RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 LIMCH1Q9UPQ0 1083 aa8.69□□□□□ -1.02
CPNE4-202ENST00000502818 SLC4A4Q9Y6R1 1079 aa8.69□□□□□ -1.02
CPNE4-202ENST00000502818 NEDD4P46934 1319 aa8.68□□□□□ -1.02
CPNE4-202ENST00000502818 MAGEB6P1A0A0J9YX57 407 aa8.68□□□□□ -1.02
CPNE4-202ENST00000502818 PATL2C9JE40 543 aaKnown RBP8.68□□□□□ -1.02
CPNE4-202ENST00000502818 H0YIN7 160 aa8.68□□□□□ -1.02
CPNE4-202ENST00000502818 SEMA3EO15041 775 aa8.68□□□□□ -1.02
CPNE4-202ENST00000502818 PPFIA3O75145 1194 aa8.68□□□□□ -1.02
CPNE4-202ENST00000502818 IL1R1P14778 569 aa8.68□□□□□ -1.02
CPNE4-202ENST00000502818 KCNA3P22001 575 aa8.68□□□□□ -1.02
CPNE4-202ENST00000502818 HMGB2P26583 209 aaKnown RBP8.68□□□□□ -1.02
CPNE4-202ENST00000502818 PSMA5P28066 241 aa8.68□□□□□ -1.02
CPNE4-202ENST00000502818 R3HDM1Q15032 1099 aaKnown RBP8.68□□□□□ -1.02
CPNE4-202ENST00000502818 SLC4A8Q2Y0W8 1093 aa8.68□□□□□ -1.02
CPNE4-202ENST00000502818 CYB5R4Q7L1T6 521 aa8.68□□□□□ -1.02
CPNE4-202ENST00000502818 ZNF804AQ7Z570 1209 aa8.68□□□□□ -1.02
CPNE4-202ENST00000502818 RAB11FIP4Q86YS3 637 aa8.68□□□□□ -1.02
CPNE4-202ENST00000502818 TNPO1Q92973 898 aaKnown RBP8.68□□□□□ -1.02
CPNE4-202ENST00000502818 SENP2Q9HC62 589 aa8.68□□□□□ -1.02
CPNE4-202ENST00000502818 CHD4Q14839 1912 aa8.68□□□□□ -1.02
CPNE4-202ENST00000502818 LRRC37AA6NMS7 1700 aa8.68□□□□□ -1.02
CPNE4-202ENST00000502818 PSDA5PKW4 1024 aaPredicted RBP8.68□□□□□ -1.02
CPNE4-202ENST00000502818 DPEP1P16444 411 aa8.68□□□□□ -1.02
CPNE4-202ENST00000502818 ALDH1B1P30837 517 aa8.68□□□□□ -1.02
CPNE4-202ENST00000502818 GTF2IP78347 998 aa8.68□□□□□ -1.02
CPNE4-202ENST00000502818 APOBRQ0VD83 1088 aa8.68□□□□□ -1.02
CPNE4-202ENST00000502818 DPP8Q6V1X1 898 aaPredicted RBP8.68□□□□□ -1.02
CPNE4-202ENST00000502818 CERS5Q8N5B7 392 aa8.68□□□□□ -1.02
CPNE4-202ENST00000502818 BRF1Q92994 677 aa8.68□□□□□ -1.02
CPNE4-202ENST00000502818 MYH13Q9UKX3 1938 aa8.67□□□□□ -1.02
CPNE4-202ENST00000502818 ZNF213O14771 459 aa8.67□□□□□ -1.02
CPNE4-202ENST00000502818 C21orf2O43822 256 aa8.67□□□□□ -1.02
CPNE4-202ENST00000502818 CYP2D6P10635 497 aa8.67□□□□□ -1.02
CPNE4-202ENST00000502818 MCM2P49736 904 aa8.67□□□□□ -1.02
CPNE4-202ENST00000502818 RAB3GAP1Q15042 981 aa8.67□□□□□ -1.02
CPNE4-202ENST00000502818 IMMTQ16891 758 aaKnown RBP8.67□□□□□ -1.02
CPNE4-202ENST00000502818 STYK1Q6J9G0 422 aa8.67□□□□□ -1.02
CPNE4-202ENST00000502818 DHX32Q7L7V1 743 aaKnown RBP8.67□□□□□ -1.02
CPNE4-202ENST00000502818 MB21D2Q8IYB1 491 aaPredicted RBP8.67□□□□□ -1.02
CPNE4-202ENST00000502818 DBNDD1Q9H9R9 158 aa8.67□□□□□ -1.02
CPNE4-202ENST00000502818 LAMA4Q16363 1823 aa8.67□□□□□ -1.02
CPNE4-202ENST00000502818 UTRNP46939 3433 aa8.67□□□□□ -1.02
CPNE4-202ENST00000502818 PDS5AQ29RF7 1337 aaKnown RBP8.67□□□□□ -1.02
CPNE4-202ENST00000502818 C10orf71Q711Q0 1435 aa8.66□□□□□ -1.02
CPNE4-202ENST00000502818 LOC100996750A0A140TA64 210 aa8.66□□□□□ -1.02
CPNE4-202ENST00000502818 FBXW7Q969H0 707 aa8.66□□□□□ -1.02
CPNE4-202ENST00000502818 KRTAP4-6Q9BYQ5 205 aa8.66□□□□□ -1.02
CPNE4-202ENST00000502818 PCDHAC2Q9Y5I4 1007 aa8.66□□□□□ -1.02
CPNE4-202ENST00000502818 SRCAPQ6ZRS2 3230 aa8.66□□□□□ -1.02
CPNE4-202ENST00000502818 SNED1Q8TER0 1413 aa8.66□□□□□ -1.02
CPNE4-202ENST00000502818 B4E1Z4 1266 aa8.66□□□□□ -1.02
CPNE4-202ENST00000502818 F8W031 263 aaPredicted RBP8.66□□□□□ -1.02
CPNE4-202ENST00000502818 LDHBP07195 334 aaKnown RBP8.66□□□□□ -1.02
CPNE4-202ENST00000502818 KRT32Q14532 448 aa8.66□□□□□ -1.02
CPNE4-202ENST00000502818 ALX1Q15699 326 aa8.66□□□□□ -1.02
CPNE4-202ENST00000502818 MFSD14BQ5SR56 506 aa8.66□□□□□ -1.02
CPNE4-202ENST00000502818 SH3RF3Q8TEJ3 882 aaPredicted RBP8.66□□□□□ -1.02
CPNE4-202ENST00000502818 NAPBQ9H115 298 aa8.66□□□□□ -1.02
CPNE4-202ENST00000502818 CTNNA3Q9UI47 895 aa8.66□□□□□ -1.02
CPNE4-202ENST00000502818 QSER1Q2KHR3 1735 aa8.66□□□□□ -1.02
CPNE4-202ENST00000502818 SALL1Q9NSC2 1324 aa8.65□□□□□ -1.02
CPNE4-202ENST00000502818 MINDY4BA8MYZ0 360 aa8.65□□□□□ -1.02
CPNE4-202ENST00000502818 PRC1O43663 620 aa8.65□□□□□ -1.02
CPNE4-202ENST00000502818 JAK2O60674 1132 aa8.65□□□□□ -1.02
CPNE4-202ENST00000502818 TDO2P48775 406 aa8.65□□□□□ -1.02
CPNE4-202ENST00000502818 AOC3Q16853 763 aa8.65□□□□□ -1.02
CPNE4-202ENST00000502818 DZIP1Q86YF9 867 aaKnown RBP8.65□□□□□ -1.02
CPNE4-202ENST00000502818 WDR66Q8TBY9 1149 aa8.65□□□□□ -1.02
CPNE4-202ENST00000502818 ALDH8A1Q9H2A2 487 aaPredicted RBP8.65□□□□□ -1.02
CPNE4-202ENST00000502818 NCOA5Q9HCD5 579 aaKnown RBP8.65□□□□□ -1.02
CPNE4-202ENST00000502818 PRDM1O75626 825 aa8.65□□□□□ -1.03
CPNE4-202ENST00000502818 CTDNEP1O95476 244 aa8.65□□□□□ -1.03
CPNE4-202ENST00000502818 CCT2P78371 535 aaKnown RBP8.65□□□□□ -1.03
CPNE4-202ENST00000502818 SCRN1Q12765 414 aa8.65□□□□□ -1.03
CPNE4-202ENST00000502818 L1TD1Q5T7N2 865 aaKnown RBP8.65□□□□□ -1.03
CPNE4-202ENST00000502818 CTR9Q6PD62 1173 aa8.65□□□□□ -1.03
CPNE4-202ENST00000502818 TMC4Q7Z404 712 aa8.65□□□□□ -1.03
CPNE4-202ENST00000502818 ZKSCAN3Q9BRR0 538 aa8.65□□□□□ -1.03
CPNE4-202ENST00000502818 RTFDC1Q9BY42 306 aaPredicted RBP8.65□□□□□ -1.03
CPNE4-202ENST00000502818 ZC3H12CQ9C0D7 883 aaKnown RBP8.65□□□□□ -1.03
CPNE4-202ENST00000502818 USP17L12C9JPN9 530 aa8.64□□□□□ -1.03
CPNE4-202ENST00000502818 USP17L21D6R901 530 aa8.64□□□□□ -1.03
CPNE4-202ENST00000502818 USP17L8P0C7I0 530 aa8.64□□□□□ -1.03
CPNE4-202ENST00000502818 GJB2P29033 226 aa8.64□□□□□ -1.03
CPNE4-202ENST00000502818 SCNN1DP51172 638 aa8.64□□□□□ -1.03
CPNE4-202ENST00000502818 PPARAQ07869 468 aa8.64□□□□□ -1.03
CPNE4-202ENST00000502818 FOXD4L6Q3SYB3 417 aaPredicted RBP8.64□□□□□ -1.03
CPNE4-202ENST00000502818 RRP12Q5JTH9 1297 aaKnown RBP8.64□□□□□ -1.03
CPNE4-202ENST00000502818 FOXD4L3Q6VB84 417 aaPredicted RBP8.64□□□□□ -1.03
CPNE4-202ENST00000502818 INTS4Q96HW7 963 aaKnown RBP8.64□□□□□ -1.03
CPNE4-202ENST00000502818 AGXT2Q9BYV1 514 aa8.64□□□□□ -1.03
CPNE4-202ENST00000502818 COA1Q9GZY4 146 aa8.64□□□□□ -1.03
CPNE4-202ENST00000502818 DCP1AQ9NPI6 582 aaPredicted RBP8.64□□□□□ -1.03
CPNE4-202ENST00000502818 RRAGDQ9NQL2 400 aaPredicted RBP8.64□□□□□ -1.03
CPNE4-202ENST00000502818 CIZ1Q9ULV3 898 aaPredicted RBP8.64□□□□□ -1.03
CPNE4-202ENST00000502818 KDM4AO75164 1064 aa8.63□□□□□ -1.03
CPNE4-202ENST00000502818 RXRAP19793 462 aa8.63□□□□□ -1.03
CPNE4-202ENST00000502818 NCOA7Q8NI08 942 aa8.63□□□□□ -1.03
CPNE4-202ENST00000502818 CNKSR1Q969H4 720 aa8.63□□□□□ -1.03
CPNE4-202ENST00000502818 ZSWIM5Q9P217 1185 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms