RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 ZBED3Q96IU2 234 aaPredicted RBP22.12■■□□□ 1.13
TSSC4-210ENST00000496468 GPR75-ASB3A0A0A6YYF3 556 aa22.11■■□□□ 1.13
TSSC4-210ENST00000496468 BAG3O95817 575 aa22.11■■□□□ 1.13
TSSC4-210ENST00000496468 APOBEC3HQ6NTF7 200 aaKnown RBP22.11■■□□□ 1.13
TSSC4-210ENST00000496468 PNMA8AQ86V59 439 aaPredicted RBP22.11■■□□□ 1.13
TSSC4-210ENST00000496468 CERS3Q8IU89 383 aa22.11■■□□□ 1.13
TSSC4-210ENST00000496468 AATFQ9NY61 560 aaKnown RBP eCLIP22.11■■□□□ 1.13
TSSC4-210ENST00000496468 MAGEB6P1A0A0J9YX57 407 aa22.1■■□□□ 1.13
TSSC4-210ENST00000496468 NBPF9Q3BBW0 867 aa22.1■■□□□ 1.13
TSSC4-210ENST00000496468 ZMYM1Q5SVZ6 1142 aa22.1■■□□□ 1.13
TSSC4-210ENST00000496468 PRMT6Q96LA8 375 aaPredicted RBP22.1■■□□□ 1.13
TSSC4-210ENST00000496468 TMOD2Q9NZR1 351 aa22.1■■□□□ 1.13
TSSC4-210ENST00000496468 FOCADQ5VW36 1801 aa22.1■■□□□ 1.13
TSSC4-210ENST00000496468 CLRN2A0PK11 232 aa22.09■■□□□ 1.13
TSSC4-210ENST00000496468 MBD4O95243 580 aa22.09■■□□□ 1.13
TSSC4-210ENST00000496468 PLCG2P16885 1265 aa22.09■■□□□ 1.13
TSSC4-210ENST00000496468 NMIQ13287 307 aaPredicted RBP22.09■■□□□ 1.13
TSSC4-210ENST00000496468 AIDAQ96BJ3 306 aa22.09■■□□□ 1.13
TSSC4-210ENST00000496468 GGA3Q9NZ52 723 aa22.09■■□□□ 1.13
TSSC4-210ENST00000496468 NAV1Q8NEY1 1877 aa22.09■■□□□ 1.13
TSSC4-210ENST00000496468 CDK5RAP2Q96SN8 1893 aa22.09■■□□□ 1.13
TSSC4-210ENST00000496468 A0A0D9SFI3 127 aa22.08■■□□□ 1.13
TSSC4-210ENST00000496468 HIRAP54198 1017 aaPredicted RBP22.08■■□□□ 1.13
TSSC4-210ENST00000496468 SPDYE2Q495Y8 402 aa22.08■■□□□ 1.13
TSSC4-210ENST00000496468 CDC42EP5Q6NZY7 148 aa22.08■■□□□ 1.13
TSSC4-210ENST00000496468 OSBP2Q969R2 916 aa22.08■■□□□ 1.13
TSSC4-210ENST00000496468 FAM227BQ96M60 508 aa22.08■■□□□ 1.13
TSSC4-210ENST00000496468 PUS7LQ9H0K6 701 aaKnown RBP22.08■■□□□ 1.13
TSSC4-210ENST00000496468 TDRD3Q9H7E2 651 aaKnown RBP22.08■■□□□ 1.13
TSSC4-210ENST00000496468 ASTN2O75129 1339 aaPredicted RBP22.07■■□□□ 1.12
TSSC4-210ENST00000496468 M0R2C6 588 aa22.07■■□□□ 1.12
TSSC4-210ENST00000496468 CDC45O75419 566 aa22.07■■□□□ 1.12
TSSC4-210ENST00000496468 PPP4CP60510 307 aa22.07■■□□□ 1.12
TSSC4-210ENST00000496468 DYNLL1P63167 89 aaKnown RBP22.07■■□□□ 1.12
TSSC4-210ENST00000496468 LCORLQ8N3X6 602 aa22.07■■□□□ 1.12
TSSC4-210ENST00000496468 RIOK1Q9BRS2 568 aaKnown RBP22.07■■□□□ 1.12
TSSC4-210ENST00000496468 VEZTQ9HBM0 779 aa22.07■■□□□ 1.12
TSSC4-210ENST00000496468 HELLSQ9NRZ9 838 aa22.07■■□□□ 1.12
TSSC4-210ENST00000496468 USP40Q9NVE5 1235 aa22.07■■□□□ 1.12
TSSC4-210ENST00000496468 RAD50Q92878 1312 aa22.06■■□□□ 1.12
TSSC4-210ENST00000496468 CHMLP26374 656 aa22.06■■□□□ 1.12
TSSC4-210ENST00000496468 RHBDL3P58872 404 aa22.06■■□□□ 1.12
TSSC4-210ENST00000496468 ANGEL2Q5VTE6 544 aaKnown RBP22.06■■□□□ 1.12
TSSC4-210ENST00000496468 CASC1Q6TDU7 716 aa22.06■■□□□ 1.12
TSSC4-210ENST00000496468 CWC27Q6UX04 472 aaKnown RBP22.06■■□□□ 1.12
TSSC4-210ENST00000496468 TEX11Q8IYF3 940 aa22.06■■□□□ 1.12
TSSC4-210ENST00000496468 ZNF784Q8NCA9 323 aaPredicted RBP22.06■■□□□ 1.12
TSSC4-210ENST00000496468 SH3RF3Q8TEJ3 882 aaPredicted RBP22.06■■□□□ 1.12
TSSC4-210ENST00000496468 ARMT1Q9H993 441 aa22.06■■□□□ 1.12
TSSC4-210ENST00000496468 ZNF70Q9UC06 446 aaPredicted RBP22.06■■□□□ 1.12
TSSC4-210ENST00000496468 DDX60LQ5H9U9 1706 aaKnown RBP22.06■■□□□ 1.12
TSSC4-210ENST00000496468 PITPNM2Q9BZ72 1349 aa22.06■■□□□ 1.12
TSSC4-210ENST00000496468 GPAA1O43292 621 aa22.05■■□□□ 1.12
TSSC4-210ENST00000496468 LDHDQ86WU2 507 aa22.05■■□□□ 1.12
TSSC4-210ENST00000496468 APOBEC3FQ8IUX4 373 aaKnown RBP22.05■■□□□ 1.12
TSSC4-210ENST00000496468 ZC3H15Q8WU90 426 aaKnown RBP22.05■■□□□ 1.12
TSSC4-210ENST00000496468 SEC62Q99442 399 aaKnown RBP22.05■■□□□ 1.12
TSSC4-210ENST00000496468 CACNB3P54284 484 aa22.04■■□□□ 1.12
TSSC4-210ENST00000496468 MCMDC2Q4G0Z9 681 aa22.04■■□□□ 1.12
TSSC4-210ENST00000496468 RUFY2Q8WXA3 655 aa22.04■■□□□ 1.12
TSSC4-210ENST00000496468 CRNKL1Q9BZJ0 848 aaKnown RBP22.04■■□□□ 1.12
TSSC4-210ENST00000496468 CLEC11AQ9Y240 323 aa22.04■■□□□ 1.12
TSSC4-210ENST00000496468 POTEIP0CG38 1075 aa22.03■■□□□ 1.12
TSSC4-210ENST00000496468 POTEJP0CG39 1038 aa22.03■■□□□ 1.12
TSSC4-210ENST00000496468 TNFAIP1Q13829 316 aa22.03■■□□□ 1.12
TSSC4-210ENST00000496468 CCDC129Q6ZRS4 1044 aa22.03■■□□□ 1.12
TSSC4-210ENST00000496468 DCPSQ96C86 337 aaKnown RBP22.03■■□□□ 1.12
TSSC4-210ENST00000496468 CCDC171Q6TFL3 1326 aa22.03■■□□□ 1.12
TSSC4-210ENST00000496468 WDHD1O75717 1129 aaPredicted RBP22.02■■□□□ 1.12
TSSC4-210ENST00000496468 MFAP1P55081 439 aaKnown RBP22.02■■□□□ 1.12
TSSC4-210ENST00000496468 PICALMQ13492 652 aa22.02■■□□□ 1.12
TSSC4-210ENST00000496468 TCP10L2B9ZVM9 353 aa22.01■■□□□ 1.11
TSSC4-210ENST00000496468 KIF3CO14782 793 aa22.01■■□□□ 1.11
TSSC4-210ENST00000496468 GNAT2P19087 354 aa22.01■■□□□ 1.11
TSSC4-210ENST00000496468 USP5P45974 858 aa22.01■■□□□ 1.11
TSSC4-210ENST00000496468 TNNI2P48788 182 aa22.01■■□□□ 1.11
TSSC4-210ENST00000496468 NFIAQ12857 509 aa22.01■■□□□ 1.11
TSSC4-210ENST00000496468 FKBP1CQ5VVH2 108 aa22.01■■□□□ 1.11
TSSC4-210ENST00000496468 ZNF589Q86UQ0 364 aaPredicted RBP22.01■■□□□ 1.11
TSSC4-210ENST00000496468 STRBPQ96SI9 672 aaKnown RBP22.01■■□□□ 1.11
TSSC4-210ENST00000496468 IDI2Q9BXS1 227 aa22.01■■□□□ 1.11
TSSC4-210ENST00000496468 SLC4A4Q9Y6R1 1079 aa22.01■■□□□ 1.11
TSSC4-210ENST00000496468 FLT1P17948 1338 aa22.01■■□□□ 1.11
TSSC4-210ENST00000496468 LAMB1P07942 1786 aa22■■□□□ 1.11
TSSC4-210ENST00000496468 SULF1Q8IWU6 871 aa22■■□□□ 1.11
TSSC4-210ENST00000496468 TGFBRAP1Q8WUH2 860 aa22■■□□□ 1.11
TSSC4-210ENST00000496468 PGAP2Q9UHJ9 254 aa22■■□□□ 1.11
TSSC4-210ENST00000496468 RPAP1Q9BWH6 1393 aaPredicted RBP21.99■■□□□ 1.11
TSSC4-210ENST00000496468 COL2A1P02458 1487 aaPredicted RBP21.99■■□□□ 1.11
TSSC4-210ENST00000496468 KRT26Q7Z3Y9 468 aa21.99■■□□□ 1.11
TSSC4-210ENST00000496468 MAPKAPK5Q8IW41 473 aa21.99■■□□□ 1.11
TSSC4-210ENST00000496468 SDR42E1Q8WUS8 393 aa21.99■■□□□ 1.11
TSSC4-210ENST00000496468 IL25Q9H293 177 aa21.99■■□□□ 1.11
TSSC4-210ENST00000496468 DDX4Q9NQI0 724 aaKnown RBP21.99■■□□□ 1.11
TSSC4-210ENST00000496468 FAM198AQ9UFP1 575 aa21.99■■□□□ 1.11
TSSC4-210ENST00000496468 SCAF8Q9UPN6 1271 aaKnown RBP21.99■■□□□ 1.11
TSSC4-210ENST00000496468 CNTNAP1P78357 1384 aa21.99■■□□□ 1.11
TSSC4-210ENST00000496468 SGSM2O43147 1006 aa21.98■■□□□ 1.11
TSSC4-210ENST00000496468 TCP10Q12799 353 aa21.98■■□□□ 1.11
TSSC4-210ENST00000496468 MAP1SQ66K74 1059 aaPredicted RBP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms