RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 ZNF513Q8N8E2 541 aaPredicted RBP4.51□□□□□ -1.69
SUB1-202ENST00000502453 GOLM1Q8NBJ4 401 aa4.51□□□□□ -1.69
SUB1-202ENST00000502453 RIN3Q8TB24 985 aa4.51□□□□□ -1.69
SUB1-202ENST00000502453 ZBED2Q9BTP6 218 aa4.51□□□□□ -1.69
SUB1-202ENST00000502453 PCDHGB3Q9Y5G1 929 aa4.51□□□□□ -1.69
SUB1-202ENST00000502453 TMEM238LA0A1B0GVL6 79 aa4.51□□□□□ -1.69
SUB1-202ENST00000502453 GADD45BO75293 160 aaPredicted RBP4.51□□□□□ -1.69
SUB1-202ENST00000502453 PCSK2P16519 638 aa4.51□□□□□ -1.69
SUB1-202ENST00000502453 CRKP46108 304 aa4.51□□□□□ -1.69
SUB1-202ENST00000502453 EIF6P56537 245 aaKnown RBP4.51□□□□□ -1.69
SUB1-202ENST00000502453 TMPRSS15P98073 1019 aa4.51□□□□□ -1.69
SUB1-202ENST00000502453 PABPC4Q13310 644 aaKnown RBP eCLIP4.51□□□□□ -1.69
SUB1-202ENST00000502453 UVSSAQ2YD98 709 aa4.51□□□□□ -1.69
SUB1-202ENST00000502453 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.51□□□□□ -1.69
SUB1-202ENST00000502453 hCG_1642624A0A1W2PR95 340 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 TSPY2A6NKD2 308 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 POLR3DP05423 398 aaPredicted RBP4.5□□□□□ -1.69
SUB1-202ENST00000502453 TSPY3P0CV98 308 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 TSPY8P0CW00 308 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 PTPREP23469 700 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 TSPY1Q01534 308 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 ARHGAP29Q52LW3 1261 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 NBPF14Q5TI25 921 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 SLC7A3Q8WY07 619 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 NPHS2Q9NP85 383 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 TRHDEQ9UKU6 1024 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 A0A1W2PRQ8 180 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 MYCP01106 439 aaPredicted RBP4.5□□□□□ -1.69
SUB1-202ENST00000502453 APPP05067 770 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 TRIM27P14373 513 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 ATICP31939 592 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 PURAQ00577 322 aaKnown RBP4.5□□□□□ -1.69
SUB1-202ENST00000502453 DDX10Q13206 875 aaKnown RBP4.5□□□□□ -1.69
SUB1-202ENST00000502453 NEUROD1Q13562 356 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 PPP4R3BQ5MIZ7 849 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 SNAP47Q5SQN1 464 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 VARS2Q5ST30 1063 aaKnown RBP4.5□□□□□ -1.69
SUB1-202ENST00000502453 XRRA1Q6P2D8 792 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 PDXDC1Q6P996 788 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 BLOC1S3Q6QNY0 202 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 SNX32Q86XE0 403 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 CHMP4CQ96CF2 233 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 TNIP3Q96KP6 325 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 CWC25Q9NXE8 425 aaPredicted RBP4.5□□□□□ -1.69
SUB1-202ENST00000502453 SAP30BPQ9UHR5 308 aaKnown RBP4.5□□□□□ -1.69
SUB1-202ENST00000502453 FOXD3Q9UJU5 478 aaPredicted RBP4.5□□□□□ -1.69
SUB1-202ENST00000502453 GPSM3Q9Y4H4 160 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 CBFA2T2O43439 604 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 PDE1CQ14123 709 aaPredicted RBP4.5□□□□□ -1.69
SUB1-202ENST00000502453 SEPT2Q15019 361 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 FXNQ16595 210 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 PTPN21Q16825 1174 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 HSP90AB3PQ58FF7 597 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 ESCO1Q5FWF5 840 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 AKAP4Q5JQC9 854 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 PPP4R3AQ6IN85 833 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 CFAP161Q6P656 301 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 IFNL2Q8IZJ0 200 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 TRIM63Q969Q1 353 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 SARGQ9BW04 601 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 BCO2Q9BYV7 579 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 GGNBP2Q9H3C7 697 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 KLK14Q9P0G3 267 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 ZFATQ9P243 1243 aa4.5□□□□□ -1.69
SUB1-202ENST00000502453 ZPR1O75312 459 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 FAM153BP0C7A2 387 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 HOXB1P14653 301 aaPredicted RBP4.49□□□□□ -1.69
SUB1-202ENST00000502453 SAFBQ15424 915 aaKnown RBP eCLIP4.49□□□□□ -1.69
SUB1-202ENST00000502453 PRPF40BQ6NWY9 871 aaKnown RBP4.49□□□□□ -1.69
SUB1-202ENST00000502453 SRLQ86TD4 932 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 AFAP1L2Q8N4X5 818 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 CCT6BQ92526 530 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 RHOBTB2Q9BYZ6 727 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 TMEM229AB2RXF0 380 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 CPEP16870 476 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 L1CAMP32004 1257 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 SCTRP47872 440 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 HDGFP51858 240 aaKnown RBP4.49□□□□□ -1.69
SUB1-202ENST00000502453 C6orf15Q6UXA7 325 aaPredicted RBP4.49□□□□□ -1.69
SUB1-202ENST00000502453 EEPD1Q7L9B9 569 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 RASSF3Q86WH2 238 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 NBPF5PQ86XG9 351 aaPredicted RBP4.49□□□□□ -1.69
SUB1-202ENST00000502453 NKD1Q969G9 470 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 TMEM74Q96NL1 305 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 TRIM8Q9BZR9 551 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.49□□□□□ -1.69
SUB1-202ENST00000502453 SYNRGQ9UMZ2 1314 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 PMM2O15305 246 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 DGKZQ13574 1117 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 GRM3Q14832 879 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 PLA2G4EQ3MJ16 856 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 HYIQ5T013 277 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 MSL1Q68DK7 614 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 ZSWIM2Q8NEG5 633 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 TRMT2BQ96GJ1 504 aaKnown RBP4.49□□□□□ -1.69
SUB1-202ENST00000502453 CDK5RAP3Q96JB5 506 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 YTHDC1Q96MU7 727 aaKnown RBP4.49□□□□□ -1.69
SUB1-202ENST00000502453 RIC8AQ9NPQ8 531 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 LUC7LQ9NQ29 371 aaKnown RBP4.49□□□□□ -1.69
SUB1-202ENST00000502453 KMT5AQ9NQR1 393 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms