RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 TNP2Q05952 138 aa5.6□□□□□ -1.51
HMGB1P21-201ENST00000502313 TKFCQ3LXA3 575 aa5.6□□□□□ -1.51
HMGB1P21-201ENST00000502313 BRDTQ58F21 947 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P21-201ENST00000502313 ARSHQ5FYA8 562 aa5.6□□□□□ -1.51
HMGB1P21-201ENST00000502313 DHX32Q7L7V1 743 aaKnown RBP5.6□□□□□ -1.51
HMGB1P21-201ENST00000502313 ERMP1Q7Z2K6 904 aa5.6□□□□□ -1.51
HMGB1P21-201ENST00000502313 HOMER1Q86YM7 354 aa5.6□□□□□ -1.51
HMGB1P21-201ENST00000502313 CCDC155Q8N6L0 562 aa5.6□□□□□ -1.51
HMGB1P21-201ENST00000502313 GPATCH11Q8N954 259 aa5.6□□□□□ -1.51
HMGB1P21-201ENST00000502313 ASAP3Q8TDY4 903 aa5.6□□□□□ -1.51
HMGB1P21-201ENST00000502313 IL17RAQ96F46 866 aa5.6□□□□□ -1.51
HMGB1P21-201ENST00000502313 OSMRQ99650 979 aa5.6□□□□□ -1.51
HMGB1P21-201ENST00000502313 SPON2Q9BUD6 331 aa5.6□□□□□ -1.51
HMGB1P21-201ENST00000502313 LATS2Q9NRM7 1088 aa5.6□□□□□ -1.51
HMGB1P21-201ENST00000502313 GINM1Q9NU53 330 aa5.6□□□□□ -1.51
HMGB1P21-201ENST00000502313 TLR7Q9NYK1 1049 aaKnown RBP5.6□□□□□ -1.51
HMGB1P21-201ENST00000502313 SENP3-EIF4A1A0A087X0R7 540 aa5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 TMEM238LA0A1B0GVL6 79 aa5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 SOBPA7XYQ1 873 aa5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 MAP3K6O95382 1288 aa5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 LDHAP00338 332 aaKnown RBP5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 EIF2AK2P19525 551 aaKnown RBP5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 FGFR3P22607 806 aa5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 GRNP28799 593 aaKnown RBP5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 GBP2P32456 591 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 OS9Q13438 667 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 SQSTM1Q13501 440 aa5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 MAP3K11Q16584 847 aa5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 SYCP2LQ5T4T6 812 aa5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 PRPF40BQ6NWY9 871 aaKnown RBP5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 RAB44Q7Z6P3 723 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 KIAA0825Q8IV33 1275 aa5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 TRPM4Q8TD43 1214 aa5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 GTPBP3Q969Y2 492 aaKnown RBP5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 SLC39A13Q96H72 371 aa5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 MPHOSPH6Q99547 160 aaKnown RBP5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 APBA2Q99767 749 aa5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 UBE2OQ9C0C9 1292 aaKnown RBP5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 CHST12Q9NRB3 414 aa5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 KBTBD4Q9NVX7 518 aa5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 BSDC1Q9NW68 430 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 GPN3Q9UHW5 284 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 LEMD3Q9Y2U8 911 aa5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 SAMM50Q9Y512 469 aa5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 COMMD10Q9Y6G5 202 aa5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 RPS6KL1Q9Y6S9 549 aa5.59□□□□□ -1.51
HMGB1P21-201ENST00000502313 UHRF1BP1LA0JNW5 1464 aa5.58□□□□□ -1.52
HMGB1P21-201ENST00000502313 F6X3S4 739 aa5.58□□□□□ -1.52
HMGB1P21-201ENST00000502313 ST8SIA5O15466 376 aa5.58□□□□□ -1.52
HMGB1P21-201ENST00000502313 BNIP3LO60238 219 aa5.58□□□□□ -1.52
HMGB1P21-201ENST00000502313 FBXO24O75426 580 aa5.58□□□□□ -1.52
HMGB1P21-201ENST00000502313 SMNDC1O75940 238 aaKnown RBP eCLIP5.58□□□□□ -1.52
HMGB1P21-201ENST00000502313 VIL1P09327 827 aaKnown RBP5.58□□□□□ -1.52
HMGB1P21-201ENST00000502313 NRLP54845 237 aa5.58□□□□□ -1.52
HMGB1P21-201ENST00000502313 LRRC41Q15345 812 aa5.58□□□□□ -1.52
HMGB1P21-201ENST00000502313 TPTE2Q6XPS3 522 aa5.58□□□□□ -1.52
HMGB1P21-201ENST00000502313 PNISRQ8TF01 805 aaKnown RBP5.58□□□□□ -1.52
HMGB1P21-201ENST00000502313 ZKSCAN3Q9BRR0 538 aa5.58□□□□□ -1.52
HMGB1P21-201ENST00000502313 TMX1Q9H3N1 280 aa5.58□□□□□ -1.52
HMGB1P21-201ENST00000502313 ADAMTS1Q9UHI8 967 aa5.58□□□□□ -1.52
HMGB1P21-201ENST00000502313 SFMBT1Q9UHJ3 866 aa5.58□□□□□ -1.52
HMGB1P21-201ENST00000502313 SALL4Q9UJQ4 1053 aa5.58□□□□□ -1.52
HMGB1P21-201ENST00000502313 IQGAP2Q13576 1575 aa5.58□□□□□ -1.52
HMGB1P21-201ENST00000502313 MAPKBP1O60336 1514 aa5.58□□□□□ -1.52
HMGB1P21-201ENST00000502313 EEA1Q15075 1411 aa5.57□□□□□ -1.52
HMGB1P21-201ENST00000502313 ADCY10Q96PN6 1610 aa5.57□□□□□ -1.52
HMGB1P21-201ENST00000502313 SLC35F4A4IF30 521 aa5.57□□□□□ -1.52
HMGB1P21-201ENST00000502313 KIF4AO95239 1232 aa5.57□□□□□ -1.52
HMGB1P21-201ENST00000502313 BMP4P12644 408 aa5.57□□□□□ -1.52
HMGB1P21-201ENST00000502313 ITGA6P23229 1130 aa5.57□□□□□ -1.52
HMGB1P21-201ENST00000502313 EXOSC10Q01780 885 aaKnown RBP5.57□□□□□ -1.52
HMGB1P21-201ENST00000502313 MLLT1Q03111 559 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P21-201ENST00000502313 PPP2R3AQ06190 1150 aa5.57□□□□□ -1.52
HMGB1P21-201ENST00000502313 SAFB2Q14151 953 aaKnown RBP eCLIP5.57□□□□□ -1.52
HMGB1P21-201ENST00000502313 DHX8Q14562 1220 aaKnown RBP5.57□□□□□ -1.52
HMGB1P21-201ENST00000502313 C21orf62-AS1Q17RA5 79 aa5.57□□□□□ -1.52
HMGB1P21-201ENST00000502313 SNAP47Q5SQN1 464 aa5.57□□□□□ -1.52
HMGB1P21-201ENST00000502313 C16orf86Q6ZW13 317 aa5.57□□□□□ -1.52
HMGB1P21-201ENST00000502313 SV2BQ7L1I2 683 aa5.57□□□□□ -1.52
HMGB1P21-201ENST00000502313 LRP10Q7Z4F1 713 aa5.57□□□□□ -1.52
HMGB1P21-201ENST00000502313 ANAPC16Q96DE5 110 aa5.57□□□□□ -1.52
HMGB1P21-201ENST00000502313 ZNF837Q96EG3 531 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P21-201ENST00000502313 EAF1Q96JC9 268 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P21-201ENST00000502313 ABCB6Q9NP58 842 aa5.57□□□□□ -1.52
HMGB1P21-201ENST00000502313 ST7Q9NRC1 585 aa5.57□□□□□ -1.52
HMGB1P21-201ENST00000502313 ZFATQ9P243 1243 aa5.57□□□□□ -1.52
HMGB1P21-201ENST00000502313 R3HCC1Q9Y3T6 440 aaKnown RBP5.57□□□□□ -1.52
HMGB1P21-201ENST00000502313 MINDY4BA8MYZ0 360 aa5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 PDE2AO00408 941 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 KIF3BO15066 747 aa5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 TSPAN6O43657 245 aa5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 POU3F3P20264 500 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 GPLD1P80108 840 aa5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 NFE2Q16621 373 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 DBN1Q16643 649 aa5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 PEAR1Q5VY43 1037 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 CCSAPQ6IQ19 270 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 CCNJLQ8IV13 435 aa5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 CELF2-AS1Q8N7Q2 184 aa5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 DDX54Q8TDD1 881 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms