RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 PCCAP05165 728 aaPredicted RBP1.77□□□□□ -2.13
XRN1-214ENST00000498077 KRT19P08727 400 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 BMP2P12643 396 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 GSPT1P15170 499 aaKnown RBP1.77□□□□□ -2.13
XRN1-214ENST00000498077 KCNA6P17658 529 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 ALAS2P22557 587 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 SLC1A6P48664 564 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 HNRNPMP52272 730 aaKnown RBP eCLIP1.77□□□□□ -2.13
XRN1-214ENST00000498077 C1orf53Q5VUE5 145 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 VASH1Q7L8A9 365 aaPredicted RBP1.77□□□□□ -2.13
XRN1-214ENST00000498077 CCDC54Q8NEL0 328 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 PRR7Q8TB68 274 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 LMLNQ96KR4 655 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 CRAMP1Q96RY5 1269 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 NDEL1Q9GZM8 345 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 TIMELESSQ9UNS1 1208 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 ZDHHC9Q9Y397 364 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 TRANK1O15050 2925 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 TRIM13O60858 407 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 DXOO77932 396 aaKnown RBP1.77□□□□□ -2.13
XRN1-214ENST00000498077 RHOQP17081 205 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 UBTFP17480 764 aaKnown RBP1.77□□□□□ -2.13
XRN1-214ENST00000498077 MCM4P33991 863 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 MAP2K2P36507 400 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 TPM4P67936 248 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 SLC29A2Q14542 456 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 VPS72Q15906 364 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 CEP135Q66GS9 1140 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 GDF6Q6KF10 455 aaPredicted RBP1.77□□□□□ -2.13
XRN1-214ENST00000498077 DDX1Q92499 740 aaKnown RBP1.77□□□□□ -2.13
XRN1-214ENST00000498077 SKA1Q96BD8 255 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 OSBPL1AQ9BXW6 950 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 BCL11AQ9H165 835 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 TNMDQ9H2S6 317 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 POLMQ9NP87 494 aaPredicted RBP1.77□□□□□ -2.13
XRN1-214ENST00000498077 MTMR10Q9NXD2 777 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 PCDHA4Q9UN74 947 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 ANGEL1Q9UNK9 670 aaKnown RBP1.77□□□□□ -2.13
XRN1-214ENST00000498077 GON4LQ3T8J9 2241 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 KCNU1A8MYU2 1149 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 TERTO14746 1132 aaKnown RBP1.76□□□□□ -2.13
XRN1-214ENST00000498077 ENSAO43768 121 aaKnown RBP1.76□□□□□ -2.13
XRN1-214ENST00000498077 HNRNPCL1O60812 293 aaKnown RBP1.76□□□□□ -2.13
XRN1-214ENST00000498077 GPR37L1O60883 481 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 AVPP01185 164 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 SPATA31C1P0DKV0 1188 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 SOX11P35716 441 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 EIF4G2P78344 907 aaKnown RBP eCLIP1.76□□□□□ -2.13
XRN1-214ENST00000498077 EIF2B5Q13144 721 aaKnown RBP1.76□□□□□ -2.13
XRN1-214ENST00000498077 ADNP2Q6IQ32 1131 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 LRRC31Q6UY01 552 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 RUFY4Q6ZNE9 571 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 BARGINQ6ZT62 677 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 NAT16Q8N8M0 369 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 RAB9BQ9NP90 201 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 ZDHHC18Q9NUE0 388 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 ANKIB1Q9P2G1 1089 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 TMEM94Q12767 1356 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 RHPN2P1A8MT19 583 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 MUSKO15146 869 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 ADH1CP00326 375 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 HARSP12081 509 aaKnown RBP1.76□□□□□ -2.13
XRN1-214ENST00000498077 PDE6BP35913 854 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 CEBPAP49715 358 aaPredicted RBP1.76□□□□□ -2.13
XRN1-214ENST00000498077 RAB33AQ14088 237 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 LCA5Q86VQ0 697 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 ARHGEF25Q86VW2 580 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 ZSCAN1Q8NBB4 408 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 IL27Q8NEV9 243 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 MPHOSPH6Q99547 160 aaKnown RBP1.76□□□□□ -2.13
XRN1-214ENST00000498077 TUBGCP2Q9BSJ2 902 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 LACRTQ9GZZ8 138 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 WDR35Q9P2L0 1181 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 ZNF281Q9Y2X9 895 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 PTPN13Q12923 2485 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 GPR25O00155 361 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 PPFIA2O75334 1257 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 PECAM1P16284 738 aaPredicted RBP1.76□□□□□ -2.13
XRN1-214ENST00000498077 ZNF124Q15973 351 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 PCSK7Q16549 785 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 TTMPQ5BVD1 217 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 KRTAP5-3Q6L8H2 238 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 PDXDC2PQ6P474 469 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 SEPT12Q8IYM1 358 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 KCNV2Q8TDN2 545 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 OPTNQ96CV9 577 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 EXOC2Q96KP1 924 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 DNAJC2Q99543 621 aaKnown RBP1.76□□□□□ -2.13
XRN1-214ENST00000498077 RAD18Q9NS91 495 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 TPX2Q9ULW0 747 aaKnown RBP1.76□□□□□ -2.13
XRN1-214ENST00000498077 VPS4AQ9UN37 437 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 CD2APQ9Y5K6 639 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 MAST1Q9Y2H9 1570 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 ZMYM3Q14202 1370 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 ABCA6Q8N139 1617 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 GAS2O43903 313 aaKnown RBP1.76□□□□□ -2.13
XRN1-214ENST00000498077 SKIP12755 728 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 KDELR1P24390 212 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 TAF3Q5VWG9 929 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 FIGNL1Q6PIW4 674 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms