RNA–Protein interactions for RNA: ENST00000497393.1

GTF2E1-205, Transcript of general transcription factor IIE subunit 1, humanhuman

TSL 1 (best)

Gene GTF2E1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2E1-205ENST00000497393 KCNB2Q92953 911 aa6.38□□□□□ -1.39
GTF2E1-205ENST00000497393 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.38□□□□□ -1.39
GTF2E1-205ENST00000497393 NT5C1AQ9BXI3 368 aa6.38□□□□□ -1.39
GTF2E1-205ENST00000497393 CYP8B1Q9UNU6 501 aa6.38□□□□□ -1.39
GTF2E1-205ENST00000497393 EFR3BQ9Y2G0 817 aa6.38□□□□□ -1.39
GTF2E1-205ENST00000497393 FAM221AA4D161 298 aa6.37□□□□□ -1.39
GTF2E1-205ENST00000497393 DEAF1O75398 565 aaPredicted RBP6.37□□□□□ -1.39
GTF2E1-205ENST00000497393 SELPP16109 830 aa6.37□□□□□ -1.39
GTF2E1-205ENST00000497393 ATP2B1P20020 1258 aa6.37□□□□□ -1.39
GTF2E1-205ENST00000497393 MAOBP27338 520 aa6.37□□□□□ -1.39
GTF2E1-205ENST00000497393 GTF2F1P35269 517 aaKnown RBP eCLIP6.37□□□□□ -1.39
GTF2E1-205ENST00000497393 CDK8P49336 464 aa6.37□□□□□ -1.39
GTF2E1-205ENST00000497393 LRRC14Q15048 493 aa6.37□□□□□ -1.39
GTF2E1-205ENST00000497393 FOXD4L6Q3SYB3 417 aaPredicted RBP6.37□□□□□ -1.39
GTF2E1-205ENST00000497393 SEZ6Q53EL9 994 aa6.37□□□□□ -1.39
GTF2E1-205ENST00000497393 FOXD4L3Q6VB84 417 aaPredicted RBP6.37□□□□□ -1.39
GTF2E1-205ENST00000497393 ILDR2Q71H61 639 aa6.37□□□□□ -1.39
GTF2E1-205ENST00000497393 DDX54Q8TDD1 881 aaKnown RBP6.37□□□□□ -1.39
GTF2E1-205ENST00000497393 GATAD2BQ8WXI9 593 aa6.37□□□□□ -1.39
GTF2E1-205ENST00000497393 WNT8BQ93098 351 aa6.37□□□□□ -1.39
GTF2E1-205ENST00000497393 USP26Q9BXU7 913 aa6.37□□□□□ -1.39
GTF2E1-205ENST00000497393 CCDC86Q9H6F5 360 aaKnown RBP6.37□□□□□ -1.39
GTF2E1-205ENST00000497393 LRRC4BQ9NT99 713 aa6.37□□□□□ -1.39
GTF2E1-205ENST00000497393 KCNK4Q9NYG8 393 aa6.37□□□□□ -1.39
GTF2E1-205ENST00000497393 ARL4DP49703 201 aa6.36□□□□□ -1.39
GTF2E1-205ENST00000497393 POU4F3Q15319 338 aa6.36□□□□□ -1.39
GTF2E1-205ENST00000497393 VPS37DQ86XT2 251 aa6.36□□□□□ -1.39
GTF2E1-205ENST00000497393 SVOPQ8N4V2 548 aa6.36□□□□□ -1.39
GTF2E1-205ENST00000497393 GPBAR1Q8TDU6 330 aa6.36□□□□□ -1.39
GTF2E1-205ENST00000497393 TRIM11Q96F44 468 aa6.36□□□□□ -1.39
GTF2E1-205ENST00000497393 CORO1BQ9BR76 489 aa6.36□□□□□ -1.39
GTF2E1-205ENST00000497393 EMILIN2Q9BXX0 1053 aa6.36□□□□□ -1.39
GTF2E1-205ENST00000497393 RRAGCQ9HB90 399 aa6.36□□□□□ -1.39
GTF2E1-205ENST00000497393 OSGEPQ9NPF4 335 aa6.36□□□□□ -1.39
GTF2E1-205ENST00000497393 LOC100289279A0A1B0GTE1 492 aa6.35□□□□□ -1.39
GTF2E1-205ENST00000497393 CILPO75339 1184 aa6.35□□□□□ -1.39
GTF2E1-205ENST00000497393 TRIM37O94972 964 aa6.35□□□□□ -1.39
GTF2E1-205ENST00000497393 SOX9P48436 509 aa6.35□□□□□ -1.39
GTF2E1-205ENST00000497393 SNRPNP63162 240 aaKnown RBP6.35□□□□□ -1.39
GTF2E1-205ENST00000497393 PDE3AQ14432 1141 aa6.35□□□□□ -1.39
GTF2E1-205ENST00000497393 CCDC81Q6ZN84 652 aa6.35□□□□□ -1.39
GTF2E1-205ENST00000497393 REC114Q7Z4M0 266 aa6.35□□□□□ -1.39
GTF2E1-205ENST00000497393 CCDC84Q86UT8 332 aaPredicted RBP6.35□□□□□ -1.39
GTF2E1-205ENST00000497393 NEDD1Q8NHV4 660 aa6.35□□□□□ -1.39
GTF2E1-205ENST00000497393 UBASH3BQ8TF42 649 aa6.35□□□□□ -1.39
GTF2E1-205ENST00000497393 NKD1Q969G9 470 aa6.35□□□□□ -1.39
GTF2E1-205ENST00000497393 ACSBG1Q96GR2 724 aa6.35□□□□□ -1.39
GTF2E1-205ENST00000497393 SEC16BQ96JE7 1060 aa6.35□□□□□ -1.39
GTF2E1-205ENST00000497393 LRRC3Q9BY71 257 aa6.35□□□□□ -1.39
GTF2E1-205ENST00000497393 CACNA2D2Q9NY47 1150 aa6.35□□□□□ -1.39
GTF2E1-205ENST00000497393 PPT2Q9UMR5 302 aa6.35□□□□□ -1.39
GTF2E1-205ENST00000497393 DLGAP3O95886 979 aa6.34□□□□□ -1.39
GTF2E1-205ENST00000497393 CYP11A1P05108 521 aa6.34□□□□□ -1.39
GTF2E1-205ENST00000497393 MPP2Q14168 576 aa6.34□□□□□ -1.39
GTF2E1-205ENST00000497393 SUZ12Q15022 739 aaKnown RBP6.34□□□□□ -1.39
GTF2E1-205ENST00000497393 TRAPPC3LQ5T215 181 aa6.34□□□□□ -1.39
GTF2E1-205ENST00000497393 TREML4Q6UXN2 200 aa6.34□□□□□ -1.39
GTF2E1-205ENST00000497393 SLITRK4Q8IW52 837 aa6.34□□□□□ -1.39
GTF2E1-205ENST00000497393 KLHL23Q8NBE8 558 aa6.34□□□□□ -1.39
GTF2E1-205ENST00000497393 WDR89Q96FK6 387 aaPredicted RBP6.34□□□□□ -1.39
GTF2E1-205ENST00000497393 BRMS1Q9HCU9 246 aa6.34□□□□□ -1.39
GTF2E1-205ENST00000497393 MRVI1Q9Y6F6 885 aa6.34□□□□□ -1.39
GTF2E1-205ENST00000497393 FAM229AH3BQW9 127 aa6.33□□□□□ -1.4
GTF2E1-205ENST00000497393 ZNF862O60290 1169 aa6.33□□□□□ -1.4
GTF2E1-205ENST00000497393 WISP1O95388 367 aa6.33□□□□□ -1.4
GTF2E1-205ENST00000497393 BPNT1O95861 308 aa6.33□□□□□ -1.4
GTF2E1-205ENST00000497393 SSBP05455 408 aaKnown RBP eCLIP6.33□□□□□ -1.4
GTF2E1-205ENST00000497393 LIG1P18858 919 aa6.33□□□□□ -1.4
GTF2E1-205ENST00000497393 CD68P34810 354 aaPredicted RBP6.33□□□□□ -1.4
GTF2E1-205ENST00000497393 CWF19L2Q2TBE0 894 aaKnown RBP6.33□□□□□ -1.4
GTF2E1-205ENST00000497393 WIPI1Q5MNZ9 446 aaPredicted RBP6.33□□□□□ -1.4
GTF2E1-205ENST00000497393 SPATA32Q96LK8 384 aa6.33□□□□□ -1.4
GTF2E1-205ENST00000497393 ZNF408Q9H9D4 720 aa6.33□□□□□ -1.4
GTF2E1-205ENST00000497393 PCDHA4Q9UN74 947 aa6.33□□□□□ -1.4
GTF2E1-205ENST00000497393 POLR3KQ9Y2Y1 108 aaPredicted RBP6.33□□□□□ -1.4
GTF2E1-205ENST00000497393 A0A0A0MRY4 1105 aa6.32□□□□□ -1.4
GTF2E1-205ENST00000497393 GRIN3BO60391 1043 aa6.32□□□□□ -1.4
GTF2E1-205ENST00000497393 ARHGEF15O94989 841 aa6.32□□□□□ -1.4
GTF2E1-205ENST00000497393 MCM4P33991 863 aa6.32□□□□□ -1.4
GTF2E1-205ENST00000497393 RPL6Q02878 288 aaKnown RBP6.32□□□□□ -1.4
GTF2E1-205ENST00000497393 INPP5AQ14642 412 aa6.32□□□□□ -1.4
GTF2E1-205ENST00000497393 LRFN4Q6PJG9 635 aa6.32□□□□□ -1.4
GTF2E1-205ENST00000497393 MAP4K3Q8IVH8 894 aa6.32□□□□□ -1.4
GTF2E1-205ENST00000497393 FMR1NBQ8N0W7 255 aaPredicted RBP6.32□□□□□ -1.4
GTF2E1-205ENST00000497393 ARMC5Q96C12 935 aa6.32□□□□□ -1.4
GTF2E1-205ENST00000497393 PLPPR2Q96GM1 343 aa6.32□□□□□ -1.4
GTF2E1-205ENST00000497393 KRT82Q9NSB4 513 aa6.32□□□□□ -1.4
GTF2E1-205ENST00000497393 EIF4G1Q04637 1599 aaKnown RBP6.31□□□□□ -1.4
GTF2E1-205ENST00000497393 STK10O94804 968 aaKnown RBP6.31□□□□□ -1.4
GTF2E1-205ENST00000497393 CLCQ05315 142 aa6.31□□□□□ -1.4
GTF2E1-205ENST00000497393 LINC00114Q6XXX2 140 aa6.31□□□□□ -1.4
GTF2E1-205ENST00000497393 GK5Q6ZS86 529 aa6.31□□□□□ -1.4
GTF2E1-205ENST00000497393 DTWD1Q8N5C7 304 aa6.31□□□□□ -1.4
GTF2E1-205ENST00000497393 PMFBP1Q8TBY8 1022 aa6.31□□□□□ -1.4
GTF2E1-205ENST00000497393 ANAPC16Q96DE5 110 aa6.31□□□□□ -1.4
GTF2E1-205ENST00000497393 WDR18Q9BV38 432 aa6.31□□□□□ -1.4
GTF2E1-205ENST00000497393 LNPKQ9C0E8 428 aa6.31□□□□□ -1.4
GTF2E1-205ENST00000497393 ROBO2Q9HCK4 1378 aa6.31□□□□□ -1.4
GTF2E1-205ENST00000497393 DCDC2CA8MYV0 355 aa6.3□□□□□ -1.4
GTF2E1-205ENST00000497393 DLL1O00548 723 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms