USP46-204ENST00000503060 RPS8P62241 208 aaKnown RBP13.54□□□□□ -0.24
USP46-204ENST00000503060 NME8Q8N427 588 aa13.54□□□□□ -0.24
USP46-204ENST00000503060 SCAND2PQ9GZW5 306 aaPredicted RBP13.54□□□□□ -0.24
USP46-204ENST00000503060 NAPBQ9H115 298 aa13.54□□□□□ -0.24
USP46-204ENST00000503060 TSPY26PQ9H489 355 aa13.54□□□□□ -0.24
USP46-204ENST00000503060 GOLGA8BA8MQT2 603 aa13.53□□□□□ -0.24
USP46-204ENST00000503060 GSG1L2A8MUP6 293 aa13.53□□□□□ -0.24
USP46-204ENST00000503060 TPD52L2O43399 206 aaKnown RBP13.53□□□□□ -0.24
USP46-204ENST00000503060 GNAT2P19087 354 aa13.53□□□□□ -0.24
USP46-204ENST00000503060 CAVIN4Q5BKX8 364 aa13.53□□□□□ -0.24
USP46-204ENST00000503060 CYB5R4Q7L1T6 521 aa13.53□□□□□ -0.24
USP46-204ENST00000503060 LCORLQ8N3X6 602 aa13.53□□□□□ -0.24
USP46-204ENST00000503060 DENND2AQ9ULE3 1009 aa13.53□□□□□ -0.24
USP46-204ENST00000503060 HPS5Q9UPZ3 1129 aa13.53□□□□□ -0.24
USP46-204ENST00000503060 COL1A1P02452 1464 aaPredicted RBP13.53□□□□□ -0.24
USP46-204ENST00000503060 LETM1O95202 739 aaPredicted RBP13.53□□□□□ -0.24
USP46-204ENST00000503060 MYCNP04198 464 aaPredicted RBP13.53□□□□□ -0.24
USP46-204ENST00000503060 RFC4P35249 363 aa13.53□□□□□ -0.24
USP46-204ENST00000503060 CCDC173Q0VFZ6 552 aa13.53□□□□□ -0.24
USP46-204ENST00000503060 TRAPPC3LQ5T215 181 aa13.53□□□□□ -0.24
USP46-204ENST00000503060 CCDC24Q8N4L8 307 aa13.53□□□□□ -0.24
USP46-204ENST00000503060 TFIP11Q9UBB9 837 aaKnown RBP13.53□□□□□ -0.24
USP46-204ENST00000503060 C4AP0C0L4 1744 aa13.53□□□□□ -0.24
USP46-204ENST00000503060 FAM196AQ6ZSG2 479 aa13.52□□□□□ -0.24
USP46-204ENST00000503060 NKX2-3Q8TAU0 364 aa13.52□□□□□ -0.24
USP46-204ENST00000503060 LEO1Q8WVC0 666 aaPredicted RBP13.52□□□□□ -0.24
USP46-204ENST00000503060 FAM84BQ96KN1 310 aaPredicted RBP13.52□□□□□ -0.24
USP46-204ENST00000503060 SPATA32Q96LK8 384 aa13.52□□□□□ -0.24
USP46-204ENST00000503060 PPP1R9BQ96SB3 815 aa13.52□□□□□ -0.24
USP46-204ENST00000503060 CARMIL3Q8ND23 1372 aa13.52□□□□□ -0.25
USP46-204ENST00000503060 NEDD4P46934 1319 aa13.52□□□□□ -0.25
USP46-204ENST00000503060 B4E1Z4 1266 aa13.52□□□□□ -0.25
USP46-204ENST00000503060 SH2B2O14492 632 aaPredicted RBP13.52□□□□□ -0.25
USP46-204ENST00000503060 PRKAB2O43741 272 aa13.52□□□□□ -0.25
USP46-204ENST00000503060 DHX16O60231 1041 aaKnown RBP13.52□□□□□ -0.25
USP46-204ENST00000503060 FDPSP14324 419 aaKnown RBP13.52□□□□□ -0.25
USP46-204ENST00000503060 CYP7A1P22680 504 aa13.52□□□□□ -0.25
USP46-204ENST00000503060 PSEN1P49768 467 aa13.52□□□□□ -0.25
USP46-204ENST00000503060 FOSBP53539 338 aa13.52□□□□□ -0.25
USP46-204ENST00000503060 VPS37DQ86XT2 251 aa13.52□□□□□ -0.25
USP46-204ENST00000503060 FAM43AQ8N2R8 423 aa13.52□□□□□ -0.25
USP46-204ENST00000503060 ANKRD2Q9GZV1 360 aa13.52□□□□□ -0.25
USP46-204ENST00000503060 ANGEL1Q9UNK9 670 aaKnown RBP13.52□□□□□ -0.25
USP46-204ENST00000503060 SLC4A4Q9Y6R1 1079 aa13.52□□□□□ -0.25
USP46-204ENST00000503060 PPP4R3CPQ6ZMV5 832 aa13.51□□□□□ -0.25
USP46-204ENST00000503060 FBXO33Q7Z6M2 555 aa13.51□□□□□ -0.25
USP46-204ENST00000503060 MIGA1Q8NAN2 632 aa13.51□□□□□ -0.25
USP46-204ENST00000503060 NACAP1Q9BZK3 213 aa13.51□□□□□ -0.25
USP46-204ENST00000503060 ABCF2Q9UG63 623 aa13.51□□□□□ -0.25
USP46-204ENST00000503060 TIAM2Q8IVF5 1701 aa13.51□□□□□ -0.25
USP46-204ENST00000503060 PPFIA3O75145 1194 aa13.51□□□□□ -0.25
USP46-204ENST00000503060 TM4SF1P30408 202 aa13.51□□□□□ -0.25
USP46-204ENST00000503060 TRIM44Q96DX7 344 aaPredicted RBP13.51□□□□□ -0.25
USP46-204ENST00000503060 TMEM87BQ96K49 555 aa13.51□□□□□ -0.25
USP46-204ENST00000503060 LRRC4BQ9NT99 713 aa13.51□□□□□ -0.25
USP46-204ENST00000503060 RAI14Q9P0K7 980 aa13.51□□□□□ -0.25
USP46-204ENST00000503060 TDO2P48775 406 aa13.5□□□□□ -0.25
USP46-204ENST00000503060 CTDSPL2Q05D32 466 aa13.5□□□□□ -0.25
USP46-204ENST00000503060 RAB11FIP4Q86YS3 637 aa13.5□□□□□ -0.25
USP46-204ENST00000503060 PPME1Q9Y570 386 aa13.5□□□□□ -0.25
USP46-204ENST00000503060 SEMA3EO15041 775 aa13.5□□□□□ -0.25
USP46-204ENST00000503060 NFIXQ14938 502 aa13.5□□□□□ -0.25
USP46-204ENST00000503060 AKNAD1Q5T1N1 836 aa13.5□□□□□ -0.25
USP46-204ENST00000503060 APBB1IPQ7Z5R6 666 aaPredicted RBP13.5□□□□□ -0.25
USP46-204ENST00000503060 ADGRA1Q86SQ6 560 aa13.5□□□□□ -0.25
USP46-204ENST00000503060 INCENPQ9NQS7 918 aa13.5□□□□□ -0.25
USP46-204ENST00000503060 TACC3Q9Y6A5 838 aa13.5□□□□□ -0.25
USP46-204ENST00000503060 TNRC6CQ9HCJ0 1690 aaKnown RBP13.5□□□□□ -0.25
USP46-204ENST00000503060 CPLX1O14810 134 aa13.49□□□□□ -0.25
USP46-204ENST00000503060 NPHP1O15259 732 aa13.49□□□□□ -0.25
USP46-204ENST00000503060 KLRK1P26718 216 aa13.49□□□□□ -0.25
USP46-204ENST00000503060 IGDCC4Q8TDY8 1250 aa13.49□□□□□ -0.25
USP46-204ENST00000503060 CNNM2Q9H8M5 875 aa13.49□□□□□ -0.25
USP46-204ENST00000503060 CFAP45Q9UL16 551 aa13.49□□□□□ -0.25
USP46-204ENST00000503060 MAGEB6P1A0A0J9YX57 407 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms