RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 CREB3L3Q68CJ9 461 aa29.02■■■□□ 2.24
TNFRSF4-203ENST00000497869 APOBEC3HQ6NTF7 200 aaKnown RBP29.02■■■□□ 2.24
TNFRSF4-203ENST00000497869 PATL2C9JE40 543 aaKnown RBP29.01■■■□□ 2.23
TNFRSF4-203ENST00000497869 SLC27A2O14975 620 aa29.01■■■□□ 2.23
TNFRSF4-203ENST00000497869 COL9A3Q14050 684 aaPredicted RBP29.01■■■□□ 2.23
TNFRSF4-203ENST00000497869 HHIPL2Q6UWX4 724 aa29.01■■■□□ 2.23
TNFRSF4-203ENST00000497869 IFNL3Q8IZI9 196 aa29■■■□□ 2.23
TNFRSF4-203ENST00000497869 U3KPZ7 1027 aaPredicted RBP29■■■□□ 2.23
TNFRSF4-203ENST00000497869 MYH2Q9UKX2 1941 aa29■■■□□ 2.23
TNFRSF4-203ENST00000497869 CYP21A2P08686 494 aa29■■■□□ 2.23
TNFRSF4-203ENST00000497869 MRIQ9BWK5 157 aa29■■■□□ 2.23
TNFRSF4-203ENST00000497869 SNX14Q9Y5W7 946 aa29■■■□□ 2.23
TNFRSF4-203ENST00000497869 SBF1O95248 1867 aa29■■■□□ 2.23
TNFRSF4-203ENST00000497869 MYO3BQ8WXR4 1341 aa28.99■■■□□ 2.23
TNFRSF4-203ENST00000497869 TEKT1Q969V4 418 aa28.99■■■□□ 2.23
TNFRSF4-203ENST00000497869 RNF181Q9P0P0 153 aa28.99■■■□□ 2.23
TNFRSF4-203ENST00000497869 SMIM22K7EJ46 135 aa28.98■■■□□ 2.23
TNFRSF4-203ENST00000497869 APPP05067 770 aa28.98■■■□□ 2.23
TNFRSF4-203ENST00000497869 AGBL3Q8NEM8 1001 aa28.98■■■□□ 2.23
TNFRSF4-203ENST00000497869 IL17RAQ96F46 866 aa28.98■■■□□ 2.23
TNFRSF4-203ENST00000497869 ZDHHC15Q96MV8 337 aa28.98■■■□□ 2.23
TNFRSF4-203ENST00000497869 GNAT2P19087 354 aa28.97■■■□□ 2.23
TNFRSF4-203ENST00000497869 HDLBPQ00341 1268 aaKnown RBP28.97■■■□□ 2.23
TNFRSF4-203ENST00000497869 TNIP1Q15025 636 aa28.97■■■□□ 2.23
TNFRSF4-203ENST00000497869 C9orf131Q5VYM1 1079 aa28.97■■■□□ 2.23
TNFRSF4-203ENST00000497869 SLF2Q8IX21 1173 aa28.97■■■□□ 2.23
TNFRSF4-203ENST00000497869 MKRN1Q9UHC7 482 aaKnown RBP28.97■■■□□ 2.23
TNFRSF4-203ENST00000497869 SERPINA10Q9UK55 444 aa28.97■■■□□ 2.23
TNFRSF4-203ENST00000497869 EIF6P56537 245 aaKnown RBP28.97■■■□□ 2.23
TNFRSF4-203ENST00000497869 EVX2Q03828 476 aa28.97■■■□□ 2.23
TNFRSF4-203ENST00000497869 ALX1Q15699 326 aa28.97■■■□□ 2.23
TNFRSF4-203ENST00000497869 NBPF3Q9H094 633 aa28.97■■■□□ 2.23
TNFRSF4-203ENST00000497869 BAG3O95817 575 aa28.96■■■□□ 2.23
TNFRSF4-203ENST00000497869 ADCK5Q3MIX3 580 aa28.96■■■□□ 2.23
TNFRSF4-203ENST00000497869 GJA3Q9Y6H8 435 aa28.96■■■□□ 2.23
TNFRSF4-203ENST00000497869 GMPSP49915 693 aaPredicted RBP28.95■■■□□ 2.23
TNFRSF4-203ENST00000497869 CFAP100Q494V2 611 aa28.95■■■□□ 2.23
TNFRSF4-203ENST00000497869 CDC42EP5Q6NZY7 148 aa28.95■■■□□ 2.23
TNFRSF4-203ENST00000497869 DCP1AQ9NPI6 582 aaPredicted RBP28.95■■■□□ 2.23
TNFRSF4-203ENST00000497869 USP17L8P0C7I0 530 aa28.94■■■□□ 2.22
TNFRSF4-203ENST00000497869 MCCP23508 829 aa28.94■■■□□ 2.22
TNFRSF4-203ENST00000497869 HAND2P61296 217 aa28.94■■■□□ 2.22
TNFRSF4-203ENST00000497869 STOX1Q6ZVD7 989 aa28.94■■■□□ 2.22
TNFRSF4-203ENST00000497869 PRMT6Q96LA8 375 aaPredicted RBP28.94■■■□□ 2.22
TNFRSF4-203ENST00000497869 CRNKL1Q9BZJ0 848 aaKnown RBP28.94■■■□□ 2.22
TNFRSF4-203ENST00000497869 TACC3Q9Y6A5 838 aa28.94■■■□□ 2.22
TNFRSF4-203ENST00000497869 TGFBRAP1Q8WUH2 860 aa28.93■■■□□ 2.22
TNFRSF4-203ENST00000497869 ZMYM6O95789 1325 aa28.93■■■□□ 2.22
TNFRSF4-203ENST00000497869 DICER1Q9UPY3 1922 aaKnown RBP28.92■■■□□ 2.22
TNFRSF4-203ENST00000497869 CYP2D7A0A087X1C5 515 aa28.92■■■□□ 2.22
TNFRSF4-203ENST00000497869 WDHD1O75717 1129 aaPredicted RBP28.92■■■□□ 2.22
TNFRSF4-203ENST00000497869 EGFRP00533 1210 aa28.92■■■□□ 2.22
TNFRSF4-203ENST00000497869 RBM5P52756 815 aaKnown RBP eCLIP28.92■■■□□ 2.22
TNFRSF4-203ENST00000497869 ANAPC15P60006 121 aa28.92■■■□□ 2.22
TNFRSF4-203ENST00000497869 USP40Q9NVE5 1235 aa28.92■■■□□ 2.22
TNFRSF4-203ENST00000497869 RPAP1Q9BWH6 1393 aaPredicted RBP28.92■■■□□ 2.22
TNFRSF4-203ENST00000497869 TSGA10IPQ3SY00 556 aa28.91■■■□□ 2.22
TNFRSF4-203ENST00000497869 TEX11Q8IYF3 940 aa28.91■■■□□ 2.22
TNFRSF4-203ENST00000497869 NKX2-3Q8TAU0 364 aa28.91■■■□□ 2.22
TNFRSF4-203ENST00000497869 NOL10Q9BSC4 688 aaKnown RBP28.91■■■□□ 2.22
TNFRSF4-203ENST00000497869 NAPBQ9H115 298 aa28.91■■■□□ 2.22
TNFRSF4-203ENST00000497869 DDX4Q9NQI0 724 aaKnown RBP28.91■■■□□ 2.22
TNFRSF4-203ENST00000497869 GRIN3BO60391 1043 aa28.91■■■□□ 2.22
TNFRSF4-203ENST00000497869 MAPKAPK5Q8IW41 473 aa28.91■■■□□ 2.22
TNFRSF4-203ENST00000497869 CTNNA3Q9UI47 895 aa28.91■■■□□ 2.22
TNFRSF4-203ENST00000497869 CYP2D6P10635 497 aa28.9■■■□□ 2.22
TNFRSF4-203ENST00000497869 RPS12P25398 132 aaKnown RBP28.9■■■□□ 2.22
TNFRSF4-203ENST00000497869 TDO2P48775 406 aa28.9■■■□□ 2.22
TNFRSF4-203ENST00000497869 CACNB3P54284 484 aa28.9■■■□□ 2.22
TNFRSF4-203ENST00000497869 ZNF280AP59817 542 aaPredicted RBP28.9■■■□□ 2.22
TNFRSF4-203ENST00000497869 NFIAQ12857 509 aa28.9■■■□□ 2.22
TNFRSF4-203ENST00000497869 CTR9Q6PD62 1173 aa28.9■■■□□ 2.22
TNFRSF4-203ENST00000497869 TBC1D10CQ8IV04 446 aa28.9■■■□□ 2.22
TNFRSF4-203ENST00000497869 ZBED3Q96IU2 234 aaPredicted RBP28.9■■■□□ 2.22
TNFRSF4-203ENST00000497869 ATP8A2Q9NTI2 1148 aa28.9■■■□□ 2.22
TNFRSF4-203ENST00000497869 SPDYE2BA6NHP3 402 aa28.89■■■□□ 2.22
TNFRSF4-203ENST00000497869 SPDYE6P0CI01 402 aa28.89■■■□□ 2.22
TNFRSF4-203ENST00000497869 CPA1P15085 419 aa28.89■■■□□ 2.22
TNFRSF4-203ENST00000497869 GIMAP6Q6P9H5 292 aa28.89■■■□□ 2.22
TNFRSF4-203ENST00000497869 INCENPQ9NQS7 918 aa28.89■■■□□ 2.22
TNFRSF4-203ENST00000497869 DDNO94850 711 aaPredicted RBP28.89■■■□□ 2.21
TNFRSF4-203ENST00000497869 OGFOD1Q8N543 542 aa28.89■■■□□ 2.21
TNFRSF4-203ENST00000497869 DPF2Q92785 391 aa28.89■■■□□ 2.21
TNFRSF4-203ENST00000497869 NACAP1Q9BZK3 213 aa28.89■■■□□ 2.21
TNFRSF4-203ENST00000497869 TDRD3Q9H7E2 651 aaKnown RBP28.89■■■□□ 2.21
TNFRSF4-203ENST00000497869 FLT1P17948 1338 aa28.88■■■□□ 2.21
TNFRSF4-203ENST00000497869 USP17L12C9JPN9 530 aa28.88■■■□□ 2.21
TNFRSF4-203ENST00000497869 USP17L21D6R901 530 aa28.88■■■□□ 2.21
TNFRSF4-203ENST00000497869 PLCG2P16885 1265 aa28.88■■■□□ 2.21
TNFRSF4-203ENST00000497869 USP5P45974 858 aa28.88■■■□□ 2.21
TNFRSF4-203ENST00000497869 RNF20Q5VTR2 975 aa28.88■■■□□ 2.21
TNFRSF4-203ENST00000497869 MICALL2Q8IY33 904 aa28.88■■■□□ 2.21
TNFRSF4-203ENST00000497869 GPC2Q8N158 579 aa28.88■■■□□ 2.21
TNFRSF4-203ENST00000497869 CTDSPL2Q05D32 466 aa28.87■■■□□ 2.21
TNFRSF4-203ENST00000497869 IMMTQ16891 758 aaKnown RBP28.87■■■□□ 2.21
TNFRSF4-203ENST00000497869 SLC4A8Q2Y0W8 1093 aa28.87■■■□□ 2.21
TNFRSF4-203ENST00000497869 CERS3Q8IU89 383 aa28.87■■■□□ 2.21
TNFRSF4-203ENST00000497869 UPF3BQ9BZI7 483 aaKnown RBP28.87■■■□□ 2.21
TNFRSF4-203ENST00000497869 CNOT7Q9UIV1 285 aaKnown RBP28.87■■■□□ 2.21
TNFRSF4-203ENST00000497869 HDAC9Q9UKV0 1011 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms