RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 MYO1BO43795 1136 aa11.73□□□□□ -0.53
GARNL3-219ENST00000495172 CACNB3P54284 484 aa11.73□□□□□ -0.53
GARNL3-219ENST00000495172 PPIL2Q13356 520 aa11.73□□□□□ -0.53
GARNL3-219ENST00000495172 PDE3AQ14432 1141 aa11.73□□□□□ -0.53
GARNL3-219ENST00000495172 AK9Q5TCS8 1911 aa11.73□□□□□ -0.53
GARNL3-219ENST00000495172 MAST2Q6P0Q8 1798 aa11.73□□□□□ -0.53
GARNL3-219ENST00000495172 ANKRD18AQ8IVF6 992 aa11.73□□□□□ -0.53
GARNL3-219ENST00000495172 OGDHLQ9ULD0 1010 aa11.73□□□□□ -0.53
GARNL3-219ENST00000495172 COL6A1P12109 1028 aa11.72□□□□□ -0.53
GARNL3-219ENST00000495172 MRPS5P82675 430 aaKnown RBP11.72□□□□□ -0.53
GARNL3-219ENST00000495172 TFF2Q03403 129 aa11.72□□□□□ -0.53
GARNL3-219ENST00000495172 KRT24Q2M2I5 525 aa11.72□□□□□ -0.53
GARNL3-219ENST00000495172 TMEM31Q5JXX7 168 aa11.72□□□□□ -0.53
GARNL3-219ENST00000495172 GPAT2Q6NUI2 795 aa11.72□□□□□ -0.53
GARNL3-219ENST00000495172 CACNA1GO43497 2377 aa11.71□□□□□ -0.53
GARNL3-219ENST00000495172 INPP5BP32019 993 aa11.71□□□□□ -0.53
GARNL3-219ENST00000495172 ATN1P54259 1190 aaPredicted RBP11.71□□□□□ -0.53
GARNL3-219ENST00000495172 SMAD3P84022 425 aaKnown RBP11.71□□□□□ -0.53
GARNL3-219ENST00000495172 IRF5Q13568 498 aa11.71□□□□□ -0.53
GARNL3-219ENST00000495172 SPDYE2Q495Y8 402 aa11.71□□□□□ -0.53
GARNL3-219ENST00000495172 U2AF1L5P0DN76 240 aaPredicted RBP11.7□□□□□ -0.54
GARNL3-219ENST00000495172 KCNQ1P51787 676 aa11.7□□□□□ -0.54
GARNL3-219ENST00000495172 U2AF1Q01081 240 aaKnown RBP eCLIP11.7□□□□□ -0.54
GARNL3-219ENST00000495172 HMX1Q9NP08 348 aaPredicted RBP11.7□□□□□ -0.54
GARNL3-219ENST00000495172 BMP1P13497 986 aa11.69□□□□□ -0.54
GARNL3-219ENST00000495172 CCDC152Q4G0S7 254 aa11.69□□□□□ -0.54
GARNL3-219ENST00000495172 MIGA2Q7L4E1 593 aa11.69□□□□□ -0.54
GARNL3-219ENST00000495172 IL27Q8NEV9 243 aa11.69□□□□□ -0.54
GARNL3-219ENST00000495172 CD209Q9NNX6 404 aa11.69□□□□□ -0.54
GARNL3-219ENST00000495172 CHPF2Q9P2E5 772 aa11.69□□□□□ -0.54
GARNL3-219ENST00000495172 C5orf42Q9H799 3197 aa11.69□□□□□ -0.54
GARNL3-219ENST00000495172 ZDBF2Q9HCK1 2354 aa11.68□□□□□ -0.54
GARNL3-219ENST00000495172 PLXNB2O15031 1838 aa11.68□□□□□ -0.54
GARNL3-219ENST00000495172 HTATSF1O43719 755 aaKnown RBP11.68□□□□□ -0.54
GARNL3-219ENST00000495172 HMGCRP04035 888 aa11.68□□□□□ -0.54
GARNL3-219ENST00000495172 EPHB4P54760 987 aa11.68□□□□□ -0.54
GARNL3-219ENST00000495172 ADGRE1Q14246 886 aa11.68□□□□□ -0.54
GARNL3-219ENST00000495172 PNISRQ8TF01 805 aaKnown RBP11.68□□□□□ -0.54
GARNL3-219ENST00000495172 BADQ92934 168 aa11.68□□□□□ -0.54
GARNL3-219ENST00000495172 PARK7Q99497 189 aaKnown RBP11.68□□□□□ -0.54
GARNL3-219ENST00000495172 PRDM12Q9H4Q4 367 aa11.68□□□□□ -0.54
GARNL3-219ENST00000495172 SPTBN4Q9H254 2564 aa11.68□□□□□ -0.54
GARNL3-219ENST00000495172 MMP14P50281 582 aa11.67□□□□□ -0.54
GARNL3-219ENST00000495172 PLBD2Q8NHP8 589 aa11.67□□□□□ -0.54
GARNL3-219ENST00000495172 TRIB2Q92519 343 aa11.67□□□□□ -0.54
GARNL3-219ENST00000495172 PHOX2BQ99453 314 aa11.67□□□□□ -0.54
GARNL3-219ENST00000495172 SENP6Q9GZR1 1112 aaPredicted RBP11.67□□□□□ -0.54
GARNL3-219ENST00000495172 TSPYL4Q9UJ04 414 aa11.67□□□□□ -0.54
GARNL3-219ENST00000495172 FRMPD3Q5JV73 1810 aa11.66□□□□□ -0.54
GARNL3-219ENST00000495172 DNAJB2P25686 324 aa11.66□□□□□ -0.54
GARNL3-219ENST00000495172 CCND3P30281 292 aaPredicted RBP11.66□□□□□ -0.54
GARNL3-219ENST00000495172 NHLH1Q02575 133 aa11.66□□□□□ -0.54
GARNL3-219ENST00000495172 RIC3Q7Z5B4 369 aa11.66□□□□□ -0.54
GARNL3-219ENST00000495172 ANKRD13CQ8N6S4 541 aa11.66□□□□□ -0.54
GARNL3-219ENST00000495172 ZNF576Q9H609 170 aa11.66□□□□□ -0.54
GARNL3-219ENST00000495172 GREM2Q9H772 168 aa11.66□□□□□ -0.54
GARNL3-219ENST00000495172 PRDM5Q9NQX1 630 aaPredicted RBP11.66□□□□□ -0.54
GARNL3-219ENST00000495172 PDE8AO60658 829 aa11.65□□□□□ -0.54
GARNL3-219ENST00000495172 HSPA5P11021 654 aaKnown RBP11.65□□□□□ -0.54
GARNL3-219ENST00000495172 PRKAR2AP13861 404 aaKnown RBP11.65□□□□□ -0.54
GARNL3-219ENST00000495172 CAPN2P17655 700 aa11.65□□□□□ -0.54
GARNL3-219ENST00000495172 PPATQ06203 517 aa11.65□□□□□ -0.54
GARNL3-219ENST00000495172 TNFAIP1Q13829 316 aa11.65□□□□□ -0.54
GARNL3-219ENST00000495172 GRIK5Q16478 980 aa11.65□□□□□ -0.54
GARNL3-219ENST00000495172 SH3RF1Q7Z6J0 888 aa11.65□□□□□ -0.54
GARNL3-219ENST00000495172 DZIP1LQ8IYY4 767 aaKnown RBP11.65□□□□□ -0.54
GARNL3-219ENST00000495172 ANKS1AQ92625 1134 aa11.65□□□□□ -0.54
GARNL3-219ENST00000495172 BSDC1Q9NW68 430 aaPredicted RBP11.65□□□□□ -0.54
GARNL3-219ENST00000495172 KCNH4Q9UQ05 1017 aa11.65□□□□□ -0.54
GARNL3-219ENST00000495172 PLXNA1Q9UIW2 1896 aa11.64□□□□□ -0.55
GARNL3-219ENST00000495172 PEX10O60683 326 aa11.64□□□□□ -0.55
GARNL3-219ENST00000495172 IGFBP4P22692 258 aa11.64□□□□□ -0.55
GARNL3-219ENST00000495172 PBX2P40425 430 aa11.64□□□□□ -0.55
GARNL3-219ENST00000495172 RTP1P59025 263 aa11.64□□□□□ -0.55
GARNL3-219ENST00000495172 LHX8Q68G74 356 aa11.64□□□□□ -0.55
GARNL3-219ENST00000495172 GADL1Q6ZQY3 521 aa11.64□□□□□ -0.55
GARNL3-219ENST00000495172 COA7Q96BR5 231 aa11.64□□□□□ -0.55
GARNL3-219ENST00000495172 ATP11BQ9Y2G3 1177 aa11.64□□□□□ -0.55
GARNL3-219ENST00000495172 GRXCR1A8MXD5 290 aa11.63□□□□□ -0.55
GARNL3-219ENST00000495172 TAF5LO75529 589 aa11.63□□□□□ -0.55
GARNL3-219ENST00000495172 CYP2B6P20813 491 aa11.63□□□□□ -0.55
GARNL3-219ENST00000495172 ITGB8P26012 769 aa11.63□□□□□ -0.55
GARNL3-219ENST00000495172 MICALL1Q8N3F8 863 aa11.63□□□□□ -0.55
GARNL3-219ENST00000495172 RNPC3Q96LT9 517 aaKnown RBP11.63□□□□□ -0.55
GARNL3-219ENST00000495172 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.63□□□□□ -0.55
GARNL3-219ENST00000495172 GJD2Q9UKL4 321 aa11.63□□□□□ -0.55
GARNL3-219ENST00000495172 TTF2Q9UNY4 1162 aaKnown RBP11.63□□□□□ -0.55
GARNL3-219ENST00000495172 LEMD3Q9Y2U8 911 aa11.63□□□□□ -0.55
GARNL3-219ENST00000495172 SMIM22K7EJ46 135 aa11.62□□□□□ -0.55
GARNL3-219ENST00000495172 GPR37L1O60883 481 aa11.62□□□□□ -0.55
GARNL3-219ENST00000495172 MAP3K21Q5TCX8 1036 aa11.62□□□□□ -0.55
GARNL3-219ENST00000495172 GAS2L1Q99501 681 aaPredicted RBP11.62□□□□□ -0.55
GARNL3-219ENST00000495172 MYD88Q99836 296 aa11.62□□□□□ -0.55
GARNL3-219ENST00000495172 PRKAG2Q9UGJ0 569 aa11.62□□□□□ -0.55
GARNL3-219ENST00000495172 TRIM43BA6NCK2 446 aa11.61□□□□□ -0.55
GARNL3-219ENST00000495172 SLURP2P0DP57 97 aa11.61□□□□□ -0.55
GARNL3-219ENST00000495172 CRKP46108 304 aa11.61□□□□□ -0.55
GARNL3-219ENST00000495172 CTSWP56202 376 aa11.61□□□□□ -0.55
GARNL3-219ENST00000495172 CACNB2Q08289 660 aaPredicted RBP11.61□□□□□ -0.55
GARNL3-219ENST00000495172 CCL14Q16627 93 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms