RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 XKR5Q6UX68 686 aa4.8□□□□□ -1.64
PTPN12-212ENST00000494248 KCNK12Q9HB15 430 aa4.8□□□□□ -1.64
PTPN12-212ENST00000494248 FAM69CQ0P6D2 419 aa4.79□□□□□ -1.64
PTPN12-212ENST00000494248 ZNF423Q2M1K9 1284 aa4.79□□□□□ -1.64
PTPN12-212ENST00000494248 SLC23A3Q6PIS1 610 aa4.79□□□□□ -1.64
PTPN12-212ENST00000494248 FNBP4Q8N3X1 1017 aaPredicted RBP4.79□□□□□ -1.64
PTPN12-212ENST00000494248 ASAP3Q8TDY4 903 aa4.79□□□□□ -1.64
PTPN12-212ENST00000494248 PPP1R16BQ96T49 567 aa4.79□□□□□ -1.64
PTPN12-212ENST00000494248 BHLHE41Q9C0J9 482 aaPredicted RBP4.79□□□□□ -1.64
PTPN12-212ENST00000494248 LATS2Q9NRM7 1088 aa4.79□□□□□ -1.64
PTPN12-212ENST00000494248 STIM2Q9P246 746 aa4.79□□□□□ -1.64
PTPN12-212ENST00000494248 AP4E1Q9UPM8 1137 aa4.79□□□□□ -1.64
PTPN12-212ENST00000494248 NPIPB6E9PJ23 425 aa4.78□□□□□ -1.64
PTPN12-212ENST00000494248 EREGO14944 169 aa4.78□□□□□ -1.64
PTPN12-212ENST00000494248 LEFTY1O75610 366 aa4.78□□□□□ -1.64
PTPN12-212ENST00000494248 UBTFP17480 764 aaKnown RBP4.78□□□□□ -1.64
PTPN12-212ENST00000494248 OXCT1P55809 520 aa4.78□□□□□ -1.64
PTPN12-212ENST00000494248 CYP27C1Q4G0S4 372 aa4.78□□□□□ -1.64
PTPN12-212ENST00000494248 CDCA8Q53HL2 280 aa4.78□□□□□ -1.64
PTPN12-212ENST00000494248 PEAR1Q5VY43 1037 aaPredicted RBP4.78□□□□□ -1.64
PTPN12-212ENST00000494248 PPP1R9AQ9ULJ8 1098 aa4.78□□□□□ -1.64
PTPN12-212ENST00000494248 CTNND2Q9UQB3 1225 aa4.78□□□□□ -1.64
PTPN12-212ENST00000494248 RGS19P49795 217 aa4.77□□□□□ -1.65
PTPN12-212ENST00000494248 NFKB2Q00653 900 aa4.77□□□□□ -1.65
PTPN12-212ENST00000494248 IFI16Q16666 785 aaKnown RBP4.77□□□□□ -1.65
PTPN12-212ENST00000494248 TRIM56Q9BRZ2 755 aaKnown RBP4.77□□□□□ -1.65
PTPN12-212ENST00000494248 PITPNM2Q9BZ72 1349 aa4.76□□□□□ -1.65
PTPN12-212ENST00000494248 FOXD2O60548 495 aaPredicted RBP4.76□□□□□ -1.65
PTPN12-212ENST00000494248 ANGEL2Q5VTE6 544 aaKnown RBP4.76□□□□□ -1.65
PTPN12-212ENST00000494248 BORCS6Q96GS4 357 aa4.76□□□□□ -1.65
PTPN12-212ENST00000494248 HRASLS5Q96KN8 279 aa4.76□□□□□ -1.65
PTPN12-212ENST00000494248 CEACAM5P06731 702 aa4.75□□□□□ -1.65
PTPN12-212ENST00000494248 POU4F3Q15319 338 aa4.75□□□□□ -1.65
PTPN12-212ENST00000494248 WDR18Q9BV38 432 aa4.75□□□□□ -1.65
PTPN12-212ENST00000494248 CD320Q9NPF0 282 aa4.75□□□□□ -1.65
PTPN12-212ENST00000494248 RAD18Q9NS91 495 aa4.75□□□□□ -1.65
PTPN12-212ENST00000494248 ZMIZ1Q9ULJ6 1067 aa4.75□□□□□ -1.65
PTPN12-212ENST00000494248 NOVA2Q9UNW9 492 aaKnown RBP4.75□□□□□ -1.65
PTPN12-212ENST00000494248 ACIN1Q9UKV3 1341 aaKnown RBP4.74□□□□□ -1.65
PTPN12-212ENST00000494248 SLC24A1O60721 1099 aa4.74□□□□□ -1.65
PTPN12-212ENST00000494248 AOC2O75106 756 aa4.74□□□□□ -1.65
PTPN12-212ENST00000494248 GLI1P08151 1106 aa4.74□□□□□ -1.65
PTPN12-212ENST00000494248 PCDH1Q08174 1060 aa4.74□□□□□ -1.65
PTPN12-212ENST00000494248 FLIIQ13045 1269 aa4.74□□□□□ -1.65
PTPN12-212ENST00000494248 SWI5Q1ZZU3 235 aa4.74□□□□□ -1.65
PTPN12-212ENST00000494248 CFAP70Q5T0N1 1121 aa4.74□□□□□ -1.65
PTPN12-212ENST00000494248 EDEM1Q92611 657 aa4.74□□□□□ -1.65
PTPN12-212ENST00000494248 TNKS2Q9H2K2 1166 aa4.74□□□□□ -1.65
PTPN12-212ENST00000494248 CXXC1Q9P0U4 656 aaPredicted RBP4.74□□□□□ -1.65
PTPN12-212ENST00000494248 TMEM265A0A087WTH1 108 aa4.73□□□□□ -1.65
PTPN12-212ENST00000494248 NFIBO00712 420 aa4.73□□□□□ -1.65
PTPN12-212ENST00000494248 PDGFAP04085 211 aa4.73□□□□□ -1.65
PTPN12-212ENST00000494248 KCNA10Q16322 511 aa4.73□□□□□ -1.65
PTPN12-212ENST00000494248 SPRED3Q2MJR0 410 aa4.73□□□□□ -1.65
PTPN12-212ENST00000494248 ABTB2Q8N961 1025 aa4.73□□□□□ -1.65
PTPN12-212ENST00000494248 CLUAP1Q96AJ1 413 aa4.73□□□□□ -1.65
PTPN12-212ENST00000494248 CRELD1Q96HD1 420 aa4.73□□□□□ -1.65
PTPN12-212ENST00000494248 HEXIM2Q96MH2 286 aaKnown RBP4.73□□□□□ -1.65
PTPN12-212ENST00000494248 DIRC2Q96SL1 478 aa4.73□□□□□ -1.65
PTPN12-212ENST00000494248 MKNK2Q9HBH9 465 aa4.73□□□□□ -1.65
PTPN12-212ENST00000494248 C19orf73Q9NVV2 129 aa4.73□□□□□ -1.65
PTPN12-212ENST00000494248 TMPRSS2O15393 492 aa4.72□□□□□ -1.65
PTPN12-212ENST00000494248 CYP11A1P05108 521 aa4.72□□□□□ -1.65
PTPN12-212ENST00000494248 ITIH2P19823 946 aa4.72□□□□□ -1.65
PTPN12-212ENST00000494248 DNM1Q05193 864 aaKnown RBP4.72□□□□□ -1.65
PTPN12-212ENST00000494248 ZP2Q05996 745 aa4.72□□□□□ -1.65
PTPN12-212ENST00000494248 TPRNQ4KMQ1 711 aa4.72□□□□□ -1.65
PTPN12-212ENST00000494248 MPZL3Q6UWV2 235 aa4.72□□□□□ -1.65
PTPN12-212ENST00000494248 FAM214BQ7L5A3 538 aa4.72□□□□□ -1.65
PTPN12-212ENST00000494248 STK32AQ8WU08 396 aa4.72□□□□□ -1.65
PTPN12-212ENST00000494248 PMEPA1Q969W9 287 aa4.72□□□□□ -1.65
PTPN12-212ENST00000494248 WDR89Q96FK6 387 aaPredicted RBP4.72□□□□□ -1.65
PTPN12-212ENST00000494248 DUSP23Q9BVJ7 150 aa4.72□□□□□ -1.65
PTPN12-212ENST00000494248 SEPT3Q9UH03 358 aa4.72□□□□□ -1.65
PTPN12-212ENST00000494248 A0A0G2JLL6 359 aaPredicted RBP4.71□□□□□ -1.66
PTPN12-212ENST00000494248 GRIA4P48058 902 aa4.71□□□□□ -1.66
PTPN12-212ENST00000494248 C8orf34Q49A92 452 aa4.71□□□□□ -1.66
PTPN12-212ENST00000494248 ATG14Q6ZNE5 492 aa4.71□□□□□ -1.66
PTPN12-212ENST00000494248 FBXO15Q8NCQ5 510 aaPredicted RBP4.71□□□□□ -1.66
PTPN12-212ENST00000494248 CALR3Q96L12 384 aaKnown RBP4.71□□□□□ -1.66
PTPN12-212ENST00000494248 FOXD3Q9UJU5 478 aaPredicted RBP4.71□□□□□ -1.66
PTPN12-212ENST00000494248 A0A096LPE4 126 aa4.7□□□□□ -1.66
PTPN12-212ENST00000494248 A0A1W2PPZ6 126 aa4.7□□□□□ -1.66
PTPN12-212ENST00000494248 TNFRSF21O75509 655 aa4.7□□□□□ -1.66
PTPN12-212ENST00000494248 EDN3P14138 238 aa4.7□□□□□ -1.66
PTPN12-212ENST00000494248 AFMP43652 599 aa4.7□□□□□ -1.66
PTPN12-212ENST00000494248 IKZF1Q13422 519 aa4.7□□□□□ -1.66
PTPN12-212ENST00000494248 KIRREL1Q96J84 757 aa4.7□□□□□ -1.66
PTPN12-212ENST00000494248 CLEC4MQ9H2X3 399 aaPredicted RBP4.7□□□□□ -1.66
PTPN12-212ENST00000494248 NSUN3Q9H649 340 aaKnown RBP4.7□□□□□ -1.66
PTPN12-212ENST00000494248 DISC1Q9NRI5 854 aa4.7□□□□□ -1.66
PTPN12-212ENST00000494248 SLAIN2Q9P270 581 aa4.7□□□□□ -1.66
PTPN12-212ENST00000494248 ETV2O00321 342 aaPredicted RBP4.69□□□□□ -1.66
PTPN12-212ENST00000494248 MED14OSP0DP75 135 aa4.69□□□□□ -1.66
PTPN12-212ENST00000494248 SYN1P17600 705 aa4.69□□□□□ -1.66
PTPN12-212ENST00000494248 LIG1P18858 919 aa4.69□□□□□ -1.66
PTPN12-212ENST00000494248 RFX1P22670 979 aa4.69□□□□□ -1.66
PTPN12-212ENST00000494248 TMEM67Q5HYA8 995 aa4.69□□□□□ -1.66
PTPN12-212ENST00000494248 SPACA3Q8IXA5 215 aa4.69□□□□□ -1.66
PTPN12-212ENST00000494248 FANCD2OSQ96PS1 177 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms