RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 SERPINA10Q9UK55 444 aa13.83□□□□□ -0.2
ERCC8-208ENST00000497892 AKAP11Q9UKA4 1901 aa13.83□□□□□ -0.2
ERCC8-208ENST00000497892 MAST2Q6P0Q8 1798 aa13.82□□□□□ -0.2
ERCC8-208ENST00000497892 ARID4AP29374 1257 aaPredicted RBP13.82□□□□□ -0.2
ERCC8-208ENST00000497892 DLGAP5Q15398 846 aa13.82□□□□□ -0.2
ERCC8-208ENST00000497892 GORABQ5T7V8 394 aa13.82□□□□□ -0.2
ERCC8-208ENST00000497892 KRT26Q7Z3Y9 468 aa13.82□□□□□ -0.2
ERCC8-208ENST00000497892 RHPN1Q8TCX5 695 aa13.82□□□□□ -0.2
ERCC8-208ENST00000497892 EAF2Q96CJ1 260 aaPredicted RBP13.82□□□□□ -0.2
ERCC8-208ENST00000497892 KIF1BPQ96EK5 621 aa13.82□□□□□ -0.2
ERCC8-208ENST00000497892 DBNDD2Q9BQY9 259 aa13.82□□□□□ -0.2
ERCC8-208ENST00000497892 DBNLQ9UJU6 430 aaKnown RBP13.82□□□□□ -0.2
ERCC8-208ENST00000497892 MAST3O60307 1309 aa13.82□□□□□ -0.2
ERCC8-208ENST00000497892 ADM5C9JUS6 153 aa13.81□□□□□ -0.2
ERCC8-208ENST00000497892 RAB11FIP3O75154 756 aa13.81□□□□□ -0.2
ERCC8-208ENST00000497892 HDLBPQ00341 1268 aaKnown RBP13.81□□□□□ -0.2
ERCC8-208ENST00000497892 FMR1Q06787 632 aaKnown RBP eCLIP13.81□□□□□ -0.2
ERCC8-208ENST00000497892 CFAP100Q494V2 611 aa13.81□□□□□ -0.2
ERCC8-208ENST00000497892 SULF1Q8IWU6 871 aa13.81□□□□□ -0.2
ERCC8-208ENST00000497892 TLR7Q9NYK1 1049 aaKnown RBP13.81□□□□□ -0.2
ERCC8-208ENST00000497892 PCDHB15Q9Y5E8 787 aa13.81□□□□□ -0.2
ERCC8-208ENST00000497892 PCDHAC2Q9Y5I4 1007 aa13.81□□□□□ -0.2
ERCC8-208ENST00000497892 TMEM88BA6NKF7 163 aa13.8□□□□□ -0.2
ERCC8-208ENST00000497892 UQCRFS1P1P0C7P4 283 aa13.8□□□□□ -0.2
ERCC8-208ENST00000497892 CRKP46108 304 aa13.8□□□□□ -0.2
ERCC8-208ENST00000497892 HTRA3P83110 453 aa13.8□□□□□ -0.2
ERCC8-208ENST00000497892 USP48Q86UV5 1035 aa13.8□□□□□ -0.2
ERCC8-208ENST00000497892 ZGPATQ8N5A5 531 aaKnown RBP13.8□□□□□ -0.2
ERCC8-208ENST00000497892 SPATA5Q8NB90 893 aa13.8□□□□□ -0.2
ERCC8-208ENST00000497892 ZNF512BQ96KM6 892 aaPredicted RBP13.8□□□□□ -0.2
ERCC8-208ENST00000497892 IL1RAPL2Q9NP60 686 aa13.8□□□□□ -0.2
ERCC8-208ENST00000497892 HMG20BQ9P0W2 317 aa13.8□□□□□ -0.2
ERCC8-208ENST00000497892 SUPT16HQ9Y5B9 1047 aaKnown RBP13.8□□□□□ -0.2
ERCC8-208ENST00000497892 APBB1O00213 710 aa13.79□□□□□ -0.2
ERCC8-208ENST00000497892 PRDX5P30044 214 aa13.79□□□□□ -0.2
ERCC8-208ENST00000497892 MCAMP43121 646 aa13.79□□□□□ -0.2
ERCC8-208ENST00000497892 RBM5P52756 815 aaKnown RBP eCLIP13.79□□□□□ -0.2
ERCC8-208ENST00000497892 AAMPQ13685 434 aa13.79□□□□□ -0.2
ERCC8-208ENST00000497892 CCDC158Q5M9N0 1113 aa13.79□□□□□ -0.2
ERCC8-208ENST00000497892 PI16Q6UXB8 463 aa13.79□□□□□ -0.2
ERCC8-208ENST00000497892 AACSQ86V21 672 aa13.79□□□□□ -0.2
ERCC8-208ENST00000497892 APOBEC3FQ8IUX4 373 aaKnown RBP13.79□□□□□ -0.2
ERCC8-208ENST00000497892 CLASRPQ8N2M8 674 aaKnown RBP13.79□□□□□ -0.2
ERCC8-208ENST00000497892 TEKT1Q969V4 418 aa13.79□□□□□ -0.2
ERCC8-208ENST00000497892 PRMT6Q96LA8 375 aaPredicted RBP13.79□□□□□ -0.2
ERCC8-208ENST00000497892 MRIQ9BWK5 157 aa13.79□□□□□ -0.2
ERCC8-208ENST00000497892 MYH2Q9UKX2 1941 aa13.79□□□□□ -0.2
ERCC8-208ENST00000497892 AOX1Q06278 1338 aa13.79□□□□□ -0.2
ERCC8-208ENST00000497892 MYO1BO43795 1136 aa13.78□□□□□ -0.2
ERCC8-208ENST00000497892 CELF2O95319 508 aaKnown RBP13.78□□□□□ -0.2
ERCC8-208ENST00000497892 LDHBP07195 334 aaKnown RBP13.78□□□□□ -0.2
ERCC8-208ENST00000497892 TTC39AQ5SRH9 613 aa13.78□□□□□ -0.2
ERCC8-208ENST00000497892 CST9Q5W186 159 aa13.78□□□□□ -0.2
ERCC8-208ENST00000497892 DLK2Q6UY11 383 aa13.78□□□□□ -0.2
ERCC8-208ENST00000497892 CDCA5Q96FF9 252 aa13.78□□□□□ -0.2
ERCC8-208ENST00000497892 ZDHHC15Q96MV8 337 aa13.78□□□□□ -0.2
ERCC8-208ENST00000497892 CCDC8Q9H0W5 538 aaPredicted RBP13.78□□□□□ -0.2
ERCC8-208ENST00000497892 DCTPP1Q9H773 170 aa13.78□□□□□ -0.2
ERCC8-208ENST00000497892 DOCK2Q92608 1830 aa13.78□□□□□ -0.2
ERCC8-208ENST00000497892 DIXDC1Q155Q3 683 aa13.77□□□□□ -0.21
ERCC8-208ENST00000497892 HHIPL2Q6UWX4 724 aa13.77□□□□□ -0.21
ERCC8-208ENST00000497892 DNAJC5GQ8N7S2 189 aa13.77□□□□□ -0.21
ERCC8-208ENST00000497892 PAPPA2Q9BXP8 1791 aa13.77□□□□□ -0.21
ERCC8-208ENST00000497892 LRRCC1Q9C099 1032 aa13.77□□□□□ -0.21
ERCC8-208ENST00000497892 ZSWIM6Q9HCJ5 1215 aa13.77□□□□□ -0.21
ERCC8-208ENST00000497892 MYO5AQ9Y4I1 1855 aaKnown RBP13.77□□□□□ -0.21
ERCC8-208ENST00000497892 CLRN2A0PK11 232 aa13.76□□□□□ -0.21
ERCC8-208ENST00000497892 SPTY2D1Q68D10 685 aaPredicted RBP13.76□□□□□ -0.21
ERCC8-208ENST00000497892 SPNS2Q8IVW8 549 aa13.76□□□□□ -0.21
ERCC8-208ENST00000497892 KRTAP3-3Q9BYR6 98 aa13.76□□□□□ -0.21
ERCC8-208ENST00000497892 KRTAP3-2Q9BYR7 98 aa13.76□□□□□ -0.21
ERCC8-208ENST00000497892 ZNF408Q9H9D4 720 aa13.76□□□□□ -0.21
ERCC8-208ENST00000497892 ABCF2Q9UG63 623 aa13.76□□□□□ -0.21
ERCC8-208ENST00000497892 SCAF8Q9UPN6 1271 aaKnown RBP13.76□□□□□ -0.21
ERCC8-208ENST00000497892 THSD7BQ9C0I4 1608 aa13.75□□□□□ -0.21
ERCC8-208ENST00000497892 CNTNAP1P78357 1384 aa13.75□□□□□ -0.21
ERCC8-208ENST00000497892 GAKO14976 1311 aa13.75□□□□□ -0.21
ERCC8-208ENST00000497892 RASSF10A6NK89 507 aa13.75□□□□□ -0.21
ERCC8-208ENST00000497892 IFIT2P09913 472 aaKnown RBP13.75□□□□□ -0.21
ERCC8-208ENST00000497892 APOBEC3HQ6NTF7 200 aaKnown RBP13.75□□□□□ -0.21
ERCC8-208ENST00000497892 DZIP1Q86YF9 867 aaKnown RBP13.75□□□□□ -0.21
ERCC8-208ENST00000497892 EXOC6Q8TAG9 804 aa13.75□□□□□ -0.21
ERCC8-208ENST00000497892 KLRG1Q96E93 195 aa13.75□□□□□ -0.21
ERCC8-208ENST00000497892 TDRD3Q9H7E2 651 aaKnown RBP13.75□□□□□ -0.21
ERCC8-208ENST00000497892 VEZTQ9HBM0 779 aa13.75□□□□□ -0.21
ERCC8-208ENST00000497892 SNRKQ9NRH2 765 aa13.75□□□□□ -0.21
ERCC8-208ENST00000497892 ZNF70Q9UC06 446 aaPredicted RBP13.75□□□□□ -0.21
ERCC8-208ENST00000497892 ABT1Q9ULW3 272 aaKnown RBP13.75□□□□□ -0.21
ERCC8-208ENST00000497892 DAGLAQ9Y4D2 1042 aa13.75□□□□□ -0.21
ERCC8-208ENST00000497892 PPP2R3BQ9Y5P8 575 aa13.75□□□□□ -0.21
ERCC8-208ENST00000497892 TLL2Q9Y6L7 1015 aa13.75□□□□□ -0.21
ERCC8-208ENST00000497892 MECOMQ03112 1051 aa13.74□□□□□ -0.21
ERCC8-208ENST00000497892 HDAC1Q13547 482 aaPredicted RBP13.74□□□□□ -0.21
ERCC8-208ENST00000497892 TNFAIP1Q13829 316 aa13.74□□□□□ -0.21
ERCC8-208ENST00000497892 TBC1D9Q6ZT07 1266 aa13.74□□□□□ -0.21
ERCC8-208ENST00000497892 ERICH6Q7L0X2 663 aa13.74□□□□□ -0.21
ERCC8-208ENST00000497892 SAPCD2Q86UD0 394 aa13.74□□□□□ -0.21
ERCC8-208ENST00000497892 ZNF384Q8TF68 577 aa13.74□□□□□ -0.21
ERCC8-208ENST00000497892 DEFB129Q9H1M3 183 aa13.74□□□□□ -0.21
ERCC8-208ENST00000497892 SSC5DA1L4H1 1573 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms