RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-210	ENST00000496840	CEP44	Q9C0F1	390 aa		10.94	□□□□□ -0.66
TARDBP-210	ENST00000496840	CCDC86	Q9H6F5	360 aa	Known RBP	10.94	□□□□□ -0.66
TARDBP-210	ENST00000496840	FAM8A1	Q9UBU6	413 aa		10.94	□□□□□ -0.66
TARDBP-210	ENST00000496840	ACTL7B	Q9Y614	415 aa		10.94	□□□□□ -0.66
TARDBP-210	ENST00000496840	FAM95C	A0A1B0GW59	222 aa		10.93	□□□□□ -0.66
TARDBP-210	ENST00000496840	RXRB	P28702	533 aa		10.93	□□□□□ -0.66
TARDBP-210	ENST00000496840	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	10.93	□□□□□ -0.66
TARDBP-210	ENST00000496840	SULF2	Q8IWU5	870 aa		10.93	□□□□□ -0.66
TARDBP-210	ENST00000496840	ZFP64	Q9NPA5	681 aa		10.93	□□□□□ -0.66
TARDBP-210	ENST00000496840	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	10.92	□□□□□ -0.66
TARDBP-210	ENST00000496840	NME2	P22392	152 aa		10.92	□□□□□ -0.66
TARDBP-210	ENST00000496840	ARNT	P27540	789 aa		10.92	□□□□□ -0.66
TARDBP-210	ENST00000496840	GNA15	P30679	374 aa		10.92	□□□□□ -0.66
TARDBP-210	ENST00000496840	FBLIM1	Q8WUP2	373 aa		10.92	□□□□□ -0.66
TARDBP-210	ENST00000496840	EMILIN2	Q9BXX0	1053 aa		10.92	□□□□□ -0.66
TARDBP-210	ENST00000496840	AP4E1	Q9UPM8	1137 aa		10.92	□□□□□ -0.66
TARDBP-210	ENST00000496840	KIF4B	Q2VIQ3	1234 aa		10.91	□□□□□ -0.66
TARDBP-210	ENST00000496840	EAPP	Q56P03	285 aa	Predicted RBP	10.91	□□□□□ -0.66
TARDBP-210	ENST00000496840	PAOX	Q6QHF9	649 aa		10.91	□□□□□ -0.66
TARDBP-210	ENST00000496840	DYM	Q7RTS9	669 aa		10.91	□□□□□ -0.66
TARDBP-210	ENST00000496840	ENC1	O14682	589 aa		10.9	□□□□□ -0.66
TARDBP-210	ENST00000496840	ZNF862	O60290	1169 aa		10.9	□□□□□ -0.66
TARDBP-210	ENST00000496840	SLFN14	P0C7P3	912 aa		10.9	□□□□□ -0.66
TARDBP-210	ENST00000496840	LIG1	P18858	919 aa		10.9	□□□□□ -0.66
TARDBP-210	ENST00000496840	KRTAP1-3	Q8IUG1	177 aa		10.9	□□□□□ -0.66
TARDBP-210	ENST00000496840	NPAS4	Q8IUM7	802 aa		10.9	□□□□□ -0.66
TARDBP-210	ENST00000496840	STK35	Q8TDR2	534 aa		10.9	□□□□□ -0.66
TARDBP-210	ENST00000496840	ZC3H12C	Q9C0D7	883 aa	Known RBP	10.9	□□□□□ -0.66
TARDBP-210	ENST00000496840	ACSS3	Q9H6R3	686 aa		10.9	□□□□□ -0.66
TARDBP-210	ENST00000496840	FAM105A	Q9NUU6	356 aa		10.9	□□□□□ -0.66
TARDBP-210	ENST00000496840	PPP1R9A	Q9ULJ8	1098 aa		10.9	□□□□□ -0.66
TARDBP-210	ENST00000496840	TMPRSS2	O15393	492 aa		10.89	□□□□□ -0.67
TARDBP-210	ENST00000496840	HYAL3	O43820	417 aa	Predicted RBP	10.89	□□□□□ -0.67
TARDBP-210	ENST00000496840	MAP7	Q14244	749 aa		10.89	□□□□□ -0.67
TARDBP-210	ENST00000496840	SHKBP1	Q8TBC3	707 aa		10.89	□□□□□ -0.67
TARDBP-210	ENST00000496840	WDR89	Q96FK6	387 aa	Predicted RBP	10.89	□□□□□ -0.67
TARDBP-210	ENST00000496840	CRIM1	Q9NZV1	1036 aa		10.89	□□□□□ -0.67
TARDBP-210	ENST00000496840	SAMM50	Q9Y512	469 aa		10.89	□□□□□ -0.67
TARDBP-210	ENST00000496840	PCDHGC5	Q9Y5F6	944 aa		10.89	□□□□□ -0.67
TARDBP-210	ENST00000496840	PRR19	A6NJB7	356 aa		10.88	□□□□□ -0.67
TARDBP-210	ENST00000496840	TGFB1	P01137	390 aa		10.88	□□□□□ -0.67
TARDBP-210	ENST00000496840	USP17L7	P0C7H9	530 aa		10.88	□□□□□ -0.67
TARDBP-210	ENST00000496840	ASPA	P45381	313 aa		10.88	□□□□□ -0.67
TARDBP-210	ENST00000496840	ZNF252P-AS1	Q0IIN9	211 aa		10.88	□□□□□ -0.67
TARDBP-210	ENST00000496840	NFKBIB	Q15653	356 aa		10.88	□□□□□ -0.67
TARDBP-210	ENST00000496840	TPTE2	Q6XPS3	522 aa		10.88	□□□□□ -0.67
TARDBP-210	ENST00000496840	GIMAP7	Q8NHV1	300 aa		10.88	□□□□□ -0.67
TARDBP-210	ENST00000496840	KCNB2	Q92953	911 aa		10.88	□□□□□ -0.67
TARDBP-210	ENST00000496840	CACNA2D2	Q9NY47	1150 aa		10.88	□□□□□ -0.67
TARDBP-210	ENST00000496840	CD97	P48960	835 aa		10.87	□□□□□ -0.67
TARDBP-210	ENST00000496840	ID3	Q02535	119 aa		10.87	□□□□□ -0.67
TARDBP-210	ENST00000496840	CPSF6	Q16630	551 aa	Known RBP eCLIP	10.87	□□□□□ -0.67	8e-8	■■■□□ 17.3
TARDBP-210	ENST00000496840	MFSD14A	Q96MC6	490 aa		10.87	□□□□□ -0.67
TARDBP-210	ENST00000496840	SEMA6C	Q9H3T2	930 aa		10.87	□□□□□ -0.67
TARDBP-210	ENST00000496840	COBL	O75128	1261 aa		10.86	□□□□□ -0.67
TARDBP-210	ENST00000496840	RAB6A	P20340	208 aa		10.86	□□□□□ -0.67
TARDBP-210	ENST00000496840	EIF4B	P23588	611 aa	Known RBP	10.86	□□□□□ -0.67
TARDBP-210	ENST00000496840	INTS5	Q6P9B9	1019 aa	Known RBP	10.86	□□□□□ -0.67
TARDBP-210	ENST00000496840	DUSP9	Q99956	384 aa	Known RBP	10.86	□□□□□ -0.67
TARDBP-210	ENST00000496840	ATXN3L	Q9H3M9	355 aa		10.86	□□□□□ -0.67
TARDBP-210	ENST00000496840	PRKAG2	Q9UGJ0	569 aa		10.86	□□□□□ -0.67
TARDBP-210	ENST00000496840	AK5	Q9Y6K8	562 aa		10.86	□□□□□ -0.67
TARDBP-210	ENST00000496840	NFIC	P08651	508 aa		10.85	□□□□□ -0.67
TARDBP-210	ENST00000496840	ERCC3	P19447	782 aa		10.85	□□□□□ -0.67
TARDBP-210	ENST00000496840	BMP6	P22004	513 aa		10.85	□□□□□ -0.67
TARDBP-210	ENST00000496840	SCARA3	Q6AZY7	606 aa		10.85	□□□□□ -0.67
TARDBP-210	ENST00000496840	GZF1	Q9H116	711 aa	Predicted RBP	10.85	□□□□□ -0.67
TARDBP-210	ENST00000496840	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	10.84	□□□□□ -0.67
TARDBP-210	ENST00000496840	WDR64	B1ANS9	1081 aa		10.84	□□□□□ -0.67
TARDBP-210	ENST00000496840	FBXO24	O75426	580 aa		10.84	□□□□□ -0.67
TARDBP-210	ENST00000496840	PAGE1	O75459	146 aa		10.84	□□□□□ -0.67
TARDBP-210	ENST00000496840	F13B	P05160	661 aa		10.84	□□□□□ -0.67
TARDBP-210	ENST00000496840	GRIK1	P39086	918 aa		10.84	□□□□□ -0.67
TARDBP-210	ENST00000496840	CCDC27	Q2M243	656 aa		10.84	□□□□□ -0.67
TARDBP-210	ENST00000496840	MAP1S	Q66K74	1059 aa	Predicted RBP	10.84	□□□□□ -0.67
TARDBP-210	ENST00000496840	ZAR1	Q86SH2	424 aa		10.84	□□□□□ -0.67
TARDBP-210	ENST00000496840	FANCD2OS	Q96PS1	177 aa		10.84	□□□□□ -0.67
TARDBP-210	ENST00000496840	SEZ6L2	Q6UXD5	910 aa		10.83	□□□□□ -0.68
TARDBP-210	ENST00000496840	SV2B	Q7L1I2	683 aa		10.83	□□□□□ -0.68
TARDBP-210	ENST00000496840	GATA6	Q92908	595 aa		10.83	□□□□□ -0.68
TARDBP-210	ENST00000496840	METTL22	Q9BUU2	404 aa	Predicted RBP	10.83	□□□□□ -0.68
TARDBP-210	ENST00000496840	CBX8	Q9HC52	389 aa		10.83	□□□□□ -0.68
TARDBP-210	ENST00000496840	ATG3	Q9NT62	314 aa		10.83	□□□□□ -0.68
TARDBP-210	ENST00000496840	TRIM37	O94972	964 aa		10.82	□□□□□ -0.68
TARDBP-210	ENST00000496840	SSTR4	P31391	388 aa		10.82	□□□□□ -0.68
TARDBP-210	ENST00000496840	LRRC14	Q15048	493 aa		10.82	□□□□□ -0.68
TARDBP-210	ENST00000496840	ZC3H12A	Q5D1E8	599 aa	Known RBP	10.82	□□□□□ -0.68
TARDBP-210	ENST00000496840	FBXO33	Q7Z6M2	555 aa		10.82	□□□□□ -0.68
TARDBP-210	ENST00000496840	FBXL6	Q8N531	539 aa		10.82	□□□□□ -0.68
TARDBP-210	ENST00000496840	GPBAR1	Q8TDU6	330 aa		10.82	□□□□□ -0.68
TARDBP-210	ENST00000496840	TBC1D32	Q96NH3	1257 aa		10.82	□□□□□ -0.68
TARDBP-210	ENST00000496840	DISC1	Q9NRI5	854 aa		10.82	□□□□□ -0.68
TARDBP-210	ENST00000496840	PCMTD2	Q9NV79	361 aa		10.82	□□□□□ -0.68
TARDBP-210	ENST00000496840	PIM2	Q9P1W9	311 aa		10.82	□□□□□ -0.68
TARDBP-210	ENST00000496840	TTF2	Q9UNY4	1162 aa	Known RBP	10.82	□□□□□ -0.68
TARDBP-210	ENST00000496840	CELA3A	P09093	270 aa		10.81	□□□□□ -0.68
TARDBP-210	ENST00000496840	ADM	P35318	185 aa		10.81	□□□□□ -0.68
TARDBP-210	ENST00000496840	OSBPL1A	Q9BXW6	950 aa		10.81	□□□□□ -0.68
TARDBP-210	ENST00000496840	PIDD1	Q9HB75	910 aa		10.81	□□□□□ -0.68
TARDBP-210	ENST00000496840	PARP2	Q9UGN5	583 aa		10.81	□□□□□ -0.68

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