RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 MROH7-TTC4A0A0A0MT08 1334 aa13.52□□□□□ -0.25
APTX-230ENST00000494649 PASKQ96RG2 1323 aa13.52□□□□□ -0.25
APTX-230ENST00000494649 SALL3Q9BXA9 1300 aa13.52□□□□□ -0.25
APTX-230ENST00000494649 PDE4AP27815 886 aa13.51□□□□□ -0.25
APTX-230ENST00000494649 PDE1AP54750 535 aa13.51□□□□□ -0.25
APTX-230ENST00000494649 HDLBPQ00341 1268 aaKnown RBP13.51□□□□□ -0.25
APTX-230ENST00000494649 PICALMQ13492 652 aa13.51□□□□□ -0.25
APTX-230ENST00000494649 SLC9C2Q5TAH2 1124 aa13.51□□□□□ -0.25
APTX-230ENST00000494649 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.51□□□□□ -0.25
APTX-230ENST00000494649 CDCA5Q96FF9 252 aa13.51□□□□□ -0.25
APTX-230ENST00000494649 TMEM39BQ9GZU3 492 aa13.51□□□□□ -0.25
APTX-230ENST00000494649 HSPA6P17066 643 aa13.51□□□□□ -0.25
APTX-230ENST00000494649 DYNLL1P63167 89 aaKnown RBP13.51□□□□□ -0.25
APTX-230ENST00000494649 MAP3K12Q12852 859 aa13.51□□□□□ -0.25
APTX-230ENST00000494649 RASA3Q14644 834 aa13.51□□□□□ -0.25
APTX-230ENST00000494649 CST9Q5W186 159 aa13.51□□□□□ -0.25
APTX-230ENST00000494649 ERC2O15083 957 aa13.5□□□□□ -0.25
APTX-230ENST00000494649 TTF1Q15361 905 aaPredicted RBP13.5□□□□□ -0.25
APTX-230ENST00000494649 MOB2Q70IA6 237 aa13.5□□□□□ -0.25
APTX-230ENST00000494649 PLEKHM2Q8IWE5 1019 aa13.5□□□□□ -0.25
APTX-230ENST00000494649 GAKO14976 1311 aa13.5□□□□□ -0.25
APTX-230ENST00000494649 TTC41PQ6P2S7 1318 aa13.5□□□□□ -0.25
APTX-230ENST00000494649 ZBTB22O15209 634 aa13.49□□□□□ -0.25
APTX-230ENST00000494649 GLRX3O76003 335 aaKnown RBP13.49□□□□□ -0.25
APTX-230ENST00000494649 PDE6AP16499 860 aa13.49□□□□□ -0.25
APTX-230ENST00000494649 MMP14P50281 582 aa13.49□□□□□ -0.25
APTX-230ENST00000494649 APLP1P51693 650 aa13.49□□□□□ -0.25
APTX-230ENST00000494649 GSTO1P78417 241 aa13.49□□□□□ -0.25
APTX-230ENST00000494649 SLC4A8Q2Y0W8 1093 aa13.49□□□□□ -0.25
APTX-230ENST00000494649 APOBEC3FQ8IUX4 373 aaKnown RBP13.49□□□□□ -0.25
APTX-230ENST00000494649 SLF2Q8IX21 1173 aa13.49□□□□□ -0.25
APTX-230ENST00000494649 SH3RF3Q8TEJ3 882 aaPredicted RBP13.49□□□□□ -0.25
APTX-230ENST00000494649 TMOD2Q9NZR1 351 aa13.49□□□□□ -0.25
APTX-230ENST00000494649 PITPNM2Q9BZ72 1349 aa13.49□□□□□ -0.25
APTX-230ENST00000494649 ZNF532Q9HCE3 1301 aa13.49□□□□□ -0.25
APTX-230ENST00000494649 GRM1Q13255 1194 aa13.49□□□□□ -0.25
APTX-230ENST00000494649 NBPF12Q5TAG4 269 aaPredicted RBP13.49□□□□□ -0.25
APTX-230ENST00000494649 ZFPM1Q8IX07 1006 aa13.49□□□□□ -0.25
APTX-230ENST00000494649 MRIQ9BWK5 157 aa13.49□□□□□ -0.25
APTX-230ENST00000494649 ABT1Q9ULW3 272 aaKnown RBP13.49□□□□□ -0.25
APTX-230ENST00000494649 GPR75-ASB3A0A0A6YYF3 556 aa13.48□□□□□ -0.25
APTX-230ENST00000494649 SLURP2P0DP57 97 aa13.48□□□□□ -0.25
APTX-230ENST00000494649 DDX4Q9NQI0 724 aaKnown RBP13.48□□□□□ -0.25
APTX-230ENST00000494649 TRIM6-TRIM34B2RNG4 842 aa13.48□□□□□ -0.25
APTX-230ENST00000494649 LDHCP07864 332 aa13.48□□□□□ -0.25
APTX-230ENST00000494649 RHBDL3P58872 404 aa13.48□□□□□ -0.25
APTX-230ENST00000494649 CNTNAP1P78357 1384 aa13.48□□□□□ -0.25
APTX-230ENST00000494649 TTLL12Q14166 644 aaPredicted RBP13.48□□□□□ -0.25
APTX-230ENST00000494649 ECM29Q5VYK3 1845 aa13.48□□□□□ -0.25
APTX-230ENST00000494649 RILPL2Q969X0 211 aa13.48□□□□□ -0.25
APTX-230ENST00000494649 NOL10Q9BSC4 688 aaKnown RBP13.48□□□□□ -0.25
APTX-230ENST00000494649 FSD1Q9BTV5 496 aa13.48□□□□□ -0.25
APTX-230ENST00000494649 FAM198AQ9UFP1 575 aa13.48□□□□□ -0.25
APTX-230ENST00000494649 DOCK2Q92608 1830 aa13.47□□□□□ -0.25
APTX-230ENST00000494649 TMEM88BA6NKF7 163 aa13.47□□□□□ -0.25
APTX-230ENST00000494649 WDHD1O75717 1129 aaPredicted RBP13.47□□□□□ -0.25
APTX-230ENST00000494649 RGS3P49796 1198 aa13.47□□□□□ -0.25
APTX-230ENST00000494649 PAXIP1Q6ZW49 1069 aaPredicted RBP13.47□□□□□ -0.25
APTX-230ENST00000494649 FAM163AQ96GL9 167 aaPredicted RBP13.47□□□□□ -0.25
APTX-230ENST00000494649 STAP2Q9UGK3 403 aa13.47□□□□□ -0.25
APTX-230ENST00000494649 MKRN1Q9UHC7 482 aaKnown RBP13.47□□□□□ -0.25
APTX-230ENST00000494649 MAST2Q6P0Q8 1798 aa13.47□□□□□ -0.25
APTX-230ENST00000494649 ADD2P35612 726 aa13.46□□□□□ -0.25
APTX-230ENST00000494649 TNFAIP1Q13829 316 aa13.46□□□□□ -0.25
APTX-230ENST00000494649 CENPQQ7L2Z9 268 aaPredicted RBP13.46□□□□□ -0.25
APTX-230ENST00000494649 MAPKAPK5Q8IW41 473 aa13.46□□□□□ -0.25
APTX-230ENST00000494649 ZSCAN29Q8IWY8 852 aaPredicted RBP13.46□□□□□ -0.25
APTX-230ENST00000494649 TEX11Q8IYF3 940 aa13.46□□□□□ -0.25
APTX-230ENST00000494649 KBTBD3Q8NAB2 608 aa13.46□□□□□ -0.25
APTX-230ENST00000494649 TGFBRAP1Q8WUH2 860 aa13.46□□□□□ -0.25
APTX-230ENST00000494649 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.46□□□□□ -0.25
APTX-230ENST00000494649 TCRBV5S4A2TA0A5A2 114 aa13.46□□□□□ -0.26
APTX-230ENST00000494649 BAG3O95817 575 aa13.46□□□□□ -0.26
APTX-230ENST00000494649 TNNI2P48788 182 aa13.46□□□□□ -0.26
APTX-230ENST00000494649 MIGA2Q7L4E1 593 aa13.46□□□□□ -0.26
APTX-230ENST00000494649 ARMT1Q9H993 441 aa13.46□□□□□ -0.26
APTX-230ENST00000494649 LCORLQ8N3X6 602 aa13.45□□□□□ -0.26
APTX-230ENST00000494649 TEPSINQ96N21 525 aa13.45□□□□□ -0.26
APTX-230ENST00000494649 SEC62Q99442 399 aaKnown RBP13.45□□□□□ -0.26
APTX-230ENST00000494649 PUS7LQ9H0K6 701 aaKnown RBP13.45□□□□□ -0.26
APTX-230ENST00000494649 GBA2Q9HCG7 927 aaPredicted RBP13.45□□□□□ -0.26
APTX-230ENST00000494649 SAP30BPQ9UHR5 308 aaKnown RBP13.45□□□□□ -0.26
APTX-230ENST00000494649 SSC5DA1L4H1 1573 aa13.45□□□□□ -0.26
APTX-230ENST00000494649 MAGEB6P1A0A0J9YX57 407 aa13.44□□□□□ -0.26
APTX-230ENST00000494649 UBE2Q2LH0YL09 131 aa13.44□□□□□ -0.26
APTX-230ENST00000494649 DDTLA6NHG4 134 aaPredicted RBP13.44□□□□□ -0.26
APTX-230ENST00000494649 FAM196BA6NMK8 535 aa13.44□□□□□ -0.26
APTX-230ENST00000494649 PRKAB2O43741 272 aa13.44□□□□□ -0.26
APTX-230ENST00000494649 MBD4O95243 580 aa13.44□□□□□ -0.26
APTX-230ENST00000494649 HUNKP57058 714 aa13.44□□□□□ -0.26
APTX-230ENST00000494649 SDR42E1Q8WUS8 393 aa13.44□□□□□ -0.26
APTX-230ENST00000494649 RIOK1Q9BRS2 568 aaKnown RBP13.44□□□□□ -0.26
APTX-230ENST00000494649 CREBZFQ9NS37 354 aa13.44□□□□□ -0.26
APTX-230ENST00000494649 ANGEL1Q9UNK9 670 aaKnown RBP13.44□□□□□ -0.26
APTX-230ENST00000494649 AK9Q5TCS8 1911 aa13.43□□□□□ -0.26
APTX-230ENST00000494649 NF2P35240 595 aa13.43□□□□□ -0.26
APTX-230ENST00000494649 USP5P45974 858 aa13.43□□□□□ -0.26
APTX-230ENST00000494649 SH3BP5LQ7L8J4 393 aa13.43□□□□□ -0.26
APTX-230ENST00000494649 SAPCD2Q86UD0 394 aa13.43□□□□□ -0.26
APTX-230ENST00000494649 C2orf69Q8N8R5 385 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms