RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 ANTXR1Q9H6X2 564 aa11.72□□□□□ -0.53
PRPF3-207ENST00000496202 VEZTQ9HBM0 779 aa11.72□□□□□ -0.53
PRPF3-207ENST00000496202 DAGLAQ9Y4D2 1042 aa11.72□□□□□ -0.53
PRPF3-207ENST00000496202 PITPNM2Q9BZ72 1349 aa11.71□□□□□ -0.53
PRPF3-207ENST00000496202 CLRN2A0PK11 232 aa11.71□□□□□ -0.53
PRPF3-207ENST00000496202 MAP4K4O95819 1239 aaPredicted RBP11.71□□□□□ -0.53
PRPF3-207ENST00000496202 CYP7A1P22680 504 aa11.71□□□□□ -0.53
PRPF3-207ENST00000496202 FSTL1Q12841 308 aa11.71□□□□□ -0.53
PRPF3-207ENST00000496202 ANGEL2Q5VTE6 544 aaKnown RBP11.71□□□□□ -0.53
PRPF3-207ENST00000496202 MAP1SQ66K74 1059 aaPredicted RBP11.71□□□□□ -0.53
PRPF3-207ENST00000496202 ZSCAN25Q6NSZ9 544 aa11.71□□□□□ -0.53
PRPF3-207ENST00000496202 TMED8Q6PL24 325 aaPredicted RBP11.71□□□□□ -0.53
PRPF3-207ENST00000496202 KRT26Q7Z3Y9 468 aa11.71□□□□□ -0.53
PRPF3-207ENST00000496202 PLEKHM2Q8IWE5 1019 aa11.71□□□□□ -0.53
PRPF3-207ENST00000496202 MAGEB6Q8N7X4 407 aa11.71□□□□□ -0.53
PRPF3-207ENST00000496202 NSUN4Q96CB9 384 aaKnown RBP11.71□□□□□ -0.53
PRPF3-207ENST00000496202 ZBED3Q96IU2 234 aaPredicted RBP11.71□□□□□ -0.53
PRPF3-207ENST00000496202 PRMT6Q96LA8 375 aaPredicted RBP11.71□□□□□ -0.53
PRPF3-207ENST00000496202 PCDHAC2Q9Y5I4 1007 aa11.71□□□□□ -0.53
PRPF3-207ENST00000496202 GAKO14976 1311 aa11.7□□□□□ -0.54
PRPF3-207ENST00000496202 ASTN2O75129 1339 aaPredicted RBP11.7□□□□□ -0.54
PRPF3-207ENST00000496202 BAG3O95817 575 aa11.7□□□□□ -0.54
PRPF3-207ENST00000496202 PDE6AP16499 860 aa11.7□□□□□ -0.54
PRPF3-207ENST00000496202 BTDP43251 543 aa11.7□□□□□ -0.54
PRPF3-207ENST00000496202 TNFAIP1Q13829 316 aa11.7□□□□□ -0.54
PRPF3-207ENST00000496202 SPDYE2Q495Y8 402 aa11.7□□□□□ -0.54
PRPF3-207ENST00000496202 SLC9C2Q5TAH2 1124 aa11.7□□□□□ -0.54
PRPF3-207ENST00000496202 CDC37L1Q7L3B6 337 aa11.7□□□□□ -0.54
PRPF3-207ENST00000496202 CNTROBQ8N137 903 aa11.7□□□□□ -0.54
PRPF3-207ENST00000496202 FSD1Q9BTV5 496 aa11.7□□□□□ -0.54
PRPF3-207ENST00000496202 TDRD3Q9H7E2 651 aaKnown RBP11.7□□□□□ -0.54
PRPF3-207ENST00000496202 ZNF70Q9UC06 446 aaPredicted RBP11.7□□□□□ -0.54
PRPF3-207ENST00000496202 PGAP2Q9UHJ9 254 aa11.7□□□□□ -0.54
PRPF3-207ENST00000496202 TRIM6-TRIM34B2RNG4 842 aa11.69□□□□□ -0.54
PRPF3-207ENST00000496202 PLCG2P16885 1265 aa11.69□□□□□ -0.54
PRPF3-207ENST00000496202 PDE4AP27815 886 aa11.69□□□□□ -0.54
PRPF3-207ENST00000496202 TNNI2P48788 182 aa11.69□□□□□ -0.54
PRPF3-207ENST00000496202 APOBEC3HQ6NTF7 200 aaKnown RBP11.69□□□□□ -0.54
PRPF3-207ENST00000496202 USP48Q86UV5 1035 aa11.69□□□□□ -0.54
PRPF3-207ENST00000496202 KBTBD3Q8NAB2 608 aa11.69□□□□□ -0.54
PRPF3-207ENST00000496202 FAM163AQ96GL9 167 aaPredicted RBP11.69□□□□□ -0.54
PRPF3-207ENST00000496202 GLIS2Q9BZE0 524 aaPredicted RBP11.69□□□□□ -0.54
PRPF3-207ENST00000496202 OSBPL3Q9H4L5 887 aa11.69□□□□□ -0.54
PRPF3-207ENST00000496202 USP40Q9NVE5 1235 aa11.69□□□□□ -0.54
PRPF3-207ENST00000496202 TRPM7Q96QT4 1865 aa11.69□□□□□ -0.54
PRPF3-207ENST00000496202 GPR75-ASB3A0A0A6YYF3 556 aa11.68□□□□□ -0.54
PRPF3-207ENST00000496202 TCP10L2B9ZVM9 353 aa11.68□□□□□ -0.54
PRPF3-207ENST00000496202 ADM5C9JUS6 153 aa11.68□□□□□ -0.54
PRPF3-207ENST00000496202 ZFYP08048 801 aaPredicted RBP11.68□□□□□ -0.54
PRPF3-207ENST00000496202 CDC42EP5Q6NZY7 148 aa11.68□□□□□ -0.54
PRPF3-207ENST00000496202 CERS3Q8IU89 383 aa11.68□□□□□ -0.54
PRPF3-207ENST00000496202 ZNF384Q8TF68 577 aa11.68□□□□□ -0.54
PRPF3-207ENST00000496202 RILPL2Q969X0 211 aa11.68□□□□□ -0.54
PRPF3-207ENST00000496202 EVI5LQ96CN4 794 aa11.68□□□□□ -0.54
PRPF3-207ENST00000496202 ZNF532Q9HCE3 1301 aa11.67□□□□□ -0.54
PRPF3-207ENST00000496202 ADD2P35612 726 aa11.67□□□□□ -0.54
PRPF3-207ENST00000496202 CACNB3P54284 484 aa11.67□□□□□ -0.54
PRPF3-207ENST00000496202 TEX11Q8IYF3 940 aa11.67□□□□□ -0.54
PRPF3-207ENST00000496202 MIGA1Q8NAN2 632 aa11.67□□□□□ -0.54
PRPF3-207ENST00000496202 ZNF408Q9H9D4 720 aa11.67□□□□□ -0.54
PRPF3-207ENST00000496202 AATFQ9NY61 560 aaKnown RBP eCLIP11.67□□□□□ -0.54
PRPF3-207ENST00000496202 PPP2R3BQ9Y5P8 575 aa11.67□□□□□ -0.54
PRPF3-207ENST00000496202 MAGEB6P1A0A0J9YX57 407 aa11.66□□□□□ -0.54
PRPF3-207ENST00000496202 TRAF5O00463 557 aa11.66□□□□□ -0.54
PRPF3-207ENST00000496202 RNF113AO15541 343 aaKnown RBP11.66□□□□□ -0.54
PRPF3-207ENST00000496202 NF2P35240 595 aa11.66□□□□□ -0.54
PRPF3-207ENST00000496202 RGS3P49796 1198 aa11.66□□□□□ -0.54
PRPF3-207ENST00000496202 UBE3CQ15386 1083 aa11.66□□□□□ -0.54
PRPF3-207ENST00000496202 TTC22Q5TAA0 569 aa11.66□□□□□ -0.54
PRPF3-207ENST00000496202 FKBP1CQ5VVH2 108 aa11.66□□□□□ -0.54
PRPF3-207ENST00000496202 ADGRA1Q86SQ6 560 aa11.66□□□□□ -0.54
PRPF3-207ENST00000496202 SH3RF3Q8TEJ3 882 aaPredicted RBP11.66□□□□□ -0.54
PRPF3-207ENST00000496202 CDCA5Q96FF9 252 aa11.66□□□□□ -0.54
PRPF3-207ENST00000496202 DEFB129Q9H1M3 183 aa11.66□□□□□ -0.54
PRPF3-207ENST00000496202 SCAF8Q9UPN6 1271 aaKnown RBP11.66□□□□□ -0.54
PRPF3-207ENST00000496202 CDK5RAP2Q96SN8 1893 aa11.66□□□□□ -0.54
PRPF3-207ENST00000496202 TULP1O00294 542 aaPredicted RBP11.65□□□□□ -0.54
PRPF3-207ENST00000496202 PPP4CP60510 307 aa11.65□□□□□ -0.54
PRPF3-207ENST00000496202 C1QTNF8P60827 252 aa11.65□□□□□ -0.54
PRPF3-207ENST00000496202 DYNLL1P63167 89 aaKnown RBP11.65□□□□□ -0.54
PRPF3-207ENST00000496202 PICALMQ13492 652 aa11.65□□□□□ -0.54
PRPF3-207ENST00000496202 RASA3Q14644 834 aa11.65□□□□□ -0.54
PRPF3-207ENST00000496202 ZSCAN29Q8IWY8 852 aaPredicted RBP11.65□□□□□ -0.54
PRPF3-207ENST00000496202 APPBP2Q92624 585 aa11.65□□□□□ -0.54
PRPF3-207ENST00000496202 AIDAQ96BJ3 306 aa11.65□□□□□ -0.54
PRPF3-207ENST00000496202 CRNKL1Q9BZJ0 848 aaKnown RBP11.65□□□□□ -0.54
PRPF3-207ENST00000496202 RFX7Q2KHR2 1363 aa11.65□□□□□ -0.55
PRPF3-207ENST00000496202 TCRBV5S4A2TA0A5A2 114 aa11.64□□□□□ -0.55
PRPF3-207ENST00000496202 MBD4O95243 580 aa11.64□□□□□ -0.55
PRPF3-207ENST00000496202 CELF2O95319 508 aaKnown RBP11.64□□□□□ -0.55
PRPF3-207ENST00000496202 ITGBL1O95965 494 aaPredicted RBP11.64□□□□□ -0.55
PRPF3-207ENST00000496202 USP5P45974 858 aa11.64□□□□□ -0.55
PRPF3-207ENST00000496202 RHBDL3P58872 404 aa11.64□□□□□ -0.55
PRPF3-207ENST00000496202 TCP10Q12799 353 aa11.64□□□□□ -0.55
PRPF3-207ENST00000496202 TTLL12Q14166 644 aaPredicted RBP11.64□□□□□ -0.55
PRPF3-207ENST00000496202 SUPT20HL1Q3ZLR7 823 aa11.64□□□□□ -0.55
PRPF3-207ENST00000496202 FAM83AQ86UY5 434 aa11.64□□□□□ -0.55
PRPF3-207ENST00000496202 FAM151AQ8WW52 585 aa11.64□□□□□ -0.55
PRPF3-207ENST00000496202 HOOK2Q96ED9 719 aa11.64□□□□□ -0.55
PRPF3-207ENST00000496202 DIAPH3Q9NSV4 1193 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms