RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 PRR23CQ6ZRP0 262 aa8.16□□□□□ -1.1
SSR3-209ENST00000498205 PDZD3Q86UT5 571 aa8.16□□□□□ -1.1
SSR3-209ENST00000498205 AOC2O75106 756 aa8.15□□□□□ -1.1
SSR3-209ENST00000498205 TRIM37O94972 964 aa8.15□□□□□ -1.1
SSR3-209ENST00000498205 ZNF16P17020 682 aaPredicted RBP8.15□□□□□ -1.1
SSR3-209ENST00000498205 KIF4BQ2VIQ3 1234 aa8.15□□□□□ -1.1
SSR3-209ENST00000498205 CBX8Q9HC52 389 aa8.15□□□□□ -1.1
SSR3-209ENST00000498205 RAXQ9Y2V3 346 aa8.15□□□□□ -1.1
SSR3-209ENST00000498205 K7ELQ4 463 aaPredicted RBP8.14□□□□□ -1.11
SSR3-209ENST00000498205 DLGAP3O95886 979 aa8.14□□□□□ -1.11
SSR3-209ENST00000498205 ADH5P11766 374 aa8.14□□□□□ -1.11
SSR3-209ENST00000498205 LMNB1P20700 586 aa8.14□□□□□ -1.11
SSR3-209ENST00000498205 BMP6P22004 513 aa8.14□□□□□ -1.11
SSR3-209ENST00000498205 PREPP48147 710 aa8.14□□□□□ -1.11
SSR3-209ENST00000498205 ZNF252P-AS1Q0IIN9 211 aa8.14□□□□□ -1.11
SSR3-209ENST00000498205 LLGL2Q6P1M3 1020 aa8.14□□□□□ -1.11
SSR3-209ENST00000498205 CLEC10AQ8IUN9 316 aa8.14□□□□□ -1.11
SSR3-209ENST00000498205 KCNB2Q92953 911 aa8.14□□□□□ -1.11
SSR3-209ENST00000498205 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.13□□□□□ -1.11
SSR3-209ENST00000498205 DYRK3O43781 588 aa8.13□□□□□ -1.11
SSR3-209ENST00000498205 FBXO24O75426 580 aa8.13□□□□□ -1.11
SSR3-209ENST00000498205 CTSBP07858 339 aa8.13□□□□□ -1.11
SSR3-209ENST00000498205 USP11P51784 963 aa8.13□□□□□ -1.11
SSR3-209ENST00000498205 TAGLNQ01995 201 aaKnown RBP8.13□□□□□ -1.11
SSR3-209ENST00000498205 PWP1Q13610 501 aa8.13□□□□□ -1.11
SSR3-209ENST00000498205 AKAP4Q5JQC9 854 aa8.13□□□□□ -1.11
SSR3-209ENST00000498205 PCNX4Q63HM2 1172 aa8.13□□□□□ -1.11
SSR3-209ENST00000498205 FAM20CQ8IXL6 584 aa8.13□□□□□ -1.11
SSR3-209ENST00000498205 ARMC10Q8N2F6 343 aa8.13□□□□□ -1.11
SSR3-209ENST00000498205 FAM161BQ96MY7 647 aa8.13□□□□□ -1.11
SSR3-209ENST00000498205 WDR18Q9BV38 432 aa8.13□□□□□ -1.11
SSR3-209ENST00000498205 CCDC86Q9H6F5 360 aaKnown RBP8.13□□□□□ -1.11
SSR3-209ENST00000498205 RNF19AQ9NV58 838 aa8.13□□□□□ -1.11
SSR3-209ENST00000498205 CACNA2D2Q9NY47 1150 aa8.13□□□□□ -1.11
SSR3-209ENST00000498205 STOML1Q9UBI4 398 aa8.13□□□□□ -1.11
SSR3-209ENST00000498205 CTSHP09668 335 aa8.12□□□□□ -1.11
SSR3-209ENST00000498205 FURINP09958 794 aa8.12□□□□□ -1.11
SSR3-209ENST00000498205 BMP3P12645 472 aa8.12□□□□□ -1.11
SSR3-209ENST00000498205 ID3Q02535 119 aa8.12□□□□□ -1.11
SSR3-209ENST00000498205 MRPL58Q14197 206 aaKnown RBP8.12□□□□□ -1.11
SSR3-209ENST00000498205 MAP1SQ66K74 1059 aaPredicted RBP8.12□□□□□ -1.11
SSR3-209ENST00000498205 ACSBG1Q96GR2 724 aa8.12□□□□□ -1.11
SSR3-209ENST00000498205 ATXN3LQ9H3M9 355 aa8.12□□□□□ -1.11
SSR3-209ENST00000498205 GSX1Q9H4S2 264 aaPredicted RBP8.12□□□□□ -1.11
SSR3-209ENST00000498205 ECEL1O95672 775 aa8.11□□□□□ -1.11
SSR3-209ENST00000498205 CELA3AP09093 270 aa8.11□□□□□ -1.11
SSR3-209ENST00000498205 TTBK2Q6IQ55 1244 aa8.11□□□□□ -1.11
SSR3-209ENST00000498205 C2CD4AQ8NCU7 369 aaPredicted RBP8.11□□□□□ -1.11
SSR3-209ENST00000498205 FAM83CQ9BQN1 747 aa8.11□□□□□ -1.11
SSR3-209ENST00000498205 AP4E1Q9UPM8 1137 aa8.11□□□□□ -1.11
SSR3-209ENST00000498205 ADAM23O75077 832 aa8.1□□□□□ -1.11
SSR3-209ENST00000498205 PAGE1O75459 146 aa8.1□□□□□ -1.11
SSR3-209ENST00000498205 LIG1P18858 919 aa8.1□□□□□ -1.11
SSR3-209ENST00000498205 VAMP1P23763 118 aa8.1□□□□□ -1.11
SSR3-209ENST00000498205 MAP7Q14244 749 aa8.1□□□□□ -1.11
SSR3-209ENST00000498205 MEI1Q5TIA1 1274 aa8.1□□□□□ -1.11
SSR3-209ENST00000498205 EZH1Q92800 747 aaPredicted RBP8.1□□□□□ -1.11
SSR3-209ENST00000498205 ZC3H12CQ9C0D7 883 aaKnown RBP8.1□□□□□ -1.11
SSR3-209ENST00000498205 KCNF1Q9H3M0 494 aa8.1□□□□□ -1.11
SSR3-209ENST00000498205 CRIM1Q9NZV1 1036 aa8.1□□□□□ -1.11
SSR3-209ENST00000498205 TMPRSS2O15393 492 aa8.09□□□□□ -1.11
SSR3-209ENST00000498205 ZNF862O60290 1169 aa8.09□□□□□ -1.11
SSR3-209ENST00000498205 ERVK-24P63145 666 aa8.09□□□□□ -1.11
SSR3-209ENST00000498205 AGMOQ6ZNB7 445 aa8.09□□□□□ -1.11
SSR3-209ENST00000498205 BEND4Q6ZU67 534 aa8.09□□□□□ -1.11
SSR3-209ENST00000498205 DYMQ7RTS9 669 aa8.09□□□□□ -1.11
SSR3-209ENST00000498205 RGS22Q8NE09 1264 aa8.09□□□□□ -1.11
SSR3-209ENST00000498205 GIMAP7Q8NHV1 300 aa8.09□□□□□ -1.11
SSR3-209ENST00000498205 STK35Q8TDR2 534 aa8.09□□□□□ -1.11
SSR3-209ENST00000498205 GPBAR1Q8TDU6 330 aa8.09□□□□□ -1.11
SSR3-209ENST00000498205 SEMA6BQ9H3T3 888 aa8.09□□□□□ -1.11
SSR3-209ENST00000498205 DRD2P14416 443 aa8.08□□□□□ -1.12
SSR3-209ENST00000498205 MAP4P27816 1152 aaKnown RBP8.08□□□□□ -1.12
SSR3-209ENST00000498205 RXRBP28702 533 aa8.08□□□□□ -1.12
SSR3-209ENST00000498205 ASPAP45381 313 aa8.08□□□□□ -1.12
SSR3-209ENST00000498205 LIG3P49916 1009 aa8.08□□□□□ -1.12
SSR3-209ENST00000498205 PAOXQ6QHF9 649 aa8.08□□□□□ -1.12
SSR3-209ENST00000498205 CCDC84Q86UT8 332 aaPredicted RBP8.08□□□□□ -1.12
SSR3-209ENST00000498205 RSRP1Q9BUV0 290 aa8.08□□□□□ -1.12
SSR3-209ENST00000498205 PIDD1Q9HB75 910 aa8.08□□□□□ -1.12
SSR3-209ENST00000498205 PCDHGC5Q9Y5F6 944 aa8.08□□□□□ -1.12
SSR3-209ENST00000498205 ACTL7BQ9Y614 415 aa8.08□□□□□ -1.12
SSR3-209ENST00000498205 FAM95CA0A1B0GW59 222 aa8.07□□□□□ -1.12
SSR3-209ENST00000498205 ZC3H12AQ5D1E8 599 aaKnown RBP8.07□□□□□ -1.12
SSR3-209ENST00000498205 RELL1Q8IUW5 271 aa8.07□□□□□ -1.12
SSR3-209ENST00000498205 IGLV1-40P01703 118 aa8.06□□□□□ -1.12
SSR3-209ENST00000498205 CPSF6Q16630 551 aaKnown RBP eCLIP8.06□□□□□ -1.12
SSR3-209ENST00000498205 SGO2Q562F6 1265 aa8.06□□□□□ -1.12
SSR3-209ENST00000498205 RNF43Q68DV7 783 aa8.06□□□□□ -1.12
SSR3-209ENST00000498205 WDR89Q96FK6 387 aaPredicted RBP8.06□□□□□ -1.12
SSR3-209ENST00000498205 FANCD2OSQ96PS1 177 aa8.06□□□□□ -1.12
SSR3-209ENST00000498205 DBNDD2Q9BQY9 259 aa8.06□□□□□ -1.12
SSR3-209ENST00000498205 MIR1-1HGQ9H1L0 117 aa8.06□□□□□ -1.12
SSR3-209ENST00000498205 ACSS3Q9H6R3 686 aa8.06□□□□□ -1.12
SSR3-209ENST00000498205 C7orf69Q9H7B7 122 aa8.06□□□□□ -1.12
SSR3-209ENST00000498205 PPP1R9AQ9ULJ8 1098 aa8.06□□□□□ -1.12
SSR3-209ENST00000498205 FSTP19883 344 aa8.05□□□□□ -1.12
SSR3-209ENST00000498205 NFIAQ12857 509 aa8.05□□□□□ -1.12
SSR3-209ENST00000498205 HS2ST1Q7LGA3 356 aa8.05□□□□□ -1.12
SSR3-209ENST00000498205 TRIM42Q8IWZ5 723 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms