RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 ASPAP45381 313 aa7.05□□□□□ -1.28
CD46-218ENST00000496723 OGFOD3Q6PK18 319 aa7.05□□□□□ -1.28
CD46-218ENST00000496723 ZNF765Q7L2R6 523 aa7.05□□□□□ -1.28
CD46-218ENST00000496723 TRIM56Q9BRZ2 755 aaKnown RBP7.05□□□□□ -1.28
CD46-218ENST00000496723 FAM105AQ9NUU6 356 aa7.05□□□□□ -1.28
CD46-218ENST00000496723 ZC3H7BQ9UGR2 993 aaKnown RBP7.05□□□□□ -1.28
CD46-218ENST00000496723 NDUFB5O43674 189 aa7.04□□□□□ -1.28
CD46-218ENST00000496723 CTSBP07858 339 aa7.04□□□□□ -1.28
CD46-218ENST00000496723 ITPKAP23677 461 aa7.04□□□□□ -1.28
CD46-218ENST00000496723 PTPN12Q05209 780 aaKnown RBP7.04□□□□□ -1.28
CD46-218ENST00000496723 AP3B2Q13367 1082 aa7.04□□□□□ -1.28
CD46-218ENST00000496723 COL19A1Q14993 1142 aa7.04□□□□□ -1.28
CD46-218ENST00000496723 SEZ6L2Q6UXD5 910 aa7.04□□□□□ -1.28
CD46-218ENST00000496723 AEBP1Q8IUX7 1158 aa7.04□□□□□ -1.28
CD46-218ENST00000496723 STK11IPQ8N1F8 1099 aa7.04□□□□□ -1.28
CD46-218ENST00000496723 LRRC4CQ9HCJ2 640 aa7.04□□□□□ -1.28
CD46-218ENST00000496723 C1GALT1Q9NS00 363 aa7.04□□□□□ -1.28
CD46-218ENST00000496723 BIN2Q9UBW5 565 aaPredicted RBP7.04□□□□□ -1.28
CD46-218ENST00000496723 AOC2O75106 756 aa7.03□□□□□ -1.28
CD46-218ENST00000496723 CYP27C1Q4G0S4 372 aa7.03□□□□□ -1.28
CD46-218ENST00000496723 ZNF576Q9H609 170 aa7.03□□□□□ -1.28
CD46-218ENST00000496723 AP4E1Q9UPM8 1137 aa7.03□□□□□ -1.28
CD46-218ENST00000496723 SLC5A6Q9Y289 635 aa7.03□□□□□ -1.28
CD46-218ENST00000496723 PDE3BQ13370 1112 aa7.02□□□□□ -1.29
CD46-218ENST00000496723 MISP3Q96FF7 219 aa7.02□□□□□ -1.29
CD46-218ENST00000496723 PATL2C9JE40 543 aaKnown RBP7.01□□□□□ -1.29
CD46-218ENST00000496723 RPS26P11Q5JNZ5 115 aaPredicted RBP7.01□□□□□ -1.29
CD46-218ENST00000496723 BCL7CQ8WUZ0 217 aaPredicted RBP7.01□□□□□ -1.29
CD46-218ENST00000496723 EHD4Q9H223 541 aa7.01□□□□□ -1.29
CD46-218ENST00000496723 DAGLAQ9Y4D2 1042 aa7.01□□□□□ -1.29
CD46-218ENST00000496723 BIN1O00499 593 aa7□□□□□ -1.29
CD46-218ENST00000496723 ECEL1O95672 775 aa7□□□□□ -1.29
CD46-218ENST00000496723 HNRNPUQ00839 825 aaKnown RBP eCLIP7□□□□□ -1.29
CD46-218ENST00000496723 PDE3AQ14432 1141 aa7□□□□□ -1.29
CD46-218ENST00000496723 TMC1Q8TDI8 760 aa7□□□□□ -1.29
CD46-218ENST00000496723 CITED4Q96RK1 184 aa7□□□□□ -1.29
CD46-218ENST00000496723 WDR18Q9BV38 432 aa7□□□□□ -1.29
CD46-218ENST00000496723 DYNC1LI2O43237 492 aaPredicted RBP6.99□□□□□ -1.29
CD46-218ENST00000496723 CPNE3O75131 537 aaKnown RBP6.99□□□□□ -1.29
CD46-218ENST00000496723 C8AP07357 584 aa6.99□□□□□ -1.29
CD46-218ENST00000496723 SLFN14P0C7P3 912 aa6.99□□□□□ -1.29
CD46-218ENST00000496723 JAG1P78504 1218 aa6.99□□□□□ -1.29
CD46-218ENST00000496723 PLCL1Q15111 1095 aa6.98□□□□□ -1.29
CD46-218ENST00000496723 LCE1DQ5T752 114 aa6.98□□□□□ -1.29
CD46-218ENST00000496723 USPL1Q5W0Q7 1092 aa6.98□□□□□ -1.29
CD46-218ENST00000496723 PRPF40BQ6NWY9 871 aaKnown RBP6.98□□□□□ -1.29
CD46-218ENST00000496723 DNAJC25Q9H1X3 360 aa6.98□□□□□ -1.29
CD46-218ENST00000496723 PPP1R9AQ9ULJ8 1098 aa6.98□□□□□ -1.29
CD46-218ENST00000496723 PAPLNO95428 1278 aa6.97□□□□□ -1.29
CD46-218ENST00000496723 FAM129BQ96TA1 746 aa6.97□□□□□ -1.29
CD46-218ENST00000496723 ATXN3LQ9H3M9 355 aa6.97□□□□□ -1.29
CD46-218ENST00000496723 ABCB6Q9NP58 842 aa6.97□□□□□ -1.29
CD46-218ENST00000496723 NPHS2Q9NP85 383 aa6.97□□□□□ -1.29
CD46-218ENST00000496723 CRIM1Q9NZV1 1036 aa6.97□□□□□ -1.29
CD46-218ENST00000496723 DCTN4Q9UJW0 460 aa6.97□□□□□ -1.29
CD46-218ENST00000496723 TRAK1Q9UPV9 953 aa6.97□□□□□ -1.29
CD46-218ENST00000496723 MAPK1P28482 360 aa6.96□□□□□ -1.3
CD46-218ENST00000496723 ZNF792Q3KQV3 632 aa6.96□□□□□ -1.3
CD46-218ENST00000496723 SPRED2Q7Z698 418 aa6.96□□□□□ -1.3
CD46-218ENST00000496723 NETO1Q8TDF5 533 aa6.96□□□□□ -1.3
CD46-218ENST00000496723 RBCK1Q9BYM8 510 aa6.96□□□□□ -1.3
CD46-218ENST00000496723 PIDD1Q9HB75 910 aa6.96□□□□□ -1.3
CD46-218ENST00000496723 MKNK2Q9HBH9 465 aa6.96□□□□□ -1.3
CD46-218ENST00000496723 KRT82Q9NSB4 513 aa6.96□□□□□ -1.3
CD46-218ENST00000496723 TMEM238LA0A1B0GVL6 79 aa6.95□□□□□ -1.3
CD46-218ENST00000496723 GPR182O15218 404 aa6.95□□□□□ -1.3
CD46-218ENST00000496723 TMPRSS2O15393 492 aa6.95□□□□□ -1.3
CD46-218ENST00000496723 ID3Q02535 119 aa6.95□□□□□ -1.3
CD46-218ENST00000496723 ORC1Q13415 861 aa6.95□□□□□ -1.3
CD46-218ENST00000496723 ATG4DQ86TL0 474 aaPredicted RBP6.95□□□□□ -1.3
CD46-218ENST00000496723 CCDC74AQ96AQ1 378 aa6.95□□□□□ -1.3
CD46-218ENST00000496723 NIF3L1Q9GZT8 377 aa6.95□□□□□ -1.3
CD46-218ENST00000496723 LGR6Q9HBX8 967 aa6.95□□□□□ -1.3
CD46-218ENST00000496723 VAV3Q9UKW4 847 aa6.95□□□□□ -1.3
CD46-218ENST00000496723 IGHA2P01877 340 aa6.94□□□□□ -1.3
CD46-218ENST00000496723 FAM87AP0C7U9 286 aa6.94□□□□□ -1.3
CD46-218ENST00000496723 FUT4P22083 530 aa6.94□□□□□ -1.3
CD46-218ENST00000496723 KIF4BQ2VIQ3 1234 aa6.94□□□□□ -1.3
CD46-218ENST00000496723 TMC7Q7Z402 723 aa6.94□□□□□ -1.3
CD46-218ENST00000496723 WFDC3Q8IUB2 231 aa6.94□□□□□ -1.3
CD46-218ENST00000496723 SMYD4Q8IYR2 804 aaPredicted RBP6.94□□□□□ -1.3
CD46-218ENST00000496723 DMRTB1Q96MA1 342 aa6.94□□□□□ -1.3
CD46-218ENST00000496723 FANCD2OSQ96PS1 177 aa6.94□□□□□ -1.3
CD46-218ENST00000496723 CCDC86Q9H6F5 360 aaKnown RBP6.94□□□□□ -1.3
CD46-218ENST00000496723 LIG1P18858 919 aa6.93□□□□□ -1.3
CD46-218ENST00000496723 PRKCQQ04759 706 aa6.93□□□□□ -1.3
CD46-218ENST00000496723 ZNF574Q6ZN55 896 aaPredicted RBP6.93□□□□□ -1.3
CD46-218ENST00000496723 HOMEZQ8IX15 550 aa6.93□□□□□ -1.3
CD46-218ENST00000496723 DISC1Q9NRI5 854 aa6.93□□□□□ -1.3
CD46-218ENST00000496723 EIF1AYO14602 144 aaKnown RBP6.92□□□□□ -1.3
CD46-218ENST00000496723 GADD45BO75293 160 aaPredicted RBP6.92□□□□□ -1.3
CD46-218ENST00000496723 GSTP1P09211 210 aaKnown RBP6.92□□□□□ -1.3
CD46-218ENST00000496723 PPP2R3AQ06190 1150 aa6.92□□□□□ -1.3
CD46-218ENST00000496723 CDK5R2Q13319 367 aa6.92□□□□□ -1.3
CD46-218ENST00000496723 PLD6Q8N2A8 252 aaKnown RBP6.92□□□□□ -1.3
CD46-218ENST00000496723 WDR89Q96FK6 387 aaPredicted RBP6.92□□□□□ -1.3
CD46-218ENST00000496723 KRTAP4-7Q9BYR0 210 aa6.92□□□□□ -1.3
CD46-218ENST00000496723 PPP4R2Q9NY27 417 aa6.92□□□□□ -1.3
CD46-218ENST00000496723 PCOLCE2Q9UKZ9 415 aa6.92□□□□□ -1.3
CD46-218ENST00000496723 PCDHGC5Q9Y5F6 944 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms