RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 SLKQ9H2G2 1235 aaPredicted RBP8.08□□□□□ -1.12
MSH5-217ENST00000494458 BMP2KQ9NSY1 1161 aaPredicted RBP8.08□□□□□ -1.12
MSH5-217ENST00000494458 LRP2BPQ9P2M1 347 aa8.08□□□□□ -1.12
MSH5-217ENST00000494458 TPCN1Q9ULQ1 816 aa8.08□□□□□ -1.12
MSH5-217ENST00000494458 NSFL1CQ9UNZ2 370 aaKnown RBP8.08□□□□□ -1.12
MSH5-217ENST00000494458 SUGT1Q9Y2Z0 365 aa8.08□□□□□ -1.12
MSH5-217ENST00000494458 ZDHHC9Q9Y397 364 aa8.08□□□□□ -1.12
MSH5-217ENST00000494458 COL11A2P13942 1736 aaPredicted RBP8.07□□□□□ -1.12
MSH5-217ENST00000494458 KIAA1551Q9HCM1 1747 aa8.07□□□□□ -1.12
MSH5-217ENST00000494458 H0YIN7 160 aa8.07□□□□□ -1.12
MSH5-217ENST00000494458 MBD4O95243 580 aa8.07□□□□□ -1.12
MSH5-217ENST00000494458 KCNA3P22001 575 aa8.07□□□□□ -1.12
MSH5-217ENST00000494458 NT5C2P49902 561 aa8.07□□□□□ -1.12
MSH5-217ENST00000494458 FKBP1AP62942 108 aaKnown RBP8.07□□□□□ -1.12
MSH5-217ENST00000494458 NUCB2P80303 420 aa8.07□□□□□ -1.12
MSH5-217ENST00000494458 MECOMQ03112 1051 aa8.07□□□□□ -1.12
MSH5-217ENST00000494458 ERICH6Q7L0X2 663 aa8.07□□□□□ -1.12
MSH5-217ENST00000494458 VPS37DQ86XT2 251 aa8.07□□□□□ -1.12
MSH5-217ENST00000494458 LCORLQ8N3X6 602 aa8.07□□□□□ -1.12
MSH5-217ENST00000494458 RGS22Q8NE09 1264 aa8.07□□□□□ -1.12
MSH5-217ENST00000494458 CNKSR1Q969H4 720 aa8.07□□□□□ -1.12
MSH5-217ENST00000494458 AIDAQ96BJ3 306 aa8.07□□□□□ -1.12
MSH5-217ENST00000494458 ZNF274Q96GC6 653 aaPredicted RBP8.07□□□□□ -1.12
MSH5-217ENST00000494458 PDGFDQ9GZP0 370 aaPredicted RBP8.07□□□□□ -1.12
MSH5-217ENST00000494458 IQSEC3Q9UPP2 1182 aaPredicted RBP8.07□□□□□ -1.12
MSH5-217ENST00000494458 TACC3Q9Y6A5 838 aa8.07□□□□□ -1.12
MSH5-217ENST00000494458 SPDYE4A6NLX3 237 aa8.06□□□□□ -1.12
MSH5-217ENST00000494458 ZNF213O14771 459 aa8.06□□□□□ -1.12
MSH5-217ENST00000494458 PFKFB2O60825 505 aa8.06□□□□□ -1.12
MSH5-217ENST00000494458 UFL1O94874 794 aa8.06□□□□□ -1.12
MSH5-217ENST00000494458 LARGE1O95461 756 aa8.06□□□□□ -1.12
MSH5-217ENST00000494458 BRD1O95696 1058 aa8.06□□□□□ -1.12
MSH5-217ENST00000494458 PCP11498 1178 aaKnown RBP8.06□□□□□ -1.12
MSH5-217ENST00000494458 CYP7A1P22680 504 aa8.06□□□□□ -1.12
MSH5-217ENST00000494458 PRDX5P30044 214 aa8.06□□□□□ -1.12
MSH5-217ENST00000494458 ANTXR2P58335 489 aa8.06□□□□□ -1.12
MSH5-217ENST00000494458 SBK1Q52WX2 424 aa8.06□□□□□ -1.12
MSH5-217ENST00000494458 NAA16Q6N069 864 aaPredicted RBP8.06□□□□□ -1.12
MSH5-217ENST00000494458 C2CD5Q86YS7 1000 aa8.06□□□□□ -1.12
MSH5-217ENST00000494458 CERS3Q8IU89 383 aa8.06□□□□□ -1.12
MSH5-217ENST00000494458 MPNDQ8N594 471 aa8.06□□□□□ -1.12
MSH5-217ENST00000494458 TBC1D22AQ8WUA7 517 aa8.06□□□□□ -1.12
MSH5-217ENST00000494458 STAG1Q8WVM7 1258 aa8.06□□□□□ -1.12
MSH5-217ENST00000494458 SGIP1Q9BQI5 828 aa8.06□□□□□ -1.12
MSH5-217ENST00000494458 ARMT1Q9H993 441 aa8.06□□□□□ -1.12
MSH5-217ENST00000494458 TRPC6Q9Y210 931 aa8.06□□□□□ -1.12
MSH5-217ENST00000494458 TIAM2Q8IVF5 1701 aa8.06□□□□□ -1.12
MSH5-217ENST00000494458 KIF13BQ9NQT8 1826 aa8.06□□□□□ -1.12
MSH5-217ENST00000494458 GAKO14976 1311 aa8.05□□□□□ -1.12
MSH5-217ENST00000494458 GPR75-ASB3A0A0A6YYF3 556 aa8.05□□□□□ -1.12
MSH5-217ENST00000494458 MAGEB6P1A0A0J9YX57 407 aa8.05□□□□□ -1.12
MSH5-217ENST00000494458 PRKAB2O43741 272 aa8.05□□□□□ -1.12
MSH5-217ENST00000494458 GRIK5Q16478 980 aa8.05□□□□□ -1.12
MSH5-217ENST00000494458 MSL1Q68DK7 614 aa8.05□□□□□ -1.12
MSH5-217ENST00000494458 Q6ZUG5 572 aa8.05□□□□□ -1.12
MSH5-217ENST00000494458 PODNQ7Z5L7 613 aa8.05□□□□□ -1.12
MSH5-217ENST00000494458 SGMS1Q86VZ5 419 aa8.05□□□□□ -1.12
MSH5-217ENST00000494458 TBC1D10CQ8IV04 446 aa8.05□□□□□ -1.12
MSH5-217ENST00000494458 NCOA7Q8NI08 942 aa8.05□□□□□ -1.12
MSH5-217ENST00000494458 SMARCC2Q8TAQ2 1214 aa8.05□□□□□ -1.12
MSH5-217ENST00000494458 NKX2-3Q8TAU0 364 aa8.05□□□□□ -1.12
MSH5-217ENST00000494458 IGDCC4Q8TDY8 1250 aa8.05□□□□□ -1.12
MSH5-217ENST00000494458 TNPO1Q92973 898 aaKnown RBP8.05□□□□□ -1.12
MSH5-217ENST00000494458 LLPHQ9BRT6 129 aaKnown RBP8.05□□□□□ -1.12
MSH5-217ENST00000494458 NACAP1Q9BZK3 213 aa8.05□□□□□ -1.12
MSH5-217ENST00000494458 VPS33BQ9H267 617 aa8.05□□□□□ -1.12
MSH5-217ENST00000494458 ATP8A2Q9NTI2 1148 aa8.05□□□□□ -1.12
MSH5-217ENST00000494458 RAI14Q9P0K7 980 aa8.05□□□□□ -1.12
MSH5-217ENST00000494458 ABCF2Q9UG63 623 aa8.05□□□□□ -1.12
MSH5-217ENST00000494458 COLQQ9Y215 455 aaPredicted RBP8.05□□□□□ -1.12
MSH5-217ENST00000494458 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.05□□□□□ -1.12
MSH5-217ENST00000494458 LAMA4Q16363 1823 aa8.04□□□□□ -1.12
MSH5-217ENST00000494458 LDHBP07195 334 aaKnown RBP8.04□□□□□ -1.12
MSH5-217ENST00000494458 LDHCP07864 332 aa8.04□□□□□ -1.12
MSH5-217ENST00000494458 MCM4P33991 863 aa8.04□□□□□ -1.12
MSH5-217ENST00000494458 MCM5P33992 734 aa8.04□□□□□ -1.12
MSH5-217ENST00000494458 LIFRP42702 1097 aa8.04□□□□□ -1.12
MSH5-217ENST00000494458 TGFB2P61812 414 aa8.04□□□□□ -1.12
MSH5-217ENST00000494458 GSTO1P78417 241 aa8.04□□□□□ -1.12
MSH5-217ENST00000494458 AKNAD1Q5T1N1 836 aa8.04□□□□□ -1.12
MSH5-217ENST00000494458 SPRYD3Q8NCJ5 442 aa8.04□□□□□ -1.12
MSH5-217ENST00000494458 GTF3C6Q969F1 213 aa8.04□□□□□ -1.12
MSH5-217ENST00000494458 PSMD1Q99460 953 aa8.04□□□□□ -1.12
MSH5-217ENST00000494458 EYA3Q99504 573 aa8.04□□□□□ -1.12
MSH5-217ENST00000494458 TSPYL2Q9H2G4 693 aaPredicted RBP8.04□□□□□ -1.12
MSH5-217ENST00000494458 CNNM2Q9H8M5 875 aa8.04□□□□□ -1.12
MSH5-217ENST00000494458 DCP1AQ9NPI6 582 aaPredicted RBP8.04□□□□□ -1.12
MSH5-217ENST00000494458 SLC4A4Q9Y6R1 1079 aa8.04□□□□□ -1.12
MSH5-217ENST00000494458 NID2Q14112 1375 aa8.04□□□□□ -1.12
MSH5-217ENST00000494458 MAST2Q6P0Q8 1798 aa8.04□□□□□ -1.12
MSH5-217ENST00000494458 SLX4Q8IY92 1834 aa8.03□□□□□ -1.12
MSH5-217ENST00000494458 DLEC1Q9Y238 1755 aa8.03□□□□□ -1.12
MSH5-217ENST00000494458 ORC4O43929 436 aa8.03□□□□□ -1.12
MSH5-217ENST00000494458 FRAT2O75474 233 aaPredicted RBP8.03□□□□□ -1.12
MSH5-217ENST00000494458 PDIA3P30101 505 aaKnown RBP8.03□□□□□ -1.12
MSH5-217ENST00000494458 RCAN1P53805 252 aa8.03□□□□□ -1.12
MSH5-217ENST00000494458 RHBDL3P58872 404 aa8.03□□□□□ -1.12
MSH5-217ENST00000494458 DYNLL1P63167 89 aaKnown RBP8.03□□□□□ -1.12
MSH5-217ENST00000494458 HDLBPQ00341 1268 aaKnown RBP8.03□□□□□ -1.12
MSH5-217ENST00000494458 KIAA2012Q0VF49 1180 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms