RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 TRERF1Q96PN7 1200 aa17.7■□□□□ 0.42
SDF4-207ENST00000494748 PARD6BQ9BYG5 372 aa17.7■□□□□ 0.42
SDF4-207ENST00000494748 FER1L4A9Z1Z3 1794 aa17.7■□□□□ 0.42
SDF4-207ENST00000494748 PPP6R2O75170 966 aa17.69■□□□□ 0.42
SDF4-207ENST00000494748 C19orf44Q9H6X5 657 aa17.69■□□□□ 0.42
SDF4-207ENST00000494748 CPDO75976 1380 aa17.69■□□□□ 0.42
SDF4-207ENST00000494748 ZSCAN12O43309 604 aa17.69■□□□□ 0.42
SDF4-207ENST00000494748 HAND2P61296 217 aa17.69■□□□□ 0.42
SDF4-207ENST00000494748 PPP2R3AQ06190 1150 aa17.69■□□□□ 0.42
SDF4-207ENST00000494748 TXLNBQ8N3L3 684 aa17.69■□□□□ 0.42
SDF4-207ENST00000494748 NEUROD6Q96NK8 337 aa17.69■□□□□ 0.42
SDF4-207ENST00000494748 NBPF3Q9H094 633 aa17.69■□□□□ 0.42
SDF4-207ENST00000494748 H3BQF6 201 aa17.69■□□□□ 0.42
SDF4-207ENST00000494748 MYO1BO43795 1136 aa17.69■□□□□ 0.42
SDF4-207ENST00000494748 TOP1P11387 765 aaKnown RBP17.69■□□□□ 0.42
SDF4-207ENST00000494748 H7C1W4 665 aa17.68■□□□□ 0.42
SDF4-207ENST00000494748 ZNF18P17022 549 aa17.68■□□□□ 0.42
SDF4-207ENST00000494748 LONRF3Q496Y0 759 aa17.68■□□□□ 0.42
SDF4-207ENST00000494748 CCDC34Q96HJ3 373 aa17.68■□□□□ 0.42
SDF4-207ENST00000494748 LRRC24Q50LG9 513 aa17.68■□□□□ 0.42
SDF4-207ENST00000494748 TEX35Q5T0J7 233 aa17.68■□□□□ 0.42
SDF4-207ENST00000494748 SYNE3Q6ZMZ3 975 aa17.68■□□□□ 0.42
SDF4-207ENST00000494748 CLIC6Q96NY7 704 aa17.68■□□□□ 0.42
SDF4-207ENST00000494748 MED15Q96RN5 788 aa17.68■□□□□ 0.42
SDF4-207ENST00000494748 MAP2K7O14733 419 aa17.68■□□□□ 0.42
SDF4-207ENST00000494748 FOXN1O15353 648 aa17.68■□□□□ 0.42
SDF4-207ENST00000494748 FGAP02671 866 aa17.68■□□□□ 0.42
SDF4-207ENST00000494748 FAM177A1Q8N128 213 aaPredicted RBP17.68■□□□□ 0.42
SDF4-207ENST00000494748 RABGGTAQ92696 567 aa17.67■□□□□ 0.42
SDF4-207ENST00000494748 DHX58Q96C10 678 aa17.67■□□□□ 0.42
SDF4-207ENST00000494748 BAG1Q99933 345 aaPredicted RBP17.67■□□□□ 0.42
SDF4-207ENST00000494748 DENND2AQ9ULE3 1009 aa17.67■□□□□ 0.42
SDF4-207ENST00000494748 CASQ1P31415 396 aa17.67■□□□□ 0.42
SDF4-207ENST00000494748 VPS37DQ86XT2 251 aa17.67■□□□□ 0.42
SDF4-207ENST00000494748 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.67■□□□□ 0.42
SDF4-207ENST00000494748 CHD4Q14839 1912 aa17.67■□□□□ 0.42
SDF4-207ENST00000494748 STX10O60499 249 aa17.67■□□□□ 0.42
SDF4-207ENST00000494748 IFIT1P09914 478 aaKnown RBP17.67■□□□□ 0.42
SDF4-207ENST00000494748 GYS2P54840 703 aa17.67■□□□□ 0.42
SDF4-207ENST00000494748 GNG11P61952 73 aa17.67■□□□□ 0.42
SDF4-207ENST00000494748 KRBA2Q6ZNG9 492 aa17.67■□□□□ 0.42
SDF4-207ENST00000494748 PCDHA5Q9Y5H7 936 aa17.67■□□□□ 0.42
SDF4-207ENST00000494748 MEGF6O75095 1541 aa17.66■□□□□ 0.42
SDF4-207ENST00000494748 FMR1Q06787 632 aaKnown RBP eCLIP17.66■□□□□ 0.42
SDF4-207ENST00000494748 MRPL44Q9H9J2 332 aaKnown RBP17.66■□□□□ 0.42
SDF4-207ENST00000494748 ATG3Q9NT62 314 aa17.66■□□□□ 0.42
SDF4-207ENST00000494748 WDR19Q8NEZ3 1342 aa17.66■□□□□ 0.42
SDF4-207ENST00000494748 DHX16O60231 1041 aaKnown RBP17.66■□□□□ 0.42
SDF4-207ENST00000494748 A0A1B0GUL7 405 aa17.65■□□□□ 0.42
SDF4-207ENST00000494748 RBM33Q96EV2 1170 aaKnown RBP17.65■□□□□ 0.42
SDF4-207ENST00000494748 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.65■□□□□ 0.42
SDF4-207ENST00000494748 LCMT1Q9UIC8 334 aa17.65■□□□□ 0.42
SDF4-207ENST00000494748 UBR2Q8IWV8 1755 aa17.65■□□□□ 0.42
SDF4-207ENST00000494748 PHKG2P15735 406 aa17.65■□□□□ 0.42
SDF4-207ENST00000494748 ADKP55263 362 aaKnown RBP17.65■□□□□ 0.42
SDF4-207ENST00000494748 PSD3Q9NYI0 1048 aa17.65■□□□□ 0.42
SDF4-207ENST00000494748 COL18A1P39060 1754 aa17.65■□□□□ 0.42
SDF4-207ENST00000494748 PLBD2Q8NHP8 589 aa17.65■□□□□ 0.42
SDF4-207ENST00000494748 ZNF594Q96JF6 807 aaPredicted RBP17.65■□□□□ 0.42
SDF4-207ENST00000494748 ARFGAP3Q9NP61 516 aa17.65■□□□□ 0.42
SDF4-207ENST00000494748 MYH8P13535 1937 aa17.65■□□□□ 0.42
SDF4-207ENST00000494748 IL15P40933 162 aaPredicted RBP17.64■□□□□ 0.42
SDF4-207ENST00000494748 ANKZF1Q9H8Y5 726 aa17.64■□□□□ 0.42
SDF4-207ENST00000494748 ZMYM6O95789 1325 aa17.64■□□□□ 0.41
SDF4-207ENST00000494748 A0A0U1RQJ8 604 aa17.64■□□□□ 0.41
SDF4-207ENST00000494748 GOLGA6L9A6NEM1 432 aa17.64■□□□□ 0.41
SDF4-207ENST00000494748 SNRPA1P09661 255 aaKnown RBP17.64■□□□□ 0.41
SDF4-207ENST00000494748 MTF1Q14872 753 aa17.64■□□□□ 0.41
SDF4-207ENST00000494748 IMMTQ16891 758 aaKnown RBP17.64■□□□□ 0.41
SDF4-207ENST00000494748 LONRF2Q1L5Z9 754 aa17.64■□□□□ 0.41
SDF4-207ENST00000494748 KRT40Q6A162 431 aa17.64■□□□□ 0.41
SDF4-207ENST00000494748 THEMISQ8N1K5 641 aaPredicted RBP17.64■□□□□ 0.41
SDF4-207ENST00000494748 ATRIPQ8WXE1 791 aa17.64■□□□□ 0.41
SDF4-207ENST00000494748 TEX13AQ9BXU3 409 aaPredicted RBP17.64■□□□□ 0.41
SDF4-207ENST00000494748 IRX2Q9BZI1 471 aaPredicted RBP17.64■□□□□ 0.41
SDF4-207ENST00000494748 PUS7LQ9H0K6 701 aaKnown RBP17.64■□□□□ 0.41
SDF4-207ENST00000494748 TXLNAP40222 546 aa17.64■□□□□ 0.41
SDF4-207ENST00000494748 ELOA2Q8IYF1 753 aaPredicted RBP17.64■□□□□ 0.41
SDF4-207ENST00000494748 DESI2Q9BSY9 194 aa17.64■□□□□ 0.41
SDF4-207ENST00000494748 EYA2O00167 538 aa17.63■□□□□ 0.41
SDF4-207ENST00000494748 CDK11BP21127 795 aaKnown RBP17.63■□□□□ 0.41
SDF4-207ENST00000494748 ZSCAN26Q16670 478 aa17.63■□□□□ 0.41
SDF4-207ENST00000494748 HSP90AA4PQ58FG1 418 aa17.63■□□□□ 0.41
SDF4-207ENST00000494748 NT5DC1Q5TFE4 455 aa17.63■□□□□ 0.41
SDF4-207ENST00000494748 PUS3Q9BZE2 481 aaKnown RBP17.63■□□□□ 0.41
SDF4-207ENST00000494748 ADAM21Q9UKJ8 722 aa17.63■□□□□ 0.41
SDF4-207ENST00000494748 MAN1B1Q9UKM7 699 aa17.63■□□□□ 0.41
SDF4-207ENST00000494748 LRP6O75581 1613 aa17.63■□□□□ 0.41
SDF4-207ENST00000494748 SCARF1Q14162 830 aa17.63■□□□□ 0.41
SDF4-207ENST00000494748 ESCO1Q5FWF5 840 aa17.63■□□□□ 0.41
SDF4-207ENST00000494748 SPECC1LQ69YQ0 1117 aa17.63■□□□□ 0.41
SDF4-207ENST00000494748 EXOC4Q96A65 974 aa17.63■□□□□ 0.41
SDF4-207ENST00000494748 ALG1Q9BT22 464 aa17.63■□□□□ 0.41
SDF4-207ENST00000494748 TSPYL1Q9H0U9 437 aa17.63■□□□□ 0.41
SDF4-207ENST00000494748 SENP2Q9HC62 589 aa17.63■□□□□ 0.41
SDF4-207ENST00000494748 ALS2Q96Q42 1657 aa17.63■□□□□ 0.41
SDF4-207ENST00000494748 SARSP49591 514 aaKnown RBP17.63■□□□□ 0.41
SDF4-207ENST00000494748 APTXQ7Z2E3 356 aaKnown RBP17.63■□□□□ 0.41
SDF4-207ENST00000494748 NCOA7Q8NI08 942 aa17.63■□□□□ 0.41
SDF4-207ENST00000494748 MAP3K15Q6ZN16 1313 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms