RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	ZBTB42	B2RXF5	422 aa		7.25	□□□□□ -1.25
HMGXB4-208	ENST00000498325	ALX3	O95076	343 aa		7.25	□□□□□ -1.25
HMGXB4-208	ENST00000498325	EPB42	P16452	691 aa		7.25	□□□□□ -1.25
HMGXB4-208	ENST00000498325	LCE1D	Q5T752	114 aa		7.25	□□□□□ -1.25
HMGXB4-208	ENST00000498325	DHX32	Q7L7V1	743 aa	Known RBP	7.25	□□□□□ -1.25
HMGXB4-208	ENST00000498325	STAG2	Q8N3U4	1231 aa		7.25	□□□□□ -1.25
HMGXB4-208	ENST00000498325	TRPM4	Q8TD43	1214 aa		7.25	□□□□□ -1.25
HMGXB4-208	ENST00000498325	C2orf49	Q9BVC5	232 aa	Predicted RBP	7.25	□□□□□ -1.25
HMGXB4-208	ENST00000498325	RNF114	Q9Y508	228 aa		7.25	□□□□□ -1.25
HMGXB4-208	ENST00000498325	USP32	Q8NFA0	1604 aa		7.25	□□□□□ -1.25
HMGXB4-208	ENST00000498325	NPHP3	Q7Z494	1330 aa		7.25	□□□□□ -1.25
HMGXB4-208	ENST00000498325	ADGRF5	Q8IZF2	1346 aa		7.25	□□□□□ -1.25
HMGXB4-208	ENST00000498325	EIF3A	Q14152	1382 aa	Known RBP	7.24	□□□□□ -1.25
HMGXB4-208	ENST00000498325	NRXN3	Q9Y4C0	1643 aa		7.24	□□□□□ -1.25
HMGXB4-208	ENST00000498325	PPL	O60437	1756 aa		7.24	□□□□□ -1.25
HMGXB4-208	ENST00000498325	TGFBR3L	H3BV60	316 aa		7.24	□□□□□ -1.25
HMGXB4-208	ENST00000498325	GP2	P55259	537 aa	Known RBP	7.24	□□□□□ -1.25
HMGXB4-208	ENST00000498325	TMF1	P82094	1093 aa		7.24	□□□□□ -1.25
HMGXB4-208	ENST00000498325	MLLT1	Q03111	559 aa	Predicted RBP	7.24	□□□□□ -1.25
HMGXB4-208	ENST00000498325	CFAP70	Q5T0N1	1121 aa		7.24	□□□□□ -1.25
HMGXB4-208	ENST00000498325	KRT25	Q7Z3Z0	450 aa		7.24	□□□□□ -1.25
HMGXB4-208	ENST00000498325	TMEM130	Q8N3G9	435 aa		7.24	□□□□□ -1.25
HMGXB4-208	ENST00000498325	LARGE2	Q8N3Y3	721 aa		7.24	□□□□□ -1.25
HMGXB4-208	ENST00000498325	KRTAP4-7	Q9BYR0	210 aa		7.24	□□□□□ -1.25
HMGXB4-208	ENST00000498325	MRPL18	Q9H0U6	180 aa	Known RBP	7.24	□□□□□ -1.25
HMGXB4-208	ENST00000498325	SMG9	Q9H0W8	520 aa	Known RBP	7.24	□□□□□ -1.25
HMGXB4-208	ENST00000498325	C14orf93	Q9H972	538 aa	Known RBP	7.24	□□□□□ -1.25
HMGXB4-208	ENST00000498325	RBM19	Q9Y4C8	960 aa	Known RBP	7.24	□□□□□ -1.25
HMGXB4-208	ENST00000498325	ADGRB2	O60241	1585 aa		7.24	□□□□□ -1.25
HMGXB4-208	ENST00000498325	KIF7	Q2M1P5	1343 aa		7.24	□□□□□ -1.25
HMGXB4-208	ENST00000498325	SPATA31A3	Q5VYP0	1347 aa		7.24	□□□□□ -1.25
HMGXB4-208	ENST00000498325	NRXN1	Q9ULB1	1477 aa		7.24	□□□□□ -1.25
HMGXB4-208	ENST00000498325	USP17L3	A6NCW0	530 aa		7.23	□□□□□ -1.25
HMGXB4-208	ENST00000498325	USP17L4	A6NCW7	530 aa		7.23	□□□□□ -1.25
HMGXB4-208	ENST00000498325	PALM3	A6NDB9	673 aa	Predicted RBP	7.23	□□□□□ -1.25
HMGXB4-208	ENST00000498325		F8W735	103 aa	Predicted RBP	7.23	□□□□□ -1.25
HMGXB4-208	ENST00000498325	MED26	O95402	600 aa		7.23	□□□□□ -1.25
HMGXB4-208	ENST00000498325	RTN1	Q16799	776 aa		7.23	□□□□□ -1.25
HMGXB4-208	ENST00000498325	CDCA8	Q53HL2	280 aa		7.23	□□□□□ -1.25
HMGXB4-208	ENST00000498325	USP17L2	Q6R6M4	530 aa		7.23	□□□□□ -1.25
HMGXB4-208	ENST00000498325	USP17L1	Q7RTZ2	530 aa		7.23	□□□□□ -1.25
HMGXB4-208	ENST00000498325	PLEKHM2	Q8IWE5	1019 aa		7.23	□□□□□ -1.25
HMGXB4-208	ENST00000498325	OGFOD1	Q8N543	542 aa		7.23	□□□□□ -1.25
HMGXB4-208	ENST00000498325	DNAJC5G	Q8N7S2	189 aa		7.23	□□□□□ -1.25
HMGXB4-208	ENST00000498325	POLR3GL	Q9BT43	218 aa		7.23	□□□□□ -1.25
HMGXB4-208	ENST00000498325	ZFAT	Q9P243	1243 aa		7.23	□□□□□ -1.25
HMGXB4-208	ENST00000498325	PLCH1	Q4KWH8	1693 aa		7.22	□□□□□ -1.25
HMGXB4-208	ENST00000498325	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	7.22	□□□□□ -1.25
HMGXB4-208	ENST00000498325	GSC2	O15499	205 aa		7.22	□□□□□ -1.25
HMGXB4-208	ENST00000498325	IGLV1-40	P01703	118 aa		7.22	□□□□□ -1.25
HMGXB4-208	ENST00000498325	GPLD1	P80108	840 aa		7.22	□□□□□ -1.25
HMGXB4-208	ENST00000498325	FAM196A	Q6ZSG2	479 aa		7.22	□□□□□ -1.25
HMGXB4-208	ENST00000498325	GAS2L2	Q8NHY3	880 aa		7.22	□□□□□ -1.25
HMGXB4-208	ENST00000498325	SCG3	Q8WXD2	468 aa	Known RBP	7.22	□□□□□ -1.25
HMGXB4-208	ENST00000498325	DMGDH	Q9UI17	866 aa	Known RBP	7.22	□□□□□ -1.25
HMGXB4-208	ENST00000498325	CHD4	Q14839	1912 aa		7.22	□□□□□ -1.25
HMGXB4-208	ENST00000498325	CASZ1	Q86V15	1759 aa		7.22	□□□□□ -1.25
HMGXB4-208	ENST00000498325	NEXMIF	Q5QGS0	1516 aa		7.22	□□□□□ -1.25
HMGXB4-208	ENST00000498325	ROBO2	Q9HCK4	1378 aa		7.21	□□□□□ -1.25
HMGXB4-208	ENST00000498325	PIK3C2G	O75747	1445 aa		7.21	□□□□□ -1.25
HMGXB4-208	ENST00000498325	CCER2	I3L3R5	266 aa		7.21	□□□□□ -1.26
HMGXB4-208	ENST00000498325	DKK1	O94907	266 aa		7.21	□□□□□ -1.26
HMGXB4-208	ENST00000498325	TGFB1	P01137	390 aa		7.21	□□□□□ -1.26
HMGXB4-208	ENST00000498325	GRN	P28799	593 aa	Known RBP	7.21	□□□□□ -1.26
HMGXB4-208	ENST00000498325	ARID4A	P29374	1257 aa	Predicted RBP	7.21	□□□□□ -1.26
HMGXB4-208	ENST00000498325	FZD5	Q13467	585 aa		7.21	□□□□□ -1.26
HMGXB4-208	ENST00000498325	MCM6	Q14566	821 aa		7.21	□□□□□ -1.26
HMGXB4-208	ENST00000498325	GPR162	Q16538	588 aa		7.21	□□□□□ -1.26
HMGXB4-208	ENST00000498325	WWC1	Q8IX03	1113 aa		7.21	□□□□□ -1.26
HMGXB4-208	ENST00000498325	SIX5	Q8N196	739 aa		7.21	□□□□□ -1.26
HMGXB4-208	ENST00000498325	BCS1L	Q9Y276	419 aa		7.21	□□□□□ -1.26
HMGXB4-208	ENST00000498325	RAX	Q9Y2V3	346 aa		7.21	□□□□□ -1.26
HMGXB4-208	ENST00000498325	COG6	Q9Y2V7	657 aa		7.21	□□□□□ -1.26
HMGXB4-208	ENST00000498325	THSD7A	Q9UPZ6	1657 aa		7.21	□□□□□ -1.26
HMGXB4-208	ENST00000498325	SPATA31A5	Q5VU36	1347 aa		7.21	□□□□□ -1.26
HMGXB4-208	ENST00000498325	SPATA31A7	Q8IWB4	1347 aa		7.21	□□□□□ -1.26
HMGXB4-208	ENST00000498325	RARA	P10276	462 aa		7.2	□□□□□ -1.26
HMGXB4-208	ENST00000498325	EIF2AK2	P19525	551 aa	Known RBP	7.2	□□□□□ -1.26
HMGXB4-208	ENST00000498325	TARS	P26639	723 aa	Known RBP	7.2	□□□□□ -1.26
HMGXB4-208	ENST00000498325	INPP5B	P32019	993 aa		7.2	□□□□□ -1.26
HMGXB4-208	ENST00000498325	HFE2	Q6ZVN8	426 aa		7.2	□□□□□ -1.26
HMGXB4-208	ENST00000498325	IFT43	Q96FT9	208 aa		7.2	□□□□□ -1.26
HMGXB4-208	ENST00000498325	ZNF594	Q96JF6	807 aa	Predicted RBP	7.2	□□□□□ -1.26
HMGXB4-208	ENST00000498325	TESK2	Q96S53	571 aa		7.2	□□□□□ -1.26
HMGXB4-208	ENST00000498325	BTG4	Q9NY30	223 aa		7.2	□□□□□ -1.26
HMGXB4-208	ENST00000498325	NWD2	Q9ULI1	1742 aa		7.2	□□□□□ -1.26
HMGXB4-208	ENST00000498325	DLC1	Q96QB1	1528 aa		7.2	□□□□□ -1.26
HMGXB4-208	ENST00000498325	ARID1B	Q8NFD5	2236 aa	Predicted RBP	7.2	□□□□□ -1.26
HMGXB4-208	ENST00000498325	SASH3	O75995	380 aa		7.19	□□□□□ -1.26
HMGXB4-208	ENST00000498325	CENPB	P07199	599 aa	Predicted RBP	7.19	□□□□□ -1.26
HMGXB4-208	ENST00000498325	GLB1	P16278	677 aa		7.19	□□□□□ -1.26
HMGXB4-208	ENST00000498325	IDH3A	P50213	366 aa		7.19	□□□□□ -1.26
HMGXB4-208	ENST00000498325		Q6ZS46	218 aa		7.19	□□□□□ -1.26
HMGXB4-208	ENST00000498325	STOML1	Q9UBI4	398 aa		7.19	□□□□□ -1.26
HMGXB4-208	ENST00000498325	MKRN1	Q9UHC7	482 aa	Known RBP	7.19	□□□□□ -1.26
HMGXB4-208	ENST00000498325	ATP10D	Q9P241	1426 aa		7.18	□□□□□ -1.26
HMGXB4-208	ENST00000498325	NRAP	Q86VF7	1730 aa		7.18	□□□□□ -1.26
HMGXB4-208	ENST00000498325	NRL	P54845	237 aa		7.18	□□□□□ -1.26
HMGXB4-208	ENST00000498325	TMEM132E	Q6IEE7	984 aa		7.18	□□□□□ -1.26
HMGXB4-208	ENST00000498325	SRA1	Q9HD15	236 aa	Known RBP	7.18	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms