RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 MBD4O95243 580 aa23.42■■□□□ 1.34
ATG3-208ENST00000495756 SPDYE6P0CI01 402 aa23.42■■□□□ 1.34
ATG3-208ENST00000495756 DYNLL1P63167 89 aaKnown RBP23.42■■□□□ 1.34
ATG3-208ENST00000495756 SAMD7Q7Z3H4 446 aa23.42■■□□□ 1.34
ATG3-208ENST00000495756 ZBED3Q96IU2 234 aaPredicted RBP23.42■■□□□ 1.34
ATG3-208ENST00000495756 PRMT6Q96LA8 375 aaPredicted RBP23.42■■□□□ 1.34
ATG3-208ENST00000495756 WDR90Q96KV7 1748 aa23.42■■□□□ 1.34
ATG3-208ENST00000495756 SGSM2O43147 1006 aa23.41■■□□□ 1.34
ATG3-208ENST00000495756 GPAA1O43292 621 aa23.41■■□□□ 1.34
ATG3-208ENST00000495756 EGFRP00533 1210 aa23.41■■□□□ 1.34
ATG3-208ENST00000495756 TBC1D10BQ4KMP7 808 aaPredicted RBP23.41■■□□□ 1.34
ATG3-208ENST00000495756 CCDC129Q6ZRS4 1044 aa23.41■■□□□ 1.34
ATG3-208ENST00000495756 ZNF589Q86UQ0 364 aaPredicted RBP23.41■■□□□ 1.34
ATG3-208ENST00000495756 CERS3Q8IU89 383 aa23.41■■□□□ 1.34
ATG3-208ENST00000495756 LCORLQ8N3X6 602 aa23.41■■□□□ 1.34
ATG3-208ENST00000495756 ARMT1Q9H993 441 aa23.41■■□□□ 1.34
ATG3-208ENST00000495756 KIF4BQ2VIQ3 1234 aa23.4■■□□□ 1.34
ATG3-208ENST00000495756 C8orf34Q49A92 452 aa23.4■■□□□ 1.34
ATG3-208ENST00000495756 RBM26Q5T8P6 1007 aaKnown RBP23.4■■□□□ 1.34
ATG3-208ENST00000495756 STRBPQ96SI9 672 aaKnown RBP23.4■■□□□ 1.34
ATG3-208ENST00000495756 HACL1Q9UJ83 578 aa23.4■■□□□ 1.34
ATG3-208ENST00000495756 CCDC171Q6TFL3 1326 aa23.4■■□□□ 1.34
ATG3-208ENST00000495756 SCN4AP35499 1836 aa23.4■■□□□ 1.34
ATG3-208ENST00000495756 PLCG2P16885 1265 aa23.39■■□□□ 1.34
ATG3-208ENST00000495756 RHBDL3P58872 404 aa23.39■■□□□ 1.34
ATG3-208ENST00000495756 CDC42EP5Q6NZY7 148 aa23.39■■□□□ 1.34
ATG3-208ENST00000495756 SH3RF3Q8TEJ3 882 aaPredicted RBP23.39■■□□□ 1.34
ATG3-208ENST00000495756 ADARB2Q9NS39 739 aaKnown RBP23.39■■□□□ 1.34
ATG3-208ENST00000495756 IQCA1LA6NCM1 817 aa23.38■■□□□ 1.33
ATG3-208ENST00000495756 WNT10BO00744 389 aa23.38■■□□□ 1.33
ATG3-208ENST00000495756 MFAP1P55081 439 aaKnown RBP23.38■■□□□ 1.33
ATG3-208ENST00000495756 USP40Q9NVE5 1235 aa23.38■■□□□ 1.33
ATG3-208ENST00000495756 POTECB2RU33 542 aa23.37■■□□□ 1.33
ATG3-208ENST00000495756 NBPF9Q3BBW0 867 aa23.37■■□□□ 1.33
ATG3-208ENST00000495756 TRPM4Q8TD43 1214 aa23.37■■□□□ 1.33
ATG3-208ENST00000495756 TDRD3Q9H7E2 651 aaKnown RBP23.37■■□□□ 1.33
ATG3-208ENST00000495756 CRNKL1Q9BZJ0 848 aaKnown RBP23.36■■□□□ 1.33
ATG3-208ENST00000495756 MYO1BO43795 1136 aa23.36■■□□□ 1.33
ATG3-208ENST00000495756 EPHX2P34913 555 aa23.36■■□□□ 1.33
ATG3-208ENST00000495756 TEX11Q8IYF3 940 aa23.36■■□□□ 1.33
ATG3-208ENST00000495756 ECM29Q5VYK3 1845 aa23.35■■□□□ 1.33
ATG3-208ENST00000495756 PRKAB2O43741 272 aa23.35■■□□□ 1.33
ATG3-208ENST00000495756 GNAT2P19087 354 aa23.35■■□□□ 1.33
ATG3-208ENST00000495756 HIRAP54198 1017 aaPredicted RBP23.35■■□□□ 1.33
ATG3-208ENST00000495756 SPDYE2Q495Y8 402 aa23.35■■□□□ 1.33
ATG3-208ENST00000495756 VPS53Q5VIR6 699 aa23.35■■□□□ 1.33
ATG3-208ENST00000495756 TAF1DQ9H5J8 278 aaPredicted RBP23.35■■□□□ 1.33
ATG3-208ENST00000495756 SLC4A4Q9Y6R1 1079 aa23.35■■□□□ 1.33
ATG3-208ENST00000495756 ZNF70Q9UC06 446 aaPredicted RBP23.34■■□□□ 1.33
ATG3-208ENST00000495756 CDK5RAP2Q96SN8 1893 aa23.34■■□□□ 1.33
ATG3-208ENST00000495756 CLRN2A0PK11 232 aa23.33■■□□□ 1.33
ATG3-208ENST00000495756 WDHD1O75717 1129 aaPredicted RBP23.33■■□□□ 1.33
ATG3-208ENST00000495756 KIAA1211Q6ZU35 1233 aa23.33■■□□□ 1.33
ATG3-208ENST00000495756 USP50Q70EL3 339 aaPredicted RBP23.33■■□□□ 1.33
ATG3-208ENST00000495756 ZNF526Q8TF50 670 aaPredicted RBP23.33■■□□□ 1.33
ATG3-208ENST00000495756 SDR42E1Q8WUS8 393 aa23.33■■□□□ 1.33
ATG3-208ENST00000495756 RRAGCQ9HB90 399 aa23.33■■□□□ 1.33
ATG3-208ENST00000495756 GSG1L2A8MUP6 293 aa23.32■■□□□ 1.32
ATG3-208ENST00000495756 PATL2C9JE40 543 aaKnown RBP23.32■■□□□ 1.32
ATG3-208ENST00000495756 FOXP2O15409 715 aa23.32■■□□□ 1.32
ATG3-208ENST00000495756 HSPD1P10809 573 aaKnown RBP23.32■■□□□ 1.32
ATG3-208ENST00000495756 VEGFAP15692 232 aaPredicted RBP23.32■■□□□ 1.32
ATG3-208ENST00000495756 CACNB3P54284 484 aa23.32■■□□□ 1.32
ATG3-208ENST00000495756 TGFBRAP1Q8WUH2 860 aa23.32■■□□□ 1.32
ATG3-208ENST00000495756 IDI2Q9BXS1 227 aa23.32■■□□□ 1.32
ATG3-208ENST00000495756 ANO2Q9NQ90 1003 aa23.32■■□□□ 1.32
ATG3-208ENST00000495756 TMOD2Q9NZR1 351 aa23.32■■□□□ 1.32
ATG3-208ENST00000495756 FOCADQ5VW36 1801 aa23.32■■□□□ 1.32
ATG3-208ENST00000495756 ASTN2O75129 1339 aaPredicted RBP23.32■■□□□ 1.32
ATG3-208ENST00000495756 REC8O95072 547 aa23.31■■□□□ 1.32
ATG3-208ENST00000495756 APPP05067 770 aa23.31■■□□□ 1.32
ATG3-208ENST00000495756 USP5P45974 858 aa23.31■■□□□ 1.32
ATG3-208ENST00000495756 NFIAQ12857 509 aa23.31■■□□□ 1.32
ATG3-208ENST00000495756 LSG1Q9H089 658 aaKnown RBP23.31■■□□□ 1.32
ATG3-208ENST00000495756 ATP8A2Q9NTI2 1148 aa23.31■■□□□ 1.32
ATG3-208ENST00000495756 RPAP1Q9BWH6 1393 aaPredicted RBP23.31■■□□□ 1.32
ATG3-208ENST00000495756 PTH1RQ03431 593 aa23.3■■□□□ 1.32
ATG3-208ENST00000495756 FKBP1CQ5VVH2 108 aa23.3■■□□□ 1.32
ATG3-208ENST00000495756 PNMA8AQ86V59 439 aaPredicted RBP23.3■■□□□ 1.32
ATG3-208ENST00000495756 DSCC1Q9BVC3 393 aa23.3■■□□□ 1.32
ATG3-208ENST00000495756 VEZTQ9HBM0 779 aa23.3■■□□□ 1.32
ATG3-208ENST00000495756 NMRK2Q9NPI5 230 aa23.3■■□□□ 1.32
ATG3-208ENST00000495756 FLT1P17948 1338 aa23.3■■□□□ 1.32
ATG3-208ENST00000495756 EIF5BO60841 1220 aaKnown RBP23.3■■□□□ 1.32
ATG3-208ENST00000495756 SEC24BO95487 1268 aa23.3■■□□□ 1.32
ATG3-208ENST00000495756 YY1P25490 414 aa23.3■■□□□ 1.32
ATG3-208ENST00000495756 GIMAP6Q6P9H5 292 aa23.3■■□□□ 1.32
ATG3-208ENST00000495756 MAPKAPK5Q8IW41 473 aa23.3■■□□□ 1.32
ATG3-208ENST00000495756 EPB41L4AQ9HCS5 686 aaPredicted RBP23.3■■□□□ 1.32
ATG3-208ENST00000495756 DCP1AQ9NPI6 582 aaPredicted RBP23.3■■□□□ 1.32
ATG3-208ENST00000495756 DDX4Q9NQI0 724 aaKnown RBP23.3■■□□□ 1.32
ATG3-208ENST00000495756 FAM198AQ9UFP1 575 aa23.3■■□□□ 1.32
ATG3-208ENST00000495756 MKRN1Q9UHC7 482 aaKnown RBP23.3■■□□□ 1.32
ATG3-208ENST00000495756 NPM3O75607 178 aaKnown RBP23.29■■□□□ 1.32
ATG3-208ENST00000495756 PICALMQ13492 652 aa23.29■■□□□ 1.32
ATG3-208ENST00000495756 ANGEL2Q5VTE6 544 aaKnown RBP23.29■■□□□ 1.32
ATG3-208ENST00000495756 IFNL3Q8IZI9 196 aa23.29■■□□□ 1.32
ATG3-208ENST00000495756 BACH2Q9BYV9 841 aa23.29■■□□□ 1.32
ATG3-208ENST00000495756 NACAP1Q9BZK3 213 aa23.29■■□□□ 1.32
ATG3-208ENST00000495756 TCP10L2B9ZVM9 353 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms