RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 RRAGCQ9HB90 399 aa26.2■■□□□ 1.78
C9orf3-222ENST00000496567 AATFQ9NY61 560 aaKnown RBP eCLIP26.2■■□□□ 1.78
C9orf3-222ENST00000496567 ADAMTSL1Q8N6G6 1762 aa26.19■■□□□ 1.78
C9orf3-222ENST00000496567 MAGEB6P1A0A0J9YX57 407 aa26.19■■□□□ 1.78
C9orf3-222ENST00000496567 CDC45O75419 566 aa26.19■■□□□ 1.78
C9orf3-222ENST00000496567 EGFRP00533 1210 aa26.19■■□□□ 1.78
C9orf3-222ENST00000496567 NMIQ13287 307 aaPredicted RBP26.19■■□□□ 1.78
C9orf3-222ENST00000496567 CASC1Q6TDU7 716 aa26.19■■□□□ 1.78
C9orf3-222ENST00000496567 PNMA8AQ86V59 439 aaPredicted RBP26.19■■□□□ 1.78
C9orf3-222ENST00000496567 MIGA1Q8NAN2 632 aa26.19■■□□□ 1.78
C9orf3-222ENST00000496567 RUFY2Q8WXA3 655 aa26.19■■□□□ 1.78
C9orf3-222ENST00000496567 OSBP2Q969R2 916 aa26.19■■□□□ 1.78
C9orf3-222ENST00000496567 AIDAQ96BJ3 306 aa26.19■■□□□ 1.78
C9orf3-222ENST00000496567 PUS7LQ9H0K6 701 aaKnown RBP26.19■■□□□ 1.78
C9orf3-222ENST00000496567 PCDHAC2Q9Y5I4 1007 aa26.19■■□□□ 1.78
C9orf3-222ENST00000496567 TRPM4Q8TD43 1214 aa26.18■■□□□ 1.78
C9orf3-222ENST00000496567 FAM227BQ96M60 508 aa26.18■■□□□ 1.78
C9orf3-222ENST00000496567 MCMDC2Q4G0Z9 681 aa26.17■■□□□ 1.78
C9orf3-222ENST00000496567 CWC27Q6UX04 472 aaKnown RBP26.17■■□□□ 1.78
C9orf3-222ENST00000496567 YY1P25490 414 aa26.16■■□□□ 1.78
C9orf3-222ENST00000496567 NBPF9Q3BBW0 867 aa26.16■■□□□ 1.78
C9orf3-222ENST00000496567 RIOK1Q9BRS2 568 aaKnown RBP26.16■■□□□ 1.78
C9orf3-222ENST00000496567 USP40Q9NVE5 1235 aa26.16■■□□□ 1.78
C9orf3-222ENST00000496567 A0A0D9SFI3 127 aa26.16■■□□□ 1.78
C9orf3-222ENST00000496567 SEC62Q99442 399 aaKnown RBP26.16■■□□□ 1.78
C9orf3-222ENST00000496567 TDRD3Q9H7E2 651 aaKnown RBP26.16■■□□□ 1.78
C9orf3-222ENST00000496567 TMOD2Q9NZR1 351 aa26.16■■□□□ 1.78
C9orf3-222ENST00000496567 MBD4O95243 580 aa26.15■■□□□ 1.78
C9orf3-222ENST00000496567 HIRAP54198 1017 aaPredicted RBP26.15■■□□□ 1.78
C9orf3-222ENST00000496567 MFAP1P55081 439 aaKnown RBP26.15■■□□□ 1.78
C9orf3-222ENST00000496567 DYNLL1P63167 89 aaKnown RBP26.15■■□□□ 1.78
C9orf3-222ENST00000496567 CDC42EP5Q6NZY7 148 aa26.15■■□□□ 1.78
C9orf3-222ENST00000496567 GPBP1L1Q9HC44 474 aaPredicted RBP26.15■■□□□ 1.78
C9orf3-222ENST00000496567 NMRK2Q9NPI5 230 aa26.15■■□□□ 1.78
C9orf3-222ENST00000496567 RAD50Q92878 1312 aa26.14■■□□□ 1.78
C9orf3-222ENST00000496567 M0R2C6 588 aa26.14■■□□□ 1.78
C9orf3-222ENST00000496567 GPAA1O43292 621 aa26.13■■□□□ 1.77
C9orf3-222ENST00000496567 RHBDL3P58872 404 aa26.13■■□□□ 1.77
C9orf3-222ENST00000496567 SPDYE2Q495Y8 402 aa26.13■■□□□ 1.77
C9orf3-222ENST00000496567 LCORLQ8N3X6 602 aa26.13■■□□□ 1.77
C9orf3-222ENST00000496567 SH3RF3Q8TEJ3 882 aaPredicted RBP26.13■■□□□ 1.77
C9orf3-222ENST00000496567 ARMT1Q9H993 441 aa26.13■■□□□ 1.77
C9orf3-222ENST00000496567 ZNF70Q9UC06 446 aaPredicted RBP26.13■■□□□ 1.77
C9orf3-222ENST00000496567 EAPPQ56P03 285 aaPredicted RBP26.12■■□□□ 1.77
C9orf3-222ENST00000496567 TEX11Q8IYF3 940 aa26.12■■□□□ 1.77
C9orf3-222ENST00000496567 ZC3H15Q8WU90 426 aaKnown RBP26.12■■□□□ 1.77
C9orf3-222ENST00000496567 STRBPQ96SI9 672 aaKnown RBP26.12■■□□□ 1.77
C9orf3-222ENST00000496567 CRNKL1Q9BZJ0 848 aaKnown RBP26.12■■□□□ 1.77
C9orf3-222ENST00000496567 ECM29Q5VYK3 1845 aa26.12■■□□□ 1.77
C9orf3-222ENST00000496567 CLRN2A0PK11 232 aa26.12■■□□□ 1.77
C9orf3-222ENST00000496567 GNAT2P19087 354 aa26.12■■□□□ 1.77
C9orf3-222ENST00000496567 CCDC171Q6TFL3 1326 aa26.1■■□□□ 1.77
C9orf3-222ENST00000496567 FKBP1CQ5VVH2 108 aa26.1■■□□□ 1.77
C9orf3-222ENST00000496567 VEZTQ9HBM0 779 aa26.1■■□□□ 1.77
C9orf3-222ENST00000496567 SGSM2O43147 1006 aa26.09■■□□□ 1.77
C9orf3-222ENST00000496567 TNFAIP1Q13829 316 aa26.09■■□□□ 1.77
C9orf3-222ENST00000496567 ANGEL2Q5VTE6 544 aaKnown RBP26.09■■□□□ 1.77
C9orf3-222ENST00000496567 CCDC129Q6ZRS4 1044 aa26.09■■□□□ 1.77
C9orf3-222ENST00000496567 ESYT1Q9BSJ8 1104 aa26.09■■□□□ 1.77
C9orf3-222ENST00000496567 IDI2Q9BXS1 227 aa26.09■■□□□ 1.77
C9orf3-222ENST00000496567 GGA3Q9NZ52 723 aa26.09■■□□□ 1.77
C9orf3-222ENST00000496567 SLC4A4Q9Y6R1 1079 aa26.09■■□□□ 1.77
C9orf3-222ENST00000496567 PITPNM2Q9BZ72 1349 aa26.09■■□□□ 1.77
C9orf3-222ENST00000496567 WDHD1O75717 1129 aaPredicted RBP26.08■■□□□ 1.77
C9orf3-222ENST00000496567 USP5P45974 858 aa26.08■■□□□ 1.77
C9orf3-222ENST00000496567 ZNF589Q86UQ0 364 aaPredicted RBP26.08■■□□□ 1.77
C9orf3-222ENST00000496567 APOBEC3FQ8IUX4 373 aaKnown RBP26.08■■□□□ 1.77
C9orf3-222ENST00000496567 TGFBRAP1Q8WUH2 860 aa26.08■■□□□ 1.77
C9orf3-222ENST00000496567 DCPSQ96C86 337 aaKnown RBP26.08■■□□□ 1.77
C9orf3-222ENST00000496567 PGAP2Q9UHJ9 254 aa26.08■■□□□ 1.77
C9orf3-222ENST00000496567 NPM3O75607 178 aaKnown RBP26.07■■□□□ 1.76
C9orf3-222ENST00000496567 ATP8A2Q9NTI2 1148 aa26.07■■□□□ 1.76
C9orf3-222ENST00000496567 CLEC11AQ9Y240 323 aa26.07■■□□□ 1.76
C9orf3-222ENST00000496567 ASTN2O75129 1339 aaPredicted RBP26.07■■□□□ 1.76
C9orf3-222ENST00000496567 RPAP1Q9BWH6 1393 aaPredicted RBP26.07■■□□□ 1.76
C9orf3-222ENST00000496567 TNNI2P48788 182 aa26.07■■□□□ 1.76
C9orf3-222ENST00000496567 CACNB3P54284 484 aa26.07■■□□□ 1.76
C9orf3-222ENST00000496567 DDRGK1Q96HY6 314 aa26.07■■□□□ 1.76
C9orf3-222ENST00000496567 TCP10L2B9ZVM9 353 aa26.06■■□□□ 1.76
C9orf3-222ENST00000496567 PATL2C9JE40 543 aaKnown RBP26.06■■□□□ 1.76
C9orf3-222ENST00000496567 LDHDQ86WU2 507 aa26.06■■□□□ 1.76
C9orf3-222ENST00000496567 PRKAB2O43741 272 aa26.05■■□□□ 1.76
C9orf3-222ENST00000496567 ENTPD3O75355 529 aa26.05■■□□□ 1.76
C9orf3-222ENST00000496567 NFIAQ12857 509 aa26.05■■□□□ 1.76
C9orf3-222ENST00000496567 PICALMQ13492 652 aa26.05■■□□□ 1.76
C9orf3-222ENST00000496567 FAM83AQ86UY5 434 aa26.05■■□□□ 1.76
C9orf3-222ENST00000496567 SDR42E1Q8WUS8 393 aa26.05■■□□□ 1.76
C9orf3-222ENST00000496567 NACAP1Q9BZK3 213 aa26.05■■□□□ 1.76
C9orf3-222ENST00000496567 IL25Q9H293 177 aa26.05■■□□□ 1.76
C9orf3-222ENST00000496567 APPP05067 770 aa26.04■■□□□ 1.76
C9orf3-222ENST00000496567 GIMAP6Q6P9H5 292 aa26.04■■□□□ 1.76
C9orf3-222ENST00000496567 FAM198AQ9UFP1 575 aa26.04■■□□□ 1.76
C9orf3-222ENST00000496567 GSG1L2A8MUP6 293 aa26.03■■□□□ 1.76
C9orf3-222ENST00000496567 EIF5BO60841 1220 aaKnown RBP26.03■■□□□ 1.76
C9orf3-222ENST00000496567 HSPD1P10809 573 aaKnown RBP26.03■■□□□ 1.76
C9orf3-222ENST00000496567 KIAA1211Q6ZU35 1233 aa26.03■■□□□ 1.76
C9orf3-222ENST00000496567 MAPKAPK5Q8IW41 473 aa26.03■■□□□ 1.76
C9orf3-222ENST00000496567 SULF1Q8IWU6 871 aa26.03■■□□□ 1.76
C9orf3-222ENST00000496567 ZNF784Q8NCA9 323 aaPredicted RBP26.03■■□□□ 1.76
C9orf3-222ENST00000496567 DDX4Q9NQI0 724 aaKnown RBP26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms