RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 TAF1DQ9H5J8 278 aaPredicted RBP16.3■□□□□ 0.2
PTPN7-218ENST00000496197 AATFQ9NY61 560 aaKnown RBP eCLIP16.3■□□□□ 0.2
PTPN7-218ENST00000496197 GPR75-ASB3A0A0A6YYF3 556 aa16.29■□□□□ 0.2
PTPN7-218ENST00000496197 H7C1D1 291 aa16.29■□□□□ 0.2
PTPN7-218ENST00000496197 YY1P25490 414 aa16.29■□□□□ 0.2
PTPN7-218ENST00000496197 CHMLP26374 656 aa16.29■□□□□ 0.2
PTPN7-218ENST00000496197 RHBDL3P58872 404 aa16.29■□□□□ 0.2
PTPN7-218ENST00000496197 GSTO1P78417 241 aa16.29■□□□□ 0.2
PTPN7-218ENST00000496197 CCDC129Q6ZRS4 1044 aa16.29■□□□□ 0.2
PTPN7-218ENST00000496197 LCORLQ8N3X6 602 aa16.29■□□□□ 0.2
PTPN7-218ENST00000496197 APPBP2Q92624 585 aa16.29■□□□□ 0.2
PTPN7-218ENST00000496197 TDRD3Q9H7E2 651 aaKnown RBP16.29■□□□□ 0.2
PTPN7-218ENST00000496197 ADARB2Q9NS39 739 aaKnown RBP16.29■□□□□ 0.2
PTPN7-218ENST00000496197 SCAF8Q9UPN6 1271 aaKnown RBP16.29■□□□□ 0.2
PTPN7-218ENST00000496197 ZFYP08048 801 aaPredicted RBP16.29■□□□□ 0.2
PTPN7-218ENST00000496197 CACNB3P54284 484 aa16.29■□□□□ 0.2
PTPN7-218ENST00000496197 DLGAP5Q15398 846 aa16.29■□□□□ 0.2
PTPN7-218ENST00000496197 ZSCAN25Q6NSZ9 544 aa16.29■□□□□ 0.2
PTPN7-218ENST00000496197 CDC42EP5Q6NZY7 148 aa16.29■□□□□ 0.2
PTPN7-218ENST00000496197 ZNF589Q86UQ0 364 aaPredicted RBP16.29■□□□□ 0.2
PTPN7-218ENST00000496197 SH3RF3Q8TEJ3 882 aaPredicted RBP16.29■□□□□ 0.2
PTPN7-218ENST00000496197 MYH1P12882 1939 aa16.28■□□□□ 0.2
PTPN7-218ENST00000496197 CLRN2A0PK11 232 aa16.28■□□□□ 0.2
PTPN7-218ENST00000496197 IGSF3O75054 1194 aa16.28■□□□□ 0.2
PTPN7-218ENST00000496197 MBD4O95243 580 aa16.28■□□□□ 0.2
PTPN7-218ENST00000496197 CWC27Q6UX04 472 aaKnown RBP16.28■□□□□ 0.2
PTPN7-218ENST00000496197 ARMT1Q9H993 441 aa16.28■□□□□ 0.2
PTPN7-218ENST00000496197 SIPA1L1O43166 1804 aa16.28■□□□□ 0.2
PTPN7-218ENST00000496197 IQCA1LA6NCM1 817 aa16.27■□□□□ 0.19
PTPN7-218ENST00000496197 LDHCP07864 332 aa16.27■□□□□ 0.19
PTPN7-218ENST00000496197 LAMB1P07942 1786 aa16.26■□□□□ 0.19
PTPN7-218ENST00000496197 MAGEB6P1A0A0J9YX57 407 aa16.26■□□□□ 0.19
PTPN7-218ENST00000496197 FOXP2O15409 715 aa16.26■□□□□ 0.19
PTPN7-218ENST00000496197 PRKAB2O43741 272 aa16.26■□□□□ 0.19
PTPN7-218ENST00000496197 VEGFAP15692 232 aaPredicted RBP16.26■□□□□ 0.19
PTPN7-218ENST00000496197 PPP4CP60510 307 aa16.26■□□□□ 0.19
PTPN7-218ENST00000496197 NFIAQ12857 509 aa16.26■□□□□ 0.19
PTPN7-218ENST00000496197 SLF2Q8IX21 1173 aa16.26■□□□□ 0.19
PTPN7-218ENST00000496197 DDX4Q9NQI0 724 aaKnown RBP16.26■□□□□ 0.19
PTPN7-218ENST00000496197 DIAPH3Q9NSV4 1193 aa16.26■□□□□ 0.19
PTPN7-218ENST00000496197 USP40Q9NVE5 1235 aa16.26■□□□□ 0.19
PTPN7-218ENST00000496197 ZNF70Q9UC06 446 aaPredicted RBP16.26■□□□□ 0.19
PTPN7-218ENST00000496197 GPAA1O43292 621 aa16.25■□□□□ 0.19
PTPN7-218ENST00000496197 WDHD1O75717 1129 aaPredicted RBP16.25■□□□□ 0.19
PTPN7-218ENST00000496197 MMP14P50281 582 aa16.25■□□□□ 0.19
PTPN7-218ENST00000496197 SPDYE2Q495Y8 402 aa16.25■□□□□ 0.19
PTPN7-218ENST00000496197 EAPPQ56P03 285 aaPredicted RBP16.25■□□□□ 0.19
PTPN7-218ENST00000496197 ANGEL2Q5VTE6 544 aaKnown RBP16.25■□□□□ 0.19
PTPN7-218ENST00000496197 USP50Q70EL3 339 aaPredicted RBP16.25■□□□□ 0.19
PTPN7-218ENST00000496197 STRBPQ96SI9 672 aaKnown RBP16.25■□□□□ 0.19
PTPN7-218ENST00000496197 HELLSQ9NRZ9 838 aa16.25■□□□□ 0.19
PTPN7-218ENST00000496197 GGA3Q9NZ52 723 aa16.25■□□□□ 0.19
PTPN7-218ENST00000496197 CDC45O75419 566 aa16.24■□□□□ 0.19
PTPN7-218ENST00000496197 LRRFIP1Q32MZ4 808 aaKnown RBP16.24■□□□□ 0.19
PTPN7-218ENST00000496197 MCMDC2Q4G0Z9 681 aa16.24■□□□□ 0.19
PTPN7-218ENST00000496197 VPS53Q5VIR6 699 aa16.24■□□□□ 0.19
PTPN7-218ENST00000496197 TMED8Q6PL24 325 aaPredicted RBP16.24■□□□□ 0.19
PTPN7-218ENST00000496197 DLK2Q6UY11 383 aa16.24■□□□□ 0.19
PTPN7-218ENST00000496197 TICAM2Q86XR7 235 aa16.24■□□□□ 0.19
PTPN7-218ENST00000496197 SDR42E1Q8WUS8 393 aa16.24■□□□□ 0.19
PTPN7-218ENST00000496197 CNTNAP1P78357 1384 aa16.24■□□□□ 0.19
PTPN7-218ENST00000496197 HIP1O00291 1037 aa16.23■□□□□ 0.19
PTPN7-218ENST00000496197 KIF3CO14782 793 aa16.23■□□□□ 0.19
PTPN7-218ENST00000496197 ZFPM1Q8IX07 1006 aa16.23■□□□□ 0.19
PTPN7-218ENST00000496197 ZNF784Q8NCA9 323 aaPredicted RBP16.23■□□□□ 0.19
PTPN7-218ENST00000496197 AIDAQ96BJ3 306 aa16.23■□□□□ 0.19
PTPN7-218ENST00000496197 GPBP1L1Q9HC44 474 aaPredicted RBP16.23■□□□□ 0.19
PTPN7-218ENST00000496197 FAM198AQ9UFP1 575 aa16.23■□□□□ 0.19
PTPN7-218ENST00000496197 LAMA4Q16363 1823 aa16.23■□□□□ 0.19
PTPN7-218ENST00000496197 TCP10L2B9ZVM9 353 aa16.22■□□□□ 0.19
PTPN7-218ENST00000496197 SGSM2O43147 1006 aa16.22■□□□□ 0.19
PTPN7-218ENST00000496197 BAG3O95817 575 aa16.22■□□□□ 0.19
PTPN7-218ENST00000496197 EVX2Q03828 476 aa16.22■□□□□ 0.19
PTPN7-218ENST00000496197 CDAN1Q8IWY9 1227 aa16.22■□□□□ 0.19
PTPN7-218ENST00000496197 TEX11Q8IYF3 940 aa16.22■□□□□ 0.19
PTPN7-218ENST00000496197 TGFBRAP1Q8WUH2 860 aa16.22■□□□□ 0.19
PTPN7-218ENST00000496197 ESYT1Q9BSJ8 1104 aa16.22■□□□□ 0.19
PTPN7-218ENST00000496197 VEZTQ9HBM0 779 aa16.22■□□□□ 0.19
PTPN7-218ENST00000496197 EPB41L4AQ9HCS5 686 aaPredicted RBP16.22■□□□□ 0.19
PTPN7-218ENST00000496197 CCDC171Q6TFL3 1326 aa16.22■□□□□ 0.19
PTPN7-218ENST00000496197 PICALMQ13492 652 aa16.22■□□□□ 0.19
PTPN7-218ENST00000496197 C8orf34Q49A92 452 aa16.22■□□□□ 0.19
PTPN7-218ENST00000496197 MAPKAPK5Q8IW41 473 aa16.22■□□□□ 0.19
PTPN7-218ENST00000496197 NOL10Q9BSC4 688 aaKnown RBP16.22■□□□□ 0.19
PTPN7-218ENST00000496197 MKRN1Q9UHC7 482 aaKnown RBP16.22■□□□□ 0.19
PTPN7-218ENST00000496197 PGAP2Q9UHJ9 254 aa16.22■□□□□ 0.19
PTPN7-218ENST00000496197 FLT1P17948 1338 aa16.21■□□□□ 0.19
PTPN7-218ENST00000496197 GSG1L2A8MUP6 293 aa16.21■□□□□ 0.19
PTPN7-218ENST00000496197 SMIM22K7EJ46 135 aa16.21■□□□□ 0.19
PTPN7-218ENST00000496197 TCP10Q12799 353 aa16.21■□□□□ 0.19
PTPN7-218ENST00000496197 PNMA8AQ86V59 439 aaPredicted RBP16.21■□□□□ 0.19
PTPN7-218ENST00000496197 IDI2Q9BXS1 227 aa16.21■□□□□ 0.19
PTPN7-218ENST00000496197 SLC4A4Q9Y6R1 1079 aa16.21■□□□□ 0.19
PTPN7-218ENST00000496197 RAD50Q92878 1312 aa16.2■□□□□ 0.18
PTPN7-218ENST00000496197 ADM5C9JUS6 153 aa16.2■□□□□ 0.18
PTPN7-218ENST00000496197 MYO1BO43795 1136 aa16.2■□□□□ 0.18
PTPN7-218ENST00000496197 SLURP2P0DP57 97 aa16.2■□□□□ 0.18
PTPN7-218ENST00000496197 PLCG2P16885 1265 aa16.2■□□□□ 0.18
PTPN7-218ENST00000496197 PTH1RQ03431 593 aa16.2■□□□□ 0.18
PTPN7-218ENST00000496197 MAP1SQ66K74 1059 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms