RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 BTDP43251 543 aa16.78■□□□□ 0.28
ATPAF2-208ENST00000496852 DYNLL1P63167 89 aaKnown RBP16.78■□□□□ 0.28
ATPAF2-208ENST00000496852 CFAP100Q494V2 611 aa16.78■□□□□ 0.28
ATPAF2-208ENST00000496852 CCDC129Q6ZRS4 1044 aa16.78■□□□□ 0.28
ATPAF2-208ENST00000496852 LCORLQ8N3X6 602 aa16.78■□□□□ 0.28
ATPAF2-208ENST00000496852 MTMR14Q8NCE2 650 aa16.78■□□□□ 0.28
ATPAF2-208ENST00000496852 AIDAQ96BJ3 306 aa16.78■□□□□ 0.28
ATPAF2-208ENST00000496852 L3MBTL3Q96JM7 780 aaPredicted RBP16.78■□□□□ 0.28
ATPAF2-208ENST00000496852 AATFQ9NY61 560 aaKnown RBP eCLIP16.78■□□□□ 0.28
ATPAF2-208ENST00000496852 PCDHAC2Q9Y5I4 1007 aa16.78■□□□□ 0.28
ATPAF2-208ENST00000496852 CCDC171Q6TFL3 1326 aa16.77■□□□□ 0.28
ATPAF2-208ENST00000496852 APOBEC3HQ6NTF7 200 aaKnown RBP16.77■□□□□ 0.28
ATPAF2-208ENST00000496852 ZBED3Q96IU2 234 aaPredicted RBP16.77■□□□□ 0.28
ATPAF2-208ENST00000496852 STRBPQ96SI9 672 aaKnown RBP16.77■□□□□ 0.28
ATPAF2-208ENST00000496852 ARMT1Q9H993 441 aa16.77■□□□□ 0.28
ATPAF2-208ENST00000496852 BAG3O95817 575 aa16.76■□□□□ 0.27
ATPAF2-208ENST00000496852 RBM5P52756 815 aaKnown RBP eCLIP16.76■□□□□ 0.27
ATPAF2-208ENST00000496852 NOL10Q9BSC4 688 aaKnown RBP16.76■□□□□ 0.27
ATPAF2-208ENST00000496852 MYOZ2Q9NPC6 264 aa16.76■□□□□ 0.27
ATPAF2-208ENST00000496852 SPDYE2BA6NHP3 402 aa16.75■□□□□ 0.27
ATPAF2-208ENST00000496852 SPDYE6P0CI01 402 aa16.75■□□□□ 0.27
ATPAF2-208ENST00000496852 MFAP1P55081 439 aaKnown RBP16.75■□□□□ 0.27
ATPAF2-208ENST00000496852 RHBDL3P58872 404 aa16.75■□□□□ 0.27
ATPAF2-208ENST00000496852 CERS3Q8IU89 383 aa16.75■□□□□ 0.27
ATPAF2-208ENST00000496852 PRMT6Q96LA8 375 aaPredicted RBP16.75■□□□□ 0.27
ATPAF2-208ENST00000496852 BACH2Q9BYV9 841 aa16.75■□□□□ 0.27
ATPAF2-208ENST00000496852 MYH8P13535 1937 aa16.75■□□□□ 0.27
ATPAF2-208ENST00000496852 H7C1D1 291 aa16.75■□□□□ 0.27
ATPAF2-208ENST00000496852 SEC24BO95487 1268 aa16.75■□□□□ 0.27
ATPAF2-208ENST00000496852 EGFRP00533 1210 aa16.75■□□□□ 0.27
ATPAF2-208ENST00000496852 EPS15P42566 896 aa16.75■□□□□ 0.27
ATPAF2-208ENST00000496852 DLGAP5Q15398 846 aa16.75■□□□□ 0.27
ATPAF2-208ENST00000496852 SH3RF3Q8TEJ3 882 aaPredicted RBP16.75■□□□□ 0.27
ATPAF2-208ENST00000496852 FOXP2O15409 715 aa16.74■□□□□ 0.27
ATPAF2-208ENST00000496852 PLCG2P16885 1265 aa16.74■□□□□ 0.27
ATPAF2-208ENST00000496852 VPS53Q5VIR6 699 aa16.74■□□□□ 0.27
ATPAF2-208ENST00000496852 CDC42EP5Q6NZY7 148 aa16.74■□□□□ 0.27
ATPAF2-208ENST00000496852 SAMD7Q7Z3H4 446 aa16.74■□□□□ 0.27
ATPAF2-208ENST00000496852 WNT10BO00744 389 aa16.73■□□□□ 0.27
ATPAF2-208ENST00000496852 GNAT2P19087 354 aa16.73■□□□□ 0.27
ATPAF2-208ENST00000496852 LMOD1P29536 600 aaPredicted RBP16.73■□□□□ 0.27
ATPAF2-208ENST00000496852 LSG1Q9H089 658 aaKnown RBP16.73■□□□□ 0.27
ATPAF2-208ENST00000496852 SIPA1L1O43166 1804 aa16.73■□□□□ 0.27
ATPAF2-208ENST00000496852 PRKAB2O43741 272 aa16.72■□□□□ 0.27
ATPAF2-208ENST00000496852 HSPD1P10809 573 aaKnown RBP16.72■□□□□ 0.27
ATPAF2-208ENST00000496852 PTH1RQ03431 593 aa16.72■□□□□ 0.27
ATPAF2-208ENST00000496852 KIF4BQ2VIQ3 1234 aa16.72■□□□□ 0.27
ATPAF2-208ENST00000496852 TBC1D10BQ4KMP7 808 aaPredicted RBP16.72■□□□□ 0.27
ATPAF2-208ENST00000496852 CRNKL1Q9BZJ0 848 aaKnown RBP16.72■□□□□ 0.27
ATPAF2-208ENST00000496852 TDRD3Q9H7E2 651 aaKnown RBP16.72■□□□□ 0.27
ATPAF2-208ENST00000496852 USP40Q9NVE5 1235 aa16.72■□□□□ 0.27
ATPAF2-208ENST00000496852 SLC4A4Q9Y6R1 1079 aa16.72■□□□□ 0.27
ATPAF2-208ENST00000496852 RPAP1Q9BWH6 1393 aaPredicted RBP16.72■□□□□ 0.27
ATPAF2-208ENST00000496852 GSG1L2A8MUP6 293 aa16.72■□□□□ 0.27
ATPAF2-208ENST00000496852 POTECB2RU33 542 aa16.72■□□□□ 0.27
ATPAF2-208ENST00000496852 REC8O95072 547 aa16.72■□□□□ 0.27
ATPAF2-208ENST00000496852 NBPF9Q3BBW0 867 aa16.72■□□□□ 0.27
ATPAF2-208ENST00000496852 RBM26Q5T8P6 1007 aaKnown RBP16.72■□□□□ 0.27
ATPAF2-208ENST00000496852 TEX11Q8IYF3 940 aa16.72■□□□□ 0.27
ATPAF2-208ENST00000496852 TRPM4Q8TD43 1214 aa16.72■□□□□ 0.27
ATPAF2-208ENST00000496852 SDR42E1Q8WUS8 393 aa16.72■□□□□ 0.27
ATPAF2-208ENST00000496852 DSCC1Q9BVC3 393 aa16.72■□□□□ 0.27
ATPAF2-208ENST00000496852 ANO2Q9NQ90 1003 aa16.72■□□□□ 0.27
ATPAF2-208ENST00000496852 ADARB2Q9NS39 739 aaKnown RBP16.72■□□□□ 0.27
ATPAF2-208ENST00000496852 HACL1Q9UJ83 578 aa16.72■□□□□ 0.27
ATPAF2-208ENST00000496852 PATL2C9JE40 543 aaKnown RBP16.71■□□□□ 0.27
ATPAF2-208ENST00000496852 EIF5BO60841 1220 aaKnown RBP16.71■□□□□ 0.27
ATPAF2-208ENST00000496852 WDHD1O75717 1129 aaPredicted RBP16.71■□□□□ 0.27
ATPAF2-208ENST00000496852 SPDYE2Q495Y8 402 aa16.71■□□□□ 0.27
ATPAF2-208ENST00000496852 KIAA1211Q6ZU35 1233 aa16.71■□□□□ 0.27
ATPAF2-208ENST00000496852 MAP4K1Q92918 833 aa16.71■□□□□ 0.27
ATPAF2-208ENST00000496852 EPB41L4AQ9HCS5 686 aaPredicted RBP16.71■□□□□ 0.27
ATPAF2-208ENST00000496852 HIRAP54198 1017 aaPredicted RBP16.7■□□□□ 0.26
ATPAF2-208ENST00000496852 IDI2Q9BXS1 227 aa16.7■□□□□ 0.26
ATPAF2-208ENST00000496852 ZNF70Q9UC06 446 aaPredicted RBP16.7■□□□□ 0.26
ATPAF2-208ENST00000496852 MKRN1Q9UHC7 482 aaKnown RBP16.7■□□□□ 0.26
ATPAF2-208ENST00000496852 IQCA1LA6NCM1 817 aa16.69■□□□□ 0.26
ATPAF2-208ENST00000496852 EPB41L2O43491 1005 aaKnown RBP16.69■□□□□ 0.26
ATPAF2-208ENST00000496852 MYO1BO43795 1136 aa16.69■□□□□ 0.26
ATPAF2-208ENST00000496852 ZMYM6O95789 1325 aa16.69■□□□□ 0.26
ATPAF2-208ENST00000496852 IFNL3Q8IZI9 196 aa16.69■□□□□ 0.26
ATPAF2-208ENST00000496852 TGFBRAP1Q8WUH2 860 aa16.69■□□□□ 0.26
ATPAF2-208ENST00000496852 DCP1AQ9NPI6 582 aaPredicted RBP16.69■□□□□ 0.26
ATPAF2-208ENST00000496852 ATP8A2Q9NTI2 1148 aa16.69■□□□□ 0.26
ATPAF2-208ENST00000496852 FLT1P17948 1338 aa16.69■□□□□ 0.26
ATPAF2-208ENST00000496852 CLRN2A0PK11 232 aa16.69■□□□□ 0.26
ATPAF2-208ENST00000496852 EPHX2P34913 555 aa16.69■□□□□ 0.26
ATPAF2-208ENST00000496852 NFIAQ12857 509 aa16.69■□□□□ 0.26
ATPAF2-208ENST00000496852 ALX1Q15699 326 aa16.69■□□□□ 0.26
ATPAF2-208ENST00000496852 GIMAP6Q6P9H5 292 aa16.69■□□□□ 0.26
ATPAF2-208ENST00000496852 USP26Q9BXU7 913 aa16.69■□□□□ 0.26
ATPAF2-208ENST00000496852 DDX4Q9NQI0 724 aaKnown RBP16.69■□□□□ 0.26
ATPAF2-208ENST00000496852 ASTN2O75129 1339 aaPredicted RBP16.68■□□□□ 0.26
ATPAF2-208ENST00000496852 NPM3O75607 178 aaKnown RBP16.68■□□□□ 0.26
ATPAF2-208ENST00000496852 FGAP02671 866 aa16.68■□□□□ 0.26
ATPAF2-208ENST00000496852 APPP05067 770 aa16.68■□□□□ 0.26
ATPAF2-208ENST00000496852 USP5P45974 858 aa16.68■□□□□ 0.26
ATPAF2-208ENST00000496852 CACNB3P54284 484 aa16.68■□□□□ 0.26
ATPAF2-208ENST00000496852 FKBP1CQ5VVH2 108 aa16.68■□□□□ 0.26
ATPAF2-208ENST00000496852 USP50Q70EL3 339 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms