RNA–Protein interactions for RNA: ENST00000494300.1

NXF3-206, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 543 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-206ENST00000494300 CCDC24Q8N4L8 307 aa7.53□□□□□ -1.2
NXF3-206ENST00000494300 RDH13Q8NBN7 331 aa7.53□□□□□ -1.2
NXF3-206ENST00000494300 CCDC191Q8NCU4 936 aa7.53□□□□□ -1.2
NXF3-206ENST00000494300 NLGN2Q8NFZ4 835 aa7.53□□□□□ -1.2
NXF3-206ENST00000494300 SSH1Q8WYL5 1049 aa7.53□□□□□ -1.2
NXF3-206ENST00000494300 FRAT1Q92837 279 aaPredicted RBP7.53□□□□□ -1.2
NXF3-206ENST00000494300 NLRP3Q96P20 1036 aa7.53□□□□□ -1.2
NXF3-206ENST00000494300 GMLQ99445 158 aa7.53□□□□□ -1.2
NXF3-206ENST00000494300 PRR14Q9BWN1 585 aa7.53□□□□□ -1.2
NXF3-206ENST00000494300 API5Q9BZZ5 524 aaKnown RBP7.53□□□□□ -1.2
NXF3-206ENST00000494300 BCORQ6W2J9 1755 aa7.53□□□□□ -1.2
NXF3-206ENST00000494300 UBN2Q6ZU65 1347 aa7.52□□□□□ -1.2
NXF3-206ENST00000494300 SRCAPQ6ZRS2 3230 aa7.52□□□□□ -1.21
NXF3-206ENST00000494300 SLC10A3P09131 477 aa7.52□□□□□ -1.21
NXF3-206ENST00000494300 USP17L8P0C7I0 530 aa7.52□□□□□ -1.21
NXF3-206ENST00000494300 NPR1P16066 1061 aa7.52□□□□□ -1.21
NXF3-206ENST00000494300 ATP2B1P20020 1258 aa7.52□□□□□ -1.21
NXF3-206ENST00000494300 CHRNA5P30532 468 aa7.52□□□□□ -1.21
NXF3-206ENST00000494300 TRIM28Q13263 835 aaKnown RBP7.52□□□□□ -1.21
NXF3-206ENST00000494300 KMT5BQ4FZB7 885 aa7.52□□□□□ -1.21
NXF3-206ENST00000494300 G2E3Q7L622 706 aa7.52□□□□□ -1.21
NXF3-206ENST00000494300 SULF1Q8IWU6 871 aa7.52□□□□□ -1.21
NXF3-206ENST00000494300 TTLL6Q8N841 843 aa7.52□□□□□ -1.21
NXF3-206ENST00000494300 LINS1Q8NG48 757 aa7.52□□□□□ -1.21
NXF3-206ENST00000494300 CNKSR1Q969H4 720 aa7.52□□□□□ -1.21
NXF3-206ENST00000494300 RBM17Q96I25 401 aaKnown RBP7.52□□□□□ -1.21
NXF3-206ENST00000494300 MTA3Q9BTC8 594 aa7.52□□□□□ -1.21
NXF3-206ENST00000494300 ISCA1Q9BUE6 129 aa7.52□□□□□ -1.21
NXF3-206ENST00000494300 C9orf78Q9NZ63 289 aaPredicted RBP7.52□□□□□ -1.21
NXF3-206ENST00000494300 PNMA2Q9UL42 364 aa7.52□□□□□ -1.21
NXF3-206ENST00000494300 WWC3Q9ULE0 1092 aa7.52□□□□□ -1.21
NXF3-206ENST00000494300 BCS1LQ9Y276 419 aa7.52□□□□□ -1.21
NXF3-206ENST00000494300 ADCY9O60503 1353 aa7.51□□□□□ -1.21
NXF3-206ENST00000494300 F6X3S4 739 aa7.51□□□□□ -1.21
NXF3-206ENST00000494300 IRS4O14654 1257 aaPredicted RBP7.51□□□□□ -1.21
NXF3-206ENST00000494300 SH3BP5O60239 455 aa7.51□□□□□ -1.21
NXF3-206ENST00000494300 NTSR2O95665 410 aa7.51□□□□□ -1.21
NXF3-206ENST00000494300 HSD3B2P26439 372 aa7.51□□□□□ -1.21
NXF3-206ENST00000494300 ALDH1B1P30837 517 aa7.51□□□□□ -1.21
NXF3-206ENST00000494300 GTF2F1P35269 517 aaKnown RBP eCLIP7.51□□□□□ -1.21
NXF3-206ENST00000494300 RARSP54136 660 aaKnown RBP7.51□□□□□ -1.21
NXF3-206ENST00000494300 COL19A1Q14993 1142 aa7.51□□□□□ -1.21
NXF3-206ENST00000494300 DIXDC1Q155Q3 683 aa7.51□□□□□ -1.21
NXF3-206ENST00000494300 RTL5Q5HYW3 569 aaPredicted RBP7.51□□□□□ -1.21
NXF3-206ENST00000494300 SOGA3Q5TF21 947 aa7.51□□□□□ -1.21
NXF3-206ENST00000494300 STYK1Q6J9G0 422 aa7.51□□□□□ -1.21
NXF3-206ENST00000494300 KRBA2Q6ZNG9 492 aa7.51□□□□□ -1.21
NXF3-206ENST00000494300 DDX46Q7L014 1031 aaKnown RBP7.51□□□□□ -1.21
NXF3-206ENST00000494300 FTSJ3Q8IY81 847 aaKnown RBP7.51□□□□□ -1.21
NXF3-206ENST00000494300 ZBTB38Q8NAP3 1195 aaPredicted RBP7.51□□□□□ -1.21
NXF3-206ENST00000494300 STAG1Q8WVM7 1258 aa7.51□□□□□ -1.21
NXF3-206ENST00000494300 FAM89AQ96GI7 184 aa7.51□□□□□ -1.21
NXF3-206ENST00000494300 MASTLQ96GX5 879 aa7.51□□□□□ -1.21
NXF3-206ENST00000494300 SRCIN1Q9C0H9 1055 aa7.51□□□□□ -1.21
NXF3-206ENST00000494300 PCDH12Q9NPG4 1184 aa7.51□□□□□ -1.21
NXF3-206ENST00000494300 BIN2Q9UBW5 565 aaPredicted RBP7.51□□□□□ -1.21
NXF3-206ENST00000494300 NOB1Q9ULX3 412 aaKnown RBP7.51□□□□□ -1.21
NXF3-206ENST00000494300 IQSEC3Q9UPP2 1182 aaPredicted RBP7.51□□□□□ -1.21
NXF3-206ENST00000494300 HDAC5Q9UQL6 1122 aa7.51□□□□□ -1.21
NXF3-206ENST00000494300 COL4A3BPQ9Y5P4 624 aa7.51□□□□□ -1.21
NXF3-206ENST00000494300 COL24A1Q17RW2 1714 aa7.51□□□□□ -1.21
NXF3-206ENST00000494300 PXDNLA1KZ92 1463 aa7.5□□□□□ -1.21
NXF3-206ENST00000494300 NEURL1BA8MQ27 555 aa7.5□□□□□ -1.21
NXF3-206ENST00000494300 LZTS3O60299 673 aaPredicted RBP7.5□□□□□ -1.21
NXF3-206ENST00000494300 ALDH1L1O75891 902 aa7.5□□□□□ -1.21
NXF3-206ENST00000494300 PCCAP05165 728 aaPredicted RBP7.5□□□□□ -1.21
NXF3-206ENST00000494300 HCLS1P14317 486 aaPredicted RBP7.5□□□□□ -1.21
NXF3-206ENST00000494300 CCT4P50991 539 aaKnown RBP7.5□□□□□ -1.21
NXF3-206ENST00000494300 KCNC4Q03721 635 aa7.5□□□□□ -1.21
NXF3-206ENST00000494300 GCKRQ14397 625 aa7.5□□□□□ -1.21
NXF3-206ENST00000494300 CWF19L2Q2TBE0 894 aaKnown RBP7.5□□□□□ -1.21
NXF3-206ENST00000494300 ZKSCAN2Q63HK3 967 aa7.5□□□□□ -1.21
NXF3-206ENST00000494300 UBE3BQ7Z3V4 1068 aa7.5□□□□□ -1.21
NXF3-206ENST00000494300 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.5□□□□□ -1.21
NXF3-206ENST00000494300 MTRQ99707 1265 aa7.5□□□□□ -1.21
NXF3-206ENST00000494300 PCDHB3Q9Y5E6 796 aa7.5□□□□□ -1.21
NXF3-206ENST00000494300 ABCC12Q96J65 1359 aa7.49□□□□□ -1.21
NXF3-206ENST00000494300 PDE8AO60658 829 aa7.49□□□□□ -1.21
NXF3-206ENST00000494300 AP1G2O75843 785 aa7.49□□□□□ -1.21
NXF3-206ENST00000494300 ITGBL1O95965 494 aaPredicted RBP7.49□□□□□ -1.21
NXF3-206ENST00000494300 SRGNP10124 158 aa7.49□□□□□ -1.21
NXF3-206ENST00000494300 TBX4P57082 545 aa7.49□□□□□ -1.21
NXF3-206ENST00000494300 RHBDL3P58872 404 aa7.49□□□□□ -1.21
NXF3-206ENST00000494300 COPS2P61201 443 aa7.49□□□□□ -1.21
NXF3-206ENST00000494300 CCDC152Q4G0S7 254 aa7.49□□□□□ -1.21
NXF3-206ENST00000494300 SLC10A5Q5PT55 438 aa7.49□□□□□ -1.21
NXF3-206ENST00000494300 ARHGAP27Q6ZUM4 889 aa7.49□□□□□ -1.21
NXF3-206ENST00000494300 NT5DC4Q86YG4 428 aa7.49□□□□□ -1.21
NXF3-206ENST00000494300 ARHGAP45Q92619 1136 aa7.49□□□□□ -1.21
NXF3-206ENST00000494300 ASB16Q96NS5 453 aa7.49□□□□□ -1.21
NXF3-206ENST00000494300 ZSWIM4Q9H7M6 989 aa7.49□□□□□ -1.21
NXF3-206ENST00000494300 DMGDHQ9UI17 866 aaKnown RBP7.49□□□□□ -1.21
NXF3-206ENST00000494300 RCAN3Q9UKA8 241 aa7.49□□□□□ -1.21
NXF3-206ENST00000494300 NOVA2Q9UNW9 492 aaKnown RBP7.49□□□□□ -1.21
NXF3-206ENST00000494300 NUP98P52948 1817 aa7.48□□□□□ -1.21
NXF3-206ENST00000494300 GRM8O00222 908 aa7.48□□□□□ -1.21
NXF3-206ENST00000494300 SPTLC1O15269 473 aa7.48□□□□□ -1.21
NXF3-206ENST00000494300 ACTN4O43707 911 aaKnown RBP7.48□□□□□ -1.21
NXF3-206ENST00000494300 ATP9BO43861 1147 aa7.48□□□□□ -1.21
NXF3-206ENST00000494300 LILRB3O75022 631 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms