RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 BAZ2AQ9UIF9 1905 aaKnown RBP23.5■■□□□ 1.35
LINC01550-201ENST00000499006 GPAA1O43292 621 aa23.49■■□□□ 1.35
LINC01550-201ENST00000499006 MBD4O95243 580 aa23.49■■□□□ 1.35
LINC01550-201ENST00000499006 DYNLL1P63167 89 aaKnown RBP23.49■■□□□ 1.35
LINC01550-201ENST00000499006 AIDAQ96BJ3 306 aa23.49■■□□□ 1.35
LINC01550-201ENST00000499006 STRBPQ96SI9 672 aaKnown RBP23.49■■□□□ 1.35
LINC01550-201ENST00000499006 MYOZ2Q9NPC6 264 aa23.49■■□□□ 1.35
LINC01550-201ENST00000499006 CCDC171Q6TFL3 1326 aa23.49■■□□□ 1.35
LINC01550-201ENST00000499006 BAG3O95817 575 aa23.49■■□□□ 1.35
LINC01550-201ENST00000499006 CERS3Q8IU89 383 aa23.49■■□□□ 1.35
LINC01550-201ENST00000499006 LCORLQ8N3X6 602 aa23.49■■□□□ 1.35
LINC01550-201ENST00000499006 POLR2AP24928 1970 aaKnown RBP23.48■■□□□ 1.35
LINC01550-201ENST00000499006 MYH1P12882 1939 aa23.48■■□□□ 1.35
LINC01550-201ENST00000499006 SPDYE2BA6NHP3 402 aa23.48■■□□□ 1.35
LINC01550-201ENST00000499006 EGFRP00533 1210 aa23.48■■□□□ 1.35
LINC01550-201ENST00000499006 SPDYE6P0CI01 402 aa23.48■■□□□ 1.35
LINC01550-201ENST00000499006 EPS15P42566 896 aa23.48■■□□□ 1.35
LINC01550-201ENST00000499006 RBM5P52756 815 aaKnown RBP eCLIP23.48■■□□□ 1.35
LINC01550-201ENST00000499006 RHBDL3P58872 404 aa23.48■■□□□ 1.35
LINC01550-201ENST00000499006 PRMT6Q96LA8 375 aaPredicted RBP23.48■■□□□ 1.35
LINC01550-201ENST00000499006 ARMT1Q9H993 441 aa23.48■■□□□ 1.35
LINC01550-201ENST00000499006 NAV1Q8NEY1 1877 aa23.48■■□□□ 1.35
LINC01550-201ENST00000499006 H7C1D1 291 aa23.47■■□□□ 1.35
LINC01550-201ENST00000499006 DLGAP5Q15398 846 aa23.47■■□□□ 1.35
LINC01550-201ENST00000499006 NOL10Q9BSC4 688 aaKnown RBP23.47■■□□□ 1.35
LINC01550-201ENST00000499006 DDX60LQ5H9U9 1706 aaKnown RBP23.46■■□□□ 1.35
LINC01550-201ENST00000499006 PLCG2P16885 1265 aa23.46■■□□□ 1.35
LINC01550-201ENST00000499006 MFAP1P55081 439 aaKnown RBP23.46■■□□□ 1.35
LINC01550-201ENST00000499006 CDC42EP5Q6NZY7 148 aa23.46■■□□□ 1.35
LINC01550-201ENST00000499006 SAMD7Q7Z3H4 446 aa23.46■■□□□ 1.35
LINC01550-201ENST00000499006 SH3RF3Q8TEJ3 882 aaPredicted RBP23.46■■□□□ 1.35
LINC01550-201ENST00000499006 WNT10BO00744 389 aa23.45■■□□□ 1.34
LINC01550-201ENST00000499006 FOXP2O15409 715 aa23.45■■□□□ 1.34
LINC01550-201ENST00000499006 LMOD1P29536 600 aaPredicted RBP23.45■■□□□ 1.34
LINC01550-201ENST00000499006 POTECB2RU33 542 aa23.44■■□□□ 1.34
LINC01550-201ENST00000499006 BACH2Q9BYV9 841 aa23.44■■□□□ 1.34
LINC01550-201ENST00000499006 SEC24BO95487 1268 aa23.43■■□□□ 1.34
LINC01550-201ENST00000499006 HSPD1P10809 573 aaKnown RBP23.43■■□□□ 1.34
LINC01550-201ENST00000499006 GNAT2P19087 354 aa23.43■■□□□ 1.34
LINC01550-201ENST00000499006 KIF4BQ2VIQ3 1234 aa23.43■■□□□ 1.34
LINC01550-201ENST00000499006 NBPF9Q3BBW0 867 aa23.43■■□□□ 1.34
LINC01550-201ENST00000499006 TBC1D10BQ4KMP7 808 aaPredicted RBP23.43■■□□□ 1.34
LINC01550-201ENST00000499006 VPS53Q5VIR6 699 aa23.43■■□□□ 1.34
LINC01550-201ENST00000499006 TDRD3Q9H7E2 651 aaKnown RBP23.43■■□□□ 1.34
LINC01550-201ENST00000499006 ADARB2Q9NS39 739 aaKnown RBP23.43■■□□□ 1.34
LINC01550-201ENST00000499006 USP40Q9NVE5 1235 aa23.43■■□□□ 1.34
LINC01550-201ENST00000499006 LAMA4Q16363 1823 aa23.43■■□□□ 1.34
LINC01550-201ENST00000499006 LAMB1P07942 1786 aa23.43■■□□□ 1.34
LINC01550-201ENST00000499006 TRPM4Q8TD43 1214 aa23.43■■□□□ 1.34
LINC01550-201ENST00000499006 CRNKL1Q9BZJ0 848 aaKnown RBP23.43■■□□□ 1.34
LINC01550-201ENST00000499006 LSG1Q9H089 658 aaKnown RBP23.43■■□□□ 1.34
LINC01550-201ENST00000499006 HACL1Q9UJ83 578 aa23.43■■□□□ 1.34
LINC01550-201ENST00000499006 RPAP1Q9BWH6 1393 aaPredicted RBP23.42■■□□□ 1.34
LINC01550-201ENST00000499006 GSG1L2A8MUP6 293 aa23.42■■□□□ 1.34
LINC01550-201ENST00000499006 PATL2C9JE40 543 aaKnown RBP23.42■■□□□ 1.34
LINC01550-201ENST00000499006 PRKAB2O43741 272 aa23.42■■□□□ 1.34
LINC01550-201ENST00000499006 PTH1RQ03431 593 aa23.42■■□□□ 1.34
LINC01550-201ENST00000499006 RBM26Q5T8P6 1007 aaKnown RBP23.42■■□□□ 1.34
LINC01550-201ENST00000499006 SLC4A4Q9Y6R1 1079 aa23.42■■□□□ 1.34
LINC01550-201ENST00000499006 WDHD1O75717 1129 aaPredicted RBP23.41■■□□□ 1.34
LINC01550-201ENST00000499006 REC8O95072 547 aa23.41■■□□□ 1.34
LINC01550-201ENST00000499006 HIRAP54198 1017 aaPredicted RBP23.41■■□□□ 1.34
LINC01550-201ENST00000499006 SPDYE2Q495Y8 402 aa23.41■■□□□ 1.34
LINC01550-201ENST00000499006 TEX11Q8IYF3 940 aa23.41■■□□□ 1.34
LINC01550-201ENST00000499006 SDR42E1Q8WUS8 393 aa23.41■■□□□ 1.34
LINC01550-201ENST00000499006 DSCC1Q9BVC3 393 aa23.41■■□□□ 1.34
LINC01550-201ENST00000499006 ANO2Q9NQ90 1003 aa23.41■■□□□ 1.34
LINC01550-201ENST00000499006 MKRN1Q9UHC7 482 aaKnown RBP23.41■■□□□ 1.34
LINC01550-201ENST00000499006 IQCA1LA6NCM1 817 aa23.4■■□□□ 1.34
LINC01550-201ENST00000499006 EIF5BO60841 1220 aaKnown RBP23.4■■□□□ 1.34
LINC01550-201ENST00000499006 KIAA1211Q6ZU35 1233 aa23.4■■□□□ 1.34
LINC01550-201ENST00000499006 MAP4K1Q92918 833 aa23.4■■□□□ 1.34
LINC01550-201ENST00000499006 IDI2Q9BXS1 227 aa23.4■■□□□ 1.34
LINC01550-201ENST00000499006 ATP8A2Q9NTI2 1148 aa23.4■■□□□ 1.34
LINC01550-201ENST00000499006 ZNF70Q9UC06 446 aaPredicted RBP23.4■■□□□ 1.34
LINC01550-201ENST00000499006 MYO1BO43795 1136 aa23.39■■□□□ 1.34
LINC01550-201ENST00000499006 TGFBRAP1Q8WUH2 860 aa23.39■■□□□ 1.34
LINC01550-201ENST00000499006 EPB41L4AQ9HCS5 686 aaPredicted RBP23.39■■□□□ 1.34
LINC01550-201ENST00000499006 DCP1AQ9NPI6 582 aaPredicted RBP23.39■■□□□ 1.34
LINC01550-201ENST00000499006 EPB41L2O43491 1005 aaKnown RBP23.38■■□□□ 1.33
LINC01550-201ENST00000499006 NPM3O75607 178 aaKnown RBP23.38■■□□□ 1.33
LINC01550-201ENST00000499006 EPHX2P34913 555 aa23.38■■□□□ 1.33
LINC01550-201ENST00000499006 ALX1Q15699 326 aa23.38■■□□□ 1.33
LINC01550-201ENST00000499006 GIMAP6Q6P9H5 292 aa23.38■■□□□ 1.33
LINC01550-201ENST00000499006 TAF1DQ9H5J8 278 aaPredicted RBP23.38■■□□□ 1.33
LINC01550-201ENST00000499006 DDX4Q9NQI0 724 aaKnown RBP23.38■■□□□ 1.33
LINC01550-201ENST00000499006 CLRN2A0PK11 232 aa23.37■■□□□ 1.33
LINC01550-201ENST00000499006 CACNB3P54284 484 aa23.37■■□□□ 1.33
LINC01550-201ENST00000499006 NFIAQ12857 509 aa23.37■■□□□ 1.33
LINC01550-201ENST00000499006 FKBP1CQ5VVH2 108 aa23.37■■□□□ 1.33
LINC01550-201ENST00000499006 USP50Q70EL3 339 aaPredicted RBP23.37■■□□□ 1.33
LINC01550-201ENST00000499006 IFNL3Q8IZI9 196 aa23.37■■□□□ 1.33
LINC01550-201ENST00000499006 USP26Q9BXU7 913 aa23.37■■□□□ 1.33
LINC01550-201ENST00000499006 FAM198AQ9UFP1 575 aa23.37■■□□□ 1.33
LINC01550-201ENST00000499006 ZMYM6O95789 1325 aa23.37■■□□□ 1.33
LINC01550-201ENST00000499006 FLT1P17948 1338 aa23.37■■□□□ 1.33
LINC01550-201ENST00000499006 SIPA1L1O43166 1804 aa23.36■■□□□ 1.33
LINC01550-201ENST00000499006 ASTN2O75129 1339 aaPredicted RBP23.36■■□□□ 1.33
LINC01550-201ENST00000499006 USP5P45974 858 aa23.36■■□□□ 1.33
LINC01550-201ENST00000499006 FGAP02671 866 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms