RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 FAM8A1Q9UBU6 413 aa6.66□□□□□ -1.34
SMC4-225ENST00000497203 PARP2Q9UGN5 583 aa6.66□□□□□ -1.34
SMC4-225ENST00000497203 SART1O43290 800 aaKnown RBP6.65□□□□□ -1.34
SMC4-225ENST00000497203 DRD2P14416 443 aa6.65□□□□□ -1.34
SMC4-225ENST00000497203 EIF4BP23588 611 aaKnown RBP6.65□□□□□ -1.34
SMC4-225ENST00000497203 PPP2R3AQ06190 1150 aa6.65□□□□□ -1.34
SMC4-225ENST00000497203 PRR23CQ6ZRP0 262 aa6.65□□□□□ -1.34
SMC4-225ENST00000497203 C12orf50Q8NA57 414 aaPredicted RBP6.65□□□□□ -1.34
SMC4-225ENST00000497203 FAM161BQ96MY7 647 aa6.65□□□□□ -1.34
SMC4-225ENST00000497203 NECAB3Q96P71 396 aaPredicted RBP6.65□□□□□ -1.34
SMC4-225ENST00000497203 ZC3H12CQ9C0D7 883 aaKnown RBP6.65□□□□□ -1.34
SMC4-225ENST00000497203 CYP4F12Q9HCS2 524 aa6.65□□□□□ -1.34
SMC4-225ENST00000497203 PPM1HQ9ULR3 514 aa6.65□□□□□ -1.34
SMC4-225ENST00000497203 AK5Q9Y6K8 562 aa6.65□□□□□ -1.34
SMC4-225ENST00000497203 UNCXA6NJT0 531 aa6.64□□□□□ -1.35
SMC4-225ENST00000497203 ENC1O14682 589 aa6.64□□□□□ -1.35
SMC4-225ENST00000497203 PAGE1O75459 146 aa6.64□□□□□ -1.35
SMC4-225ENST00000497203 VAMP1P23763 118 aa6.64□□□□□ -1.35
SMC4-225ENST00000497203 PDE3AQ14432 1141 aa6.64□□□□□ -1.35
SMC4-225ENST00000497203 UVSSAQ2YD98 709 aa6.64□□□□□ -1.35
SMC4-225ENST00000497203 MCTP1Q6DN14 999 aa6.64□□□□□ -1.35
SMC4-225ENST00000497203 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.64□□□□□ -1.35
SMC4-225ENST00000497203 PDZD3Q86UT5 571 aa6.64□□□□□ -1.35
SMC4-225ENST00000497203 SULF2Q8IWU5 870 aa6.64□□□□□ -1.35
SMC4-225ENST00000497203 MYRFLQ96LU7 910 aa6.64□□□□□ -1.35
SMC4-225ENST00000497203 KRTAP4-11Q9BYQ6 195 aa6.64□□□□□ -1.35
SMC4-225ENST00000497203 CCDC86Q9H6F5 360 aaKnown RBP6.64□□□□□ -1.35
SMC4-225ENST00000497203 GSTP1P09211 210 aaKnown RBP6.63□□□□□ -1.35
SMC4-225ENST00000497203 DAB2P98082 770 aa6.63□□□□□ -1.35
SMC4-225ENST00000497203 SOX4Q06945 474 aaPredicted RBP6.63□□□□□ -1.35
SMC4-225ENST00000497203 FZD5Q13467 585 aa6.63□□□□□ -1.35
SMC4-225ENST00000497203 FAM20CQ8IXL6 584 aa6.63□□□□□ -1.35
SMC4-225ENST00000497203 ANKRD24Q8TF21 1146 aa6.63□□□□□ -1.35
SMC4-225ENST00000497203 WDR89Q96FK6 387 aaPredicted RBP6.63□□□□□ -1.35
SMC4-225ENST00000497203 WDR18Q9BV38 432 aa6.63□□□□□ -1.35
SMC4-225ENST00000497203 RAXQ9Y2V3 346 aa6.63□□□□□ -1.35
SMC4-225ENST00000497203 DHX15O43143 795 aaKnown RBP6.62□□□□□ -1.35
SMC4-225ENST00000497203 GAS2O43903 313 aaKnown RBP6.62□□□□□ -1.35
SMC4-225ENST00000497203 AOC2O75106 756 aa6.62□□□□□ -1.35
SMC4-225ENST00000497203 CELA3AP09093 270 aa6.62□□□□□ -1.35
SMC4-225ENST00000497203 ADH5P11766 374 aa6.62□□□□□ -1.35
SMC4-225ENST00000497203 BMP3P12645 472 aa6.62□□□□□ -1.35
SMC4-225ENST00000497203 LIG1P18858 919 aa6.62□□□□□ -1.35
SMC4-225ENST00000497203 NME2P22392 152 aa6.62□□□□□ -1.35
SMC4-225ENST00000497203 ARNTP27540 789 aa6.62□□□□□ -1.35
SMC4-225ENST00000497203 XPCQ01831 940 aaPredicted RBP6.62□□□□□ -1.35
SMC4-225ENST00000497203 PSMD2Q13200 908 aa6.62□□□□□ -1.35
SMC4-225ENST00000497203 SGO2Q562F6 1265 aa6.62□□□□□ -1.35
SMC4-225ENST00000497203 AKAP4Q5JQC9 854 aa6.62□□□□□ -1.35
SMC4-225ENST00000497203 HP1BP3Q5SSJ5 553 aaPredicted RBP6.62□□□□□ -1.35
SMC4-225ENST00000497203 C2CD4AQ8NCU7 369 aaPredicted RBP6.62□□□□□ -1.35
SMC4-225ENST00000497203 CEP44Q9C0F1 390 aa6.62□□□□□ -1.35
SMC4-225ENST00000497203 RAD18Q9NS91 495 aa6.62□□□□□ -1.35
SMC4-225ENST00000497203 TTF2Q9UNY4 1162 aaKnown RBP6.62□□□□□ -1.35
SMC4-225ENST00000497203 ZNF862O60290 1169 aa6.61□□□□□ -1.35
SMC4-225ENST00000497203 BMP6P22004 513 aa6.61□□□□□ -1.35
SMC4-225ENST00000497203 TXKP42681 527 aa6.61□□□□□ -1.35
SMC4-225ENST00000497203 RASIP1Q5U651 963 aa6.61□□□□□ -1.35
SMC4-225ENST00000497203 MPRIPQ6WCQ1 1025 aa6.61□□□□□ -1.35
SMC4-225ENST00000497203 TMC4Q7Z404 712 aa6.61□□□□□ -1.35
SMC4-225ENST00000497203 KCNB2Q92953 911 aa6.61□□□□□ -1.35
SMC4-225ENST00000497203 KIAA1522Q9P206 1035 aaPredicted RBP6.61□□□□□ -1.35
SMC4-225ENST00000497203 STOML1Q9UBI4 398 aa6.61□□□□□ -1.35
SMC4-225ENST00000497203 HMX2A2RU54 273 aa6.6□□□□□ -1.35
SMC4-225ENST00000497203 CTSHP09668 335 aa6.6□□□□□ -1.35
SMC4-225ENST00000497203 ZNF252P-AS1Q0IIN9 211 aa6.6□□□□□ -1.35
SMC4-225ENST00000497203 MEI1Q5TIA1 1274 aa6.6□□□□□ -1.35
SMC4-225ENST00000497203 CDPF1Q6NVV7 123 aa6.6□□□□□ -1.35
SMC4-225ENST00000497203 TRIM42Q8IWZ5 723 aa6.6□□□□□ -1.35
SMC4-225ENST00000497203 GRIN3AQ8TCU5 1115 aa6.6□□□□□ -1.35
SMC4-225ENST00000497203 KRTAP4-5Q9BYR2 181 aa6.6□□□□□ -1.35
SMC4-225ENST00000497203 KCNF1Q9H3M0 494 aa6.6□□□□□ -1.35
SMC4-225ENST00000497203 C7orf69Q9H7B7 122 aa6.6□□□□□ -1.35
SMC4-225ENST00000497203 CBX8Q9HC52 389 aa6.6□□□□□ -1.35
SMC4-225ENST00000497203 KRT82Q9NSB4 513 aa6.6□□□□□ -1.35
SMC4-225ENST00000497203 PPP1R9AQ9ULJ8 1098 aa6.6□□□□□ -1.35
SMC4-225ENST00000497203 RNF112Q9ULX5 631 aa6.6□□□□□ -1.35
SMC4-225ENST00000497203 AP4E1Q9UPM8 1137 aa6.6□□□□□ -1.35
SMC4-225ENST00000497203 HIF3AQ9Y2N7 669 aa6.6□□□□□ -1.35
SMC4-225ENST00000497203 ACTL7BQ9Y614 415 aa6.6□□□□□ -1.35
SMC4-225ENST00000497203 FSTP19883 344 aa6.59□□□□□ -1.35
SMC4-225ENST00000497203 MAP4P27816 1152 aaKnown RBP6.59□□□□□ -1.35
SMC4-225ENST00000497203 MAP1SQ66K74 1059 aaPredicted RBP6.59□□□□□ -1.35
SMC4-225ENST00000497203 BEND4Q6ZU67 534 aa6.59□□□□□ -1.35
SMC4-225ENST00000497203 DYMQ7RTS9 669 aa6.59□□□□□ -1.35
SMC4-225ENST00000497203 FBLIM1Q8WUP2 373 aa6.59□□□□□ -1.35
SMC4-225ENST00000497203 FMNL2Q96PY5 1086 aa6.59□□□□□ -1.35
SMC4-225ENST00000497203 MRS2Q9HD23 443 aa6.59□□□□□ -1.35
SMC4-225ENST00000497203 SYNGAP1Q96PV0 1343 aa6.58□□□□□ -1.36
SMC4-225ENST00000497203 TMPRSS2O15393 492 aa6.58□□□□□ -1.36
SMC4-225ENST00000497203 RXRBP28702 533 aa6.58□□□□□ -1.36
SMC4-225ENST00000497203 USP11P51784 963 aa6.58□□□□□ -1.36
SMC4-225ENST00000497203 KIF4BQ2VIQ3 1234 aa6.58□□□□□ -1.36
SMC4-225ENST00000497203 PCNX4Q63HM2 1172 aa6.58□□□□□ -1.36
SMC4-225ENST00000497203 SV2BQ7L1I2 683 aa6.58□□□□□ -1.36
SMC4-225ENST00000497203 CLEC10AQ8IUN9 316 aa6.58□□□□□ -1.36
SMC4-225ENST00000497203 GPBAR1Q8TDU6 330 aa6.58□□□□□ -1.36
SMC4-225ENST00000497203 FAM83CQ9BQN1 747 aa6.58□□□□□ -1.36
SMC4-225ENST00000497203 EMILIN2Q9BXX0 1053 aa6.58□□□□□ -1.36
SMC4-225ENST00000497203 FAM105AQ9NUU6 356 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms