RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 CYB5R4Q7L1T6 521 aa17.39■□□□□ 0.38
UBXN11-216ENST00000496466 FMR1NBQ8N0W7 255 aaPredicted RBP17.39■□□□□ 0.38
UBXN11-216ENST00000496466 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.39■□□□□ 0.37
UBXN11-216ENST00000496466 GOLGA6L19H0YKK7 550 aa17.39■□□□□ 0.37
UBXN11-216ENST00000496466 ERFEQ4G0M1 354 aa17.39■□□□□ 0.37
UBXN11-216ENST00000496466 C3orf67Q6ZVT6 689 aa17.39■□□□□ 0.37
UBXN11-216ENST00000496466 GJB4Q9NTQ9 266 aa17.39■□□□□ 0.37
UBXN11-216ENST00000496466 COL5A3P25940 1745 aaPredicted RBP17.39■□□□□ 0.37
UBXN11-216ENST00000496466 CDC25BP30305 580 aa17.38■□□□□ 0.37
UBXN11-216ENST00000496466 BCAMP50895 628 aa17.38■□□□□ 0.37
UBXN11-216ENST00000496466 STK38Q15208 465 aa17.38■□□□□ 0.37
UBXN11-216ENST00000496466 MYSM1Q5VVJ2 828 aa17.38■□□□□ 0.37
UBXN11-216ENST00000496466 SARM1Q6SZW1 724 aa17.38■□□□□ 0.37
UBXN11-216ENST00000496466 BRAPQ7Z569 592 aa17.38■□□□□ 0.37
UBXN11-216ENST00000496466 POLR3EQ9NVU0 708 aa17.38■□□□□ 0.37
UBXN11-216ENST00000496466 COL4A1P02462 1669 aa17.38■□□□□ 0.37
UBXN11-216ENST00000496466 RTL9Q8NET4 1388 aa17.38■□□□□ 0.37
UBXN11-216ENST00000496466 ARAP2Q8WZ64 1704 aa17.38■□□□□ 0.37
UBXN11-216ENST00000496466 SH2B2O14492 632 aaPredicted RBP17.38■□□□□ 0.37
UBXN11-216ENST00000496466 YEATS4O95619 227 aa17.38■□□□□ 0.37
UBXN11-216ENST00000496466 APPP05067 770 aa17.38■□□□□ 0.37
UBXN11-216ENST00000496466 CLEC4GQ6UXB4 293 aa17.38■□□□□ 0.37
UBXN11-216ENST00000496466 ANO10Q9NW15 660 aa17.38■□□□□ 0.37
UBXN11-216ENST00000496466 ANGEL1Q9UNK9 670 aaKnown RBP17.38■□□□□ 0.37
UBXN11-216ENST00000496466 A0A087WWV3 80 aa17.37■□□□□ 0.37
UBXN11-216ENST00000496466 A0A1B0GVL5 298 aa17.37■□□□□ 0.37
UBXN11-216ENST00000496466 KIF28PB7ZC32 967 aa17.37■□□□□ 0.37
UBXN11-216ENST00000496466 CHRNDQ07001 517 aa17.37■□□□□ 0.37
UBXN11-216ENST00000496466 LRMPQ12912 555 aa17.37■□□□□ 0.37
UBXN11-216ENST00000496466 BICDL1Q6ZP65 573 aa17.37■□□□□ 0.37
UBXN11-216ENST00000496466 KCNG4Q8TDN1 519 aa17.37■□□□□ 0.37
UBXN11-216ENST00000496466 CLIP2Q9UDT6 1046 aa17.37■□□□□ 0.37
UBXN11-216ENST00000496466 ZMYM6O95789 1325 aa17.37■□□□□ 0.37
UBXN11-216ENST00000496466 NDUFA8P51970 172 aa17.37■□□□□ 0.37
UBXN11-216ENST00000496466 KIF23Q02241 960 aaPredicted RBP17.37■□□□□ 0.37
UBXN11-216ENST00000496466 SF3A1Q15459 793 aaKnown RBP17.37■□□□□ 0.37
UBXN11-216ENST00000496466 MAGEB6Q8N7X4 407 aa17.37■□□□□ 0.37
UBXN11-216ENST00000496466 STRBPQ96SI9 672 aaKnown RBP17.37■□□□□ 0.37
UBXN11-216ENST00000496466 SPTLC2O15270 562 aa17.36■□□□□ 0.37
UBXN11-216ENST00000496466 DHX40Q8IX18 779 aaKnown RBP17.36■□□□□ 0.37
UBXN11-216ENST00000496466 GTF2F1P35269 517 aaKnown RBP eCLIP17.36■□□□□ 0.37
UBXN11-216ENST00000496466 FAM182BQ5T319 152 aa17.36■□□□□ 0.37
UBXN11-216ENST00000496466 RGS22Q8NE09 1264 aa17.36■□□□□ 0.37
UBXN11-216ENST00000496466 ERCC4Q92889 916 aaPredicted RBP17.36■□□□□ 0.37
UBXN11-216ENST00000496466 AIDAQ96BJ3 306 aa17.36■□□□□ 0.37
UBXN11-216ENST00000496466 BCORQ6W2J9 1755 aa17.35■□□□□ 0.37
UBXN11-216ENST00000496466 WTIPA6NIX2 430 aaPredicted RBP17.35■□□□□ 0.37
UBXN11-216ENST00000496466 B4E1Z4 1266 aa17.35■□□□□ 0.37
UBXN11-216ENST00000496466 METAP2P50579 478 aaKnown RBP eCLIP17.35■□□□□ 0.37
UBXN11-216ENST00000496466 ALX1Q15699 326 aa17.35■□□□□ 0.37
UBXN11-216ENST00000496466 CCDC144BQ3MJ40 725 aa17.35■□□□□ 0.37
UBXN11-216ENST00000496466 SYNE3Q6ZMZ3 975 aa17.35■□□□□ 0.37
UBXN11-216ENST00000496466 CCDC144CPQ8IYA2 1237 aa17.35■□□□□ 0.37
UBXN11-216ENST00000496466 MAP7D2Q96T17 732 aa17.35■□□□□ 0.37
UBXN11-216ENST00000496466 SENP2Q9HC62 589 aa17.35■□□□□ 0.37
UBXN11-216ENST00000496466 BECN2A8MW95 431 aa17.35■□□□□ 0.37
UBXN11-216ENST00000496466 MAP3K12Q12852 859 aa17.35■□□□□ 0.37
UBXN11-216ENST00000496466 ANO1Q5XXA6 986 aa17.35■□□□□ 0.37
UBXN11-216ENST00000496466 TBC1D9BQ66K14 1250 aa17.35■□□□□ 0.37
UBXN11-216ENST00000496466 MRFAP1L1Q96HT8 127 aa17.35■□□□□ 0.37
UBXN11-216ENST00000496466 SDF4Q9BRK5 362 aa17.35■□□□□ 0.37
UBXN11-216ENST00000496466 BCL2L12Q9HB09 334 aa17.35■□□□□ 0.37
UBXN11-216ENST00000496466 LAMB2P55268 1798 aa17.34■□□□□ 0.37
UBXN11-216ENST00000496466 NEDD4P46934 1319 aa17.34■□□□□ 0.37
UBXN11-216ENST00000496466 APOA5Q6Q788 366 aa17.34■□□□□ 0.37
UBXN11-216ENST00000496466 FNBP4Q8N3X1 1017 aaPredicted RBP17.34■□□□□ 0.37
UBXN11-216ENST00000496466 IGDCC4Q8TDY8 1250 aa17.34■□□□□ 0.37
UBXN11-216ENST00000496466 AIFM3Q96NN9 605 aa17.34■□□□□ 0.37
UBXN11-216ENST00000496466 CDC5LQ99459 802 aaKnown RBP17.34■□□□□ 0.37
UBXN11-216ENST00000496466 CNTNAP4Q9C0A0 1308 aa17.34■□□□□ 0.37
UBXN11-216ENST00000496466 IQSEC3Q9UPP2 1182 aaPredicted RBP17.34■□□□□ 0.37
UBXN11-216ENST00000496466 MBD4O95243 580 aa17.33■□□□□ 0.37
UBXN11-216ENST00000496466 RXRAP19793 462 aa17.33■□□□□ 0.37
UBXN11-216ENST00000496466 CDC27P30260 824 aa17.33■□□□□ 0.37
UBXN11-216ENST00000496466 CEP57L1Q8IYX8 460 aa17.33■□□□□ 0.37
UBXN11-216ENST00000496466 CACTINQ8WUQ7 758 aaKnown RBP17.33■□□□□ 0.37
UBXN11-216ENST00000496466 TMEM87BQ96K49 555 aa17.33■□□□□ 0.37
UBXN11-216ENST00000496466 ALG1Q9BT22 464 aa17.33■□□□□ 0.37
UBXN11-216ENST00000496466 ARMT1Q9H993 441 aa17.33■□□□□ 0.37
UBXN11-216ENST00000496466 PATL2C9JE40 543 aaKnown RBP17.33■□□□□ 0.36
UBXN11-216ENST00000496466 CDKL5O76039 1030 aa17.33■□□□□ 0.36
UBXN11-216ENST00000496466 EPB41L4AQ9HCS5 686 aaPredicted RBP17.33■□□□□ 0.36
UBXN11-216ENST00000496466 INCENPQ9NQS7 918 aa17.33■□□□□ 0.36
UBXN11-216ENST00000496466 SRP68Q9UHB9 627 aaKnown RBP17.33■□□□□ 0.36
UBXN11-216ENST00000496466 USP21Q9UK80 565 aa17.33■□□□□ 0.36
UBXN11-216ENST00000496466 SF3B3Q15393 1217 aaKnown RBP17.32■□□□□ 0.36
UBXN11-216ENST00000496466 AXDND1Q5T1B0 1012 aaPredicted RBP17.32■□□□□ 0.36
UBXN11-216ENST00000496466 ANKRD18AQ8IVF6 992 aa17.32■□□□□ 0.36
UBXN11-216ENST00000496466 IFNL3Q8IZI9 196 aa17.32■□□□□ 0.36
UBXN11-216ENST00000496466 LY9Q9HBG7 655 aa17.32■□□□□ 0.36
UBXN11-216ENST00000496466 KIAA1468Q9P260 1216 aa17.32■□□□□ 0.36
UBXN11-216ENST00000496466 ZNF831Q5JPB2 1677 aa17.32■□□□□ 0.36
UBXN11-216ENST00000496466 AOPEPQ8N6M6 819 aa17.32■□□□□ 0.36
UBXN11-216ENST00000496466 NAT10Q9H0A0 1025 aaKnown RBP17.32■□□□□ 0.36
UBXN11-216ENST00000496466 DOCK2Q92608 1830 aa17.31■□□□□ 0.36
UBXN11-216ENST00000496466 ZBTB43O43298 467 aa17.31■□□□□ 0.36
UBXN11-216ENST00000496466 GTF2E1P29083 439 aaPredicted RBP17.31■□□□□ 0.36
UBXN11-216ENST00000496466 KRT40Q6A162 431 aa17.31■□□□□ 0.36
UBXN11-216ENST00000496466 CPLX2Q6PUV4 134 aaKnown RBP17.31■□□□□ 0.36
UBXN11-216ENST00000496466 MICU3Q86XE3 530 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms