RNA–Protein interactions for RNA: ENST00000495973.5

TBRG4-217, Transcript of transforming growth factor beta regulator 4, humanhuman

TSL 1 (best)

Gene TBRG4, Length 3,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBRG4-217ENST00000495973 CLIC4Q9Y696 253 aa13.02□□□□□ -0.32
TBRG4-217ENST00000495973 CCDC69A6NI79 296 aa13.02□□□□□ -0.33
TBRG4-217ENST00000495973 SASS6Q6UVJ0 657 aa13.02□□□□□ -0.33
TBRG4-217ENST00000495973 DRC7Q8IY82 874 aa13.02□□□□□ -0.33
TBRG4-217ENST00000495973 FSIP1Q8NA03 581 aa13.02□□□□□ -0.33
TBRG4-217ENST00000495973 TAF1P21675 1872 aa13.02□□□□□ -0.33
TBRG4-217ENST00000495973 LETM1O95202 739 aaPredicted RBP13.01□□□□□ -0.33
TBRG4-217ENST00000495973 EVX2Q03828 476 aa13.01□□□□□ -0.33
TBRG4-217ENST00000495973 CAVIN4Q5BKX8 364 aa13.01□□□□□ -0.33
TBRG4-217ENST00000495973 ISM2Q6H9L7 571 aa13.01□□□□□ -0.33
TBRG4-217ENST00000495973 CCDC73Q6ZRK6 1079 aa13.01□□□□□ -0.33
TBRG4-217ENST00000495973 BARGINQ6ZT62 677 aa13.01□□□□□ -0.33
TBRG4-217ENST00000495973 ALG1Q9BT22 464 aa13.01□□□□□ -0.33
TBRG4-217ENST00000495973 GOLPH3LQ9H4A5 285 aa13.01□□□□□ -0.33
TBRG4-217ENST00000495973 TACC3Q9Y6A5 838 aa13.01□□□□□ -0.33
TBRG4-217ENST00000495973 ABCC12Q96J65 1359 aa13.01□□□□□ -0.33
TBRG4-217ENST00000495973 GSG1L2A8MUP6 293 aa13.01□□□□□ -0.33
TBRG4-217ENST00000495973 PATL2C9JE40 543 aaKnown RBP13.01□□□□□ -0.33
TBRG4-217ENST00000495973 ZBTB43O43298 467 aa13.01□□□□□ -0.33
TBRG4-217ENST00000495973 DHX16O60231 1041 aaKnown RBP13.01□□□□□ -0.33
TBRG4-217ENST00000495973 NLRP3Q96P20 1036 aa13.01□□□□□ -0.33
TBRG4-217ENST00000495973 SLC12A7Q9Y666 1083 aa13.01□□□□□ -0.33
TBRG4-217ENST00000495973 PLCH1Q4KWH8 1693 aa13.01□□□□□ -0.33
TBRG4-217ENST00000495973 KIF28PB7ZC32 967 aa13.01□□□□□ -0.33
TBRG4-217ENST00000495973 SYNE3Q6ZMZ3 975 aa13.01□□□□□ -0.33
TBRG4-217ENST00000495973 ILDR1Q86SU0 546 aaPredicted RBP13.01□□□□□ -0.33
TBRG4-217ENST00000495973 NACAP1Q9BZK3 213 aa13.01□□□□□ -0.33
TBRG4-217ENST00000495973 MINPP1Q9UNW1 487 aa13.01□□□□□ -0.33
TBRG4-217ENST00000495973 RTCBQ9Y3I0 505 aaKnown RBP13.01□□□□□ -0.33
TBRG4-217ENST00000495973 AP5Z1O43299 807 aa13□□□□□ -0.33
TBRG4-217ENST00000495973 RANBP6O60518 1105 aaKnown RBP13□□□□□ -0.33
TBRG4-217ENST00000495973 DNTTIP2Q5QJE6 756 aaKnown RBP13□□□□□ -0.33
TBRG4-217ENST00000495973 BCL2L12Q9HB09 334 aa13□□□□□ -0.33
TBRG4-217ENST00000495973 LAMA4Q16363 1823 aa13□□□□□ -0.33
TBRG4-217ENST00000495973 RFC4P35249 363 aa13□□□□□ -0.33
TBRG4-217ENST00000495973 APOA5Q6Q788 366 aa13□□□□□ -0.33
TBRG4-217ENST00000495973 ZNF396Q96N95 335 aaPredicted RBP13□□□□□ -0.33
TBRG4-217ENST00000495973 AGXT2Q9BYV1 514 aa13□□□□□ -0.33
TBRG4-217ENST00000495973 GNL3LQ9NVN8 582 aaKnown RBP13□□□□□ -0.33
TBRG4-217ENST00000495973 ANKIB1Q9P2G1 1089 aa13□□□□□ -0.33
TBRG4-217ENST00000495973 BIN1O00499 593 aa13□□□□□ -0.33
TBRG4-217ENST00000495973 NAA16Q6N069 864 aaPredicted RBP13□□□□□ -0.33
TBRG4-217ENST00000495973 ARHGEF1Q92888 912 aaKnown RBP13□□□□□ -0.33
TBRG4-217ENST00000495973 PDLIM2Q96JY6 352 aa13□□□□□ -0.33
TBRG4-217ENST00000495973 SDF4Q9BRK5 362 aa13□□□□□ -0.33
TBRG4-217ENST00000495973 PDCL3Q9H2J4 239 aa13□□□□□ -0.33
TBRG4-217ENST00000495973 AATFQ9NY61 560 aaKnown RBP eCLIP13□□□□□ -0.332e-58■■■■■ 32.8
TBRG4-217ENST00000495973 CCDC39Q9UFE4 941 aa13□□□□□ -0.33
TBRG4-217ENST00000495973 MAGEB6P1A0A0J9YX57 407 aa12.99□□□□□ -0.33
TBRG4-217ENST00000495973 SH2B2O14492 632 aaPredicted RBP12.99□□□□□ -0.33
TBRG4-217ENST00000495973 KINO60870 393 aaKnown RBP12.99□□□□□ -0.33
TBRG4-217ENST00000495973 MRVI1Q9Y6F6 885 aa12.99□□□□□ -0.33
TBRG4-217ENST00000495973 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.99□□□□□ -0.33
TBRG4-217ENST00000495973 COL4A1P02462 1669 aa12.99□□□□□ -0.33
TBRG4-217ENST00000495973 AHDC1Q5TGY3 1603 aaPredicted RBP12.99□□□□□ -0.33
TBRG4-217ENST00000495973 RPS8P62241 208 aaKnown RBP12.99□□□□□ -0.33
TBRG4-217ENST00000495973 FAM196AQ6ZSG2 479 aa12.99□□□□□ -0.33
TBRG4-217ENST00000495973 TXNRD3Q86VQ6 643 aa12.99□□□□□ -0.33
TBRG4-217ENST00000495973 KCNJ14Q9UNX9 436 aa12.99□□□□□ -0.33
TBRG4-217ENST00000495973 IARSP41252 1262 aaKnown RBP12.98□□□□□ -0.33
TBRG4-217ENST00000495973 AKNAD1Q5T1N1 836 aa12.98□□□□□ -0.33
TBRG4-217ENST00000495973 ELP1O95163 1332 aa12.98□□□□□ -0.33
TBRG4-217ENST00000495973 ERICH2A1L162 156 aa12.98□□□□□ -0.33
TBRG4-217ENST00000495973 CPLX2Q6PUV4 134 aaKnown RBP12.98□□□□□ -0.33
TBRG4-217ENST00000495973 UBAC1Q9BSL1 405 aa12.98□□□□□ -0.33
TBRG4-217ENST00000495973 CLSTN2Q9H4D0 955 aa12.98□□□□□ -0.33
TBRG4-217ENST00000495973 PCDHA7Q9UN72 937 aa12.98□□□□□ -0.33
TBRG4-217ENST00000495973 R3HCC1Q9Y3T6 440 aaKnown RBP12.98□□□□□ -0.33
TBRG4-217ENST00000495973 MYH3P11055 1940 aa12.98□□□□□ -0.33
TBRG4-217ENST00000495973 PRDX5P30044 214 aa12.98□□□□□ -0.33
TBRG4-217ENST00000495973 GUCY1A2P33402 732 aa12.98□□□□□ -0.33
TBRG4-217ENST00000495973 VPS72Q15906 364 aa12.98□□□□□ -0.33
TBRG4-217ENST00000495973 SPECC1Q5M775 1068 aa12.98□□□□□ -0.33
TBRG4-217ENST00000495973 FBXO18Q8NFZ0 1043 aa12.98□□□□□ -0.33
TBRG4-217ENST00000495973 FAM84BQ96KN1 310 aaPredicted RBP12.98□□□□□ -0.33
TBRG4-217ENST00000495973 AK7Q96M32 723 aa12.98□□□□□ -0.33
TBRG4-217ENST00000495973 DDX19AQ9NUU7 478 aaKnown RBP12.98□□□□□ -0.33
TBRG4-217ENST00000495973 AKAP11Q9UKA4 1901 aa12.98□□□□□ -0.33
TBRG4-217ENST00000495973 SPEF2Q9C093 1822 aa12.98□□□□□ -0.33
TBRG4-217ENST00000495973 TRIM29Q14134 588 aa12.97□□□□□ -0.33
TBRG4-217ENST00000495973 WTAPQ15007 396 aa12.97□□□□□ -0.33
TBRG4-217ENST00000495973 TPTE2Q6XPS3 522 aa12.97□□□□□ -0.33
TBRG4-217ENST00000495973 ZNF512BQ96KM6 892 aaPredicted RBP12.97□□□□□ -0.33
TBRG4-217ENST00000495973 FUCA2Q9BTY2 467 aa12.97□□□□□ -0.33
TBRG4-217ENST00000495973 TRIM5Q9C035 493 aa12.97□□□□□ -0.33
TBRG4-217ENST00000495973 LY9Q9HBG7 655 aa12.97□□□□□ -0.33
TBRG4-217ENST00000495973 CBX8Q9HC52 389 aa12.97□□□□□ -0.33
TBRG4-217ENST00000495973 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.97□□□□□ -0.33
TBRG4-217ENST00000495973 SALL1Q9NSC2 1324 aa12.97□□□□□ -0.33
TBRG4-217ENST00000495973 ZNF165P49910 485 aa12.97□□□□□ -0.33
TBRG4-217ENST00000495973 KRT40Q6A162 431 aa12.97□□□□□ -0.33
TBRG4-217ENST00000495973 PPARAQ07869 468 aa12.97□□□□□ -0.33
TBRG4-217ENST00000495973 NWD2Q9ULI1 1742 aa12.96□□□□□ -0.33
TBRG4-217ENST00000495973 IGDCC4Q8TDY8 1250 aa12.96□□□□□ -0.33
TBRG4-217ENST00000495973 BSDC1Q9NW68 430 aaPredicted RBP12.96□□□□□ -0.33
TBRG4-217ENST00000495973 ZKSCAN5Q9Y2L8 839 aa12.96□□□□□ -0.33
TBRG4-217ENST00000495973 BAZ2BQ9UIF8 2168 aaKnown RBP12.96□□□□□ -0.33
TBRG4-217ENST00000495973 ZMYM6O95789 1325 aa12.96□□□□□ -0.33
TBRG4-217ENST00000495973 PDIA4P13667 645 aaKnown RBP12.96□□□□□ -0.33
TBRG4-217ENST00000495973 ZRSR1Q15695 479 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms