RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, human

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTTN-208	ENST00000498223	BAG3	O95817	575 aa		13.8	□□□□□ -0.2
CTTN-208	ENST00000498223	BTD	P43251	543 aa		13.8	□□□□□ -0.2
CTTN-208	ENST00000498223	BMP2KL	Q5H9B9	411 aa		13.8	□□□□□ -0.2
CTTN-208	ENST00000498223	MIGA1	Q8NAN2	632 aa		13.8	□□□□□ -0.2
CTTN-208	ENST00000498223	TMOD2	Q9NZR1	351 aa		13.8	□□□□□ -0.2
CTTN-208	ENST00000498223	DAGLA	Q9Y4D2	1042 aa		13.8	□□□□□ -0.2
CTTN-208	ENST00000498223	FOCAD	Q5VW36	1801 aa		13.8	□□□□□ -0.2
CTTN-208	ENST00000498223	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.8	□□□□□ -0.2
CTTN-208	ENST00000498223	MAGEB6P1	A0A0J9YX57	407 aa		13.79	□□□□□ -0.2
CTTN-208	ENST00000498223	ITGBL1	O95965	494 aa	Predicted RBP	13.79	□□□□□ -0.2
CTTN-208	ENST00000498223	SLFNL1	Q499Z3	407 aa		13.79	□□□□□ -0.2
CTTN-208	ENST00000498223	USP50	Q70EL3	339 aa	Predicted RBP	13.79	□□□□□ -0.2
CTTN-208	ENST00000498223	TRPM4	Q8TD43	1214 aa		13.79	□□□□□ -0.2
CTTN-208	ENST00000498223	PRMT6	Q96LA8	375 aa	Predicted RBP	13.79	□□□□□ -0.2
CTTN-208	ENST00000498223	ZDHHC15	Q96MV8	337 aa		13.79	□□□□□ -0.2
CTTN-208	ENST00000498223	MRI	Q9BWK5	157 aa		13.79	□□□□□ -0.2
CTTN-208	ENST00000498223	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
CTTN-208	ENST00000498223	PCDHAC2	Q9Y5I4	1007 aa		13.79	□□□□□ -0.2
CTTN-208	ENST00000498223	CLRN2	A0PK11	232 aa		13.78	□□□□□ -0.2
CTTN-208	ENST00000498223	SPDYE2B	A6NHP3	402 aa		13.78	□□□□□ -0.2
CTTN-208	ENST00000498223	SPDYE6	P0CI01	402 aa		13.78	□□□□□ -0.2
CTTN-208	ENST00000498223	UBE3C	Q15386	1083 aa		13.78	□□□□□ -0.2
CTTN-208	ENST00000498223	NBPF9	Q3BBW0	867 aa		13.78	□□□□□ -0.2
CTTN-208	ENST00000498223	TMED8	Q6PL24	325 aa	Predicted RBP	13.78	□□□□□ -0.2
CTTN-208	ENST00000498223	CASC1	Q6TDU7	716 aa		13.78	□□□□□ -0.2
CTTN-208	ENST00000498223	ZNF384	Q8TF68	577 aa		13.78	□□□□□ -0.2
CTTN-208	ENST00000498223	APPBP2	Q92624	585 aa		13.78	□□□□□ -0.2
CTTN-208	ENST00000498223	AIDA	Q96BJ3	306 aa		13.78	□□□□□ -0.2
CTTN-208	ENST00000498223	TDRD3	Q9H7E2	651 aa	Known RBP	13.78	□□□□□ -0.2
CTTN-208	ENST00000498223	VEZT	Q9HBM0	779 aa		13.78	□□□□□ -0.2
CTTN-208	ENST00000498223	USP40	Q9NVE5	1235 aa		13.78	□□□□□ -0.2
CTTN-208	ENST00000498223	NAV1	Q8NEY1	1877 aa		13.78	□□□□□ -0.2
CTTN-208	ENST00000498223	GPR75-ASB3	A0A0A6YYF3	556 aa		13.77	□□□□□ -0.21
CTTN-208	ENST00000498223	TCRBV5S4A2T	A0A5A2	114 aa		13.77	□□□□□ -0.21
CTTN-208	ENST00000498223	TMEM88B	A6NKF7	163 aa		13.77	□□□□□ -0.21
CTTN-208	ENST00000498223	WNT10B	O00744	389 aa		13.77	□□□□□ -0.21
CTTN-208	ENST00000498223	GAK	O14976	1311 aa		13.77	□□□□□ -0.21
CTTN-208	ENST00000498223	MBD4	O95243	580 aa		13.77	□□□□□ -0.21
CTTN-208	ENST00000498223	PCNT	O95613	3336 aa		13.77	□□□□□ -0.21
CTTN-208	ENST00000498223	EGFR	P00533	1210 aa		13.77	□□□□□ -0.21
CTTN-208	ENST00000498223	CHGB	P05060	677 aa		13.77	□□□□□ -0.21
CTTN-208	ENST00000498223	PLCG2	P16885	1265 aa		13.77	□□□□□ -0.21
CTTN-208	ENST00000498223	DYNLL1	P63167	89 aa	Known RBP	13.77	□□□□□ -0.21
CTTN-208	ENST00000498223	NMI	Q13287	307 aa	Predicted RBP	13.77	□□□□□ -0.21
CTTN-208	ENST00000498223	RFX7	Q2KHR2	1363 aa		13.77	□□□□□ -0.21
CTTN-208	ENST00000498223	CWC27	Q6UX04	472 aa	Known RBP	13.77	□□□□□ -0.21
CTTN-208	ENST00000498223	ADGRA1	Q86SQ6	560 aa		13.77	□□□□□ -0.21
CTTN-208	ENST00000498223	MTMR14	Q8NCE2	650 aa		13.77	□□□□□ -0.21
CTTN-208	ENST00000498223	RUFY2	Q8WXA3	655 aa		13.77	□□□□□ -0.21
CTTN-208	ENST00000498223	FAM163A	Q96GL9	167 aa	Predicted RBP	13.77	□□□□□ -0.21
CTTN-208	ENST00000498223	MKRN1	Q9UHC7	482 aa	Known RBP	13.77	□□□□□ -0.21
CTTN-208	ENST00000498223	MYH8	P13535	1937 aa		13.76	□□□□□ -0.21
CTTN-208	ENST00000498223	CNTNAP1	P78357	1384 aa		13.76	□□□□□ -0.21
CTTN-208	ENST00000498223	HSPA1A	P0DMV8	641 aa	Known RBP	13.76	□□□□□ -0.21
CTTN-208	ENST00000498223	HSPA1B	P0DMV9	641 aa	Known RBP	13.76	□□□□□ -0.21
CTTN-208	ENST00000498223	ZMYM1	Q5SVZ6	1142 aa		13.76	□□□□□ -0.21
CTTN-208	ENST00000498223	MAP1S	Q66K74	1059 aa	Predicted RBP	13.76	□□□□□ -0.21
CTTN-208	ENST00000498223	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.76	□□□□□ -0.21
CTTN-208	ENST00000498223	CDC42EP5	Q6NZY7	148 aa		13.76	□□□□□ -0.21
CTTN-208	ENST00000498223	TICAM2	Q86XR7	235 aa		13.76	□□□□□ -0.21
CTTN-208	ENST00000498223	TEX11	Q8IYF3	940 aa		13.76	□□□□□ -0.21
CTTN-208	ENST00000498223	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.76	□□□□□ -0.21
CTTN-208	ENST00000498223	DCPS	Q96C86	337 aa	Known RBP	13.76	□□□□□ -0.21
CTTN-208	ENST00000498223	ARMT1	Q9H993	441 aa		13.76	□□□□□ -0.21
CTTN-208	ENST00000498223	ZNF70	Q9UC06	446 aa	Predicted RBP	13.76	□□□□□ -0.21
CTTN-208	ENST00000498223	TCP10L2	B9ZVM9	353 aa		13.75	□□□□□ -0.21
CTTN-208	ENST00000498223	CDC45	O75419	566 aa		13.75	□□□□□ -0.21
CTTN-208	ENST00000498223	CHML	P26374	656 aa		13.75	□□□□□ -0.21
CTTN-208	ENST00000498223	USP5	P45974	858 aa		13.75	□□□□□ -0.21
CTTN-208	ENST00000498223	HIRA	P54198	1017 aa	Predicted RBP	13.75	□□□□□ -0.21
CTTN-208	ENST00000498223	MCMDC2	Q4G0Z9	681 aa		13.75	□□□□□ -0.21
CTTN-208	ENST00000498223	ANGEL2	Q5VTE6	544 aa	Known RBP	13.75	□□□□□ -0.21
CTTN-208	ENST00000498223	CERS3	Q8IU89	383 aa		13.75	□□□□□ -0.21
CTTN-208	ENST00000498223	OSBP2	Q969R2	916 aa		13.75	□□□□□ -0.21
CTTN-208	ENST00000498223	FAM227B	Q96M60	508 aa		13.75	□□□□□ -0.21
CTTN-208	ENST00000498223	SEC62	Q99442	399 aa	Known RBP	13.75	□□□□□ -0.21
CTTN-208	ENST00000498223	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.75	□□□□□ -0.21
CTTN-208	ENST00000498223	PUS7L	Q9H0K6	701 aa	Known RBP	13.75	□□□□□ -0.21
CTTN-208	ENST00000498223	HELLS	Q9NRZ9	838 aa		13.75	□□□□□ -0.21
CTTN-208	ENST00000498223	GGA3	Q9NZ52	723 aa		13.75	□□□□□ -0.21
CTTN-208	ENST00000498223	ASTN2	O75129	1339 aa	Predicted RBP	13.74	□□□□□ -0.21
CTTN-208	ENST00000498223		A0A0D9SFI3	127 aa		13.74	□□□□□ -0.21
CTTN-208	ENST00000498223		M0R2C6	588 aa		13.74	□□□□□ -0.21
CTTN-208	ENST00000498223	APP	P05067	770 aa		13.74	□□□□□ -0.21
CTTN-208	ENST00000498223	TNNI2	P48788	182 aa		13.74	□□□□□ -0.21
CTTN-208	ENST00000498223	CACNB3	P54284	484 aa		13.74	□□□□□ -0.21
CTTN-208	ENST00000498223	MFAP1	P55081	439 aa	Known RBP	13.74	□□□□□ -0.21
CTTN-208	ENST00000498223	PPP4C	P60510	307 aa		13.74	□□□□□ -0.21
CTTN-208	ENST00000498223	PICALM	Q13492	652 aa		13.74	□□□□□ -0.21
CTTN-208	ENST00000498223	SPDYE2	Q495Y8	402 aa		13.74	□□□□□ -0.21
CTTN-208	ENST00000498223	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.74	□□□□□ -0.21
CTTN-208	ENST00000498223	LCORL	Q8N3X6	602 aa		13.74	□□□□□ -0.21
CTTN-208	ENST00000498223	DDRGK1	Q96HY6	314 aa		13.74	□□□□□ -0.21
CTTN-208	ENST00000498223	ZBED3	Q96IU2	234 aa	Predicted RBP	13.74	□□□□□ -0.21
CTTN-208	ENST00000498223	TRPM7	Q96QT4	1865 aa		13.74	□□□□□ -0.21
CTTN-208	ENST00000498223	GPAA1	O43292	621 aa		13.73	□□□□□ -0.21
CTTN-208	ENST00000498223	TCP10	Q12799	353 aa		13.73	□□□□□ -0.21
CTTN-208	ENST00000498223	CCDC129	Q6ZRS4	1044 aa		13.73	□□□□□ -0.21
CTTN-208	ENST00000498223	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.73	□□□□□ -0.21
CTTN-208	ENST00000498223	SULF1	Q8IWU6	871 aa		13.73	□□□□□ -0.21

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