RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 CABLES1Q8TDN4 633 aa21.56■■□□□ 1.04
COL27A1-207ENST00000494090 GLT8D2Q9H1C3 349 aa21.56■■□□□ 1.04
COL27A1-207ENST00000494090 OGFRQ9NZT2 677 aa21.56■■□□□ 1.04
COL27A1-207ENST00000494090 PNMA6EA0A0J9YXQ4 647 aa21.56■■□□□ 1.04
COL27A1-207ENST00000494090 ERO1AQ96HE7 468 aa21.56■■□□□ 1.04
COL27A1-207ENST00000494090 ZMYM3Q14202 1370 aa21.56■■□□□ 1.04
COL27A1-207ENST00000494090 PARP1P09874 1014 aaKnown RBP21.55■■□□□ 1.04
COL27A1-207ENST00000494090 KIAA0232Q92628 1395 aa21.55■■□□□ 1.04
COL27A1-207ENST00000494090 HSPA4P34932 840 aa21.55■■□□□ 1.04
COL27A1-207ENST00000494090 MAP3K9P80192 1104 aa21.55■■□□□ 1.04
COL27A1-207ENST00000494090 FAM227BQ96M60 508 aa21.55■■□□□ 1.04
COL27A1-207ENST00000494090 LMBRD1Q9NUN5 540 aa21.55■■□□□ 1.04
COL27A1-207ENST00000494090 RSPH14Q9UHP6 348 aa21.55■■□□□ 1.04
COL27A1-207ENST00000494090 TRAPPC3LQ5T215 181 aa21.55■■□□□ 1.04
COL27A1-207ENST00000494090 APPBP2Q92624 585 aa21.55■■□□□ 1.04
COL27A1-207ENST00000494090 MAST3O60307 1309 aa21.55■■□□□ 1.04
COL27A1-207ENST00000494090 TSGA10Q9BZW7 698 aa21.55■■□□□ 1.04
COL27A1-207ENST00000494090 PLS1Q14651 629 aa21.54■■□□□ 1.04
COL27A1-207ENST00000494090 CAPZA3Q96KX2 299 aa21.54■■□□□ 1.04
COL27A1-207ENST00000494090 ZMYND15Q9H091 742 aa21.54■■□□□ 1.04
COL27A1-207ENST00000494090 LEO1Q8WVC0 666 aaPredicted RBP21.54■■□□□ 1.04
COL27A1-207ENST00000494090 KCNH3Q9ULD8 1083 aa21.54■■□□□ 1.04
COL27A1-207ENST00000494090 B4E1Z4 1266 aa21.54■■□□□ 1.04
COL27A1-207ENST00000494090 ANGEL1Q9UNK9 670 aaKnown RBP21.54■■□□□ 1.04
COL27A1-207ENST00000494090 VWA3AA6NCI4 1184 aa21.53■■□□□ 1.04
COL27A1-207ENST00000494090 CAPN2P17655 700 aa21.53■■□□□ 1.04
COL27A1-207ENST00000494090 ARID5AQ03989 594 aa21.53■■□□□ 1.04
COL27A1-207ENST00000494090 KIAA1524Q8TCG1 905 aa21.53■■□□□ 1.04
COL27A1-207ENST00000494090 PLCD1P51178 756 aa21.53■■□□□ 1.04
COL27A1-207ENST00000494090 ZNF75DP51815 510 aa21.53■■□□□ 1.04
COL27A1-207ENST00000494090 TRIM14Q14142 442 aa21.53■■□□□ 1.04
COL27A1-207ENST00000494090 CCDC65Q8IXS2 484 aa21.53■■□□□ 1.04
COL27A1-207ENST00000494090 KBTBD3Q8NAB2 608 aa21.53■■□□□ 1.04
COL27A1-207ENST00000494090 TTC14Q96N46 770 aa21.53■■□□□ 1.04
COL27A1-207ENST00000494090 ZKSCAN3Q9BRR0 538 aa21.53■■□□□ 1.04
COL27A1-207ENST00000494090 KCNA6P17658 529 aa21.53■■□□□ 1.04
COL27A1-207ENST00000494090 ZNF174Q15697 407 aa21.53■■□□□ 1.04
COL27A1-207ENST00000494090 CUTAO60888 179 aa21.52■■□□□ 1.04
COL27A1-207ENST00000494090 ZNF354CQ86Y25 554 aa21.52■■□□□ 1.04
COL27A1-207ENST00000494090 CBX8Q9HC52 389 aa21.52■■□□□ 1.04
COL27A1-207ENST00000494090 STK24Q9Y6E0 443 aa21.52■■□□□ 1.04
COL27A1-207ENST00000494090 UBE2Q2Q8WVN8 375 aa21.52■■□□□ 1.04
COL27A1-207ENST00000494090 XAGE2Q96GT9 111 aa21.52■■□□□ 1.04
COL27A1-207ENST00000494090 TM6SF1Q9BZW5 370 aa21.52■■□□□ 1.04
COL27A1-207ENST00000494090 RRAGDQ9NQL2 400 aaPredicted RBP21.52■■□□□ 1.04
COL27A1-207ENST00000494090 ABCC4O15439 1325 aa21.52■■□□□ 1.04
COL27A1-207ENST00000494090 ABCC2Q92887 1545 aa21.52■■□□□ 1.03
COL27A1-207ENST00000494090 PUM3Q15397 648 aaKnown RBP21.52■■□□□ 1.03
COL27A1-207ENST00000494090 CNBD1Q8NA66 436 aa21.52■■□□□ 1.03
COL27A1-207ENST00000494090 SUCLG2Q96I99 432 aa21.52■■□□□ 1.03
COL27A1-207ENST00000494090 PLXNC1O60486 1568 aa21.52■■□□□ 1.03
COL27A1-207ENST00000494090 SH3TC1Q8TE82 1336 aa21.51■■□□□ 1.03
COL27A1-207ENST00000494090 RHOXF2BP0C7M4 288 aa21.51■■□□□ 1.03
COL27A1-207ENST00000494090 ITGA6P23229 1130 aa21.51■■□□□ 1.03
COL27A1-207ENST00000494090 TUBB2AQ13885 445 aa21.51■■□□□ 1.03
COL27A1-207ENST00000494090 ATRIPQ8WXE1 791 aa21.51■■□□□ 1.03
COL27A1-207ENST00000494090 RHOXF2Q9BQY4 288 aa21.51■■□□□ 1.03
COL27A1-207ENST00000494090 TUBB2BQ9BVA1 445 aa21.51■■□□□ 1.03
COL27A1-207ENST00000494090 VAV2P52735 878 aa21.51■■□□□ 1.03
COL27A1-207ENST00000494090 IMPACTQ9P2X3 320 aa21.51■■□□□ 1.03
COL27A1-207ENST00000494090 ATP7AQ04656 1500 aa21.51■■□□□ 1.03
COL27A1-207ENST00000494090 EEF2P13639 858 aaKnown RBP21.51■■□□□ 1.03
COL27A1-207ENST00000494090 CCDC122Q5T0U0 273 aa21.51■■□□□ 1.03
COL27A1-207ENST00000494090 SV2BQ7L1I2 683 aa21.51■■□□□ 1.03
COL27A1-207ENST00000494090 HDXQ7Z353 690 aa21.51■■□□□ 1.03
COL27A1-207ENST00000494090 TEX11Q8IYF3 940 aa21.51■■□□□ 1.03
COL27A1-207ENST00000494090 FAM89AQ96GI7 184 aa21.51■■□□□ 1.03
COL27A1-207ENST00000494090 DISP1Q96F81 1524 aa21.51■■□□□ 1.03
COL27A1-207ENST00000494090 NBPF11Q86T75 865 aa21.5■■□□□ 1.03
COL27A1-207ENST00000494090 IGSF22Q8N9C0 903 aa21.5■■□□□ 1.03
COL27A1-207ENST00000494090 KLHDC4Q8TBB5 520 aa21.5■■□□□ 1.03
COL27A1-207ENST00000494090 NCOA5Q9HCD5 579 aaKnown RBP21.5■■□□□ 1.03
COL27A1-207ENST00000494090 VPS18Q9P253 973 aa21.5■■□□□ 1.03
COL27A1-207ENST00000494090 ARHGEF10O15013 1369 aa21.5■■□□□ 1.03
COL27A1-207ENST00000494090 BRD1O95696 1058 aa21.5■■□□□ 1.03
COL27A1-207ENST00000494090 FANCCQ00597 558 aa21.5■■□□□ 1.03
COL27A1-207ENST00000494090 RGS22Q8NE09 1264 aa21.5■■□□□ 1.03
COL27A1-207ENST00000494090 DKC1O60832 514 aaKnown RBP eCLIP21.5■■□□□ 1.037e-7■□□□□ 10.2
COL27A1-207ENST00000494090 EVCP57679 992 aa21.5■■□□□ 1.03
COL27A1-207ENST00000494090 GSTA5Q7RTV2 222 aa21.5■■□□□ 1.03
COL27A1-207ENST00000494090 FBF1Q8TES7 1133 aa21.5■■□□□ 1.03
COL27A1-207ENST00000494090 HOOK2Q96ED9 719 aa21.5■■□□□ 1.03
COL27A1-207ENST00000494090 CTNND2Q9UQB3 1225 aa21.5■■□□□ 1.03
COL27A1-207ENST00000494090 BACH1O14867 736 aa21.49■■□□□ 1.03
COL27A1-207ENST00000494090 GPAA1O43292 621 aa21.49■■□□□ 1.03
COL27A1-207ENST00000494090 FAM173BQ6P4H8 233 aa21.49■■□□□ 1.03
COL27A1-207ENST00000494090 TICAM2Q86XR7 235 aa21.49■■□□□ 1.03
COL27A1-207ENST00000494090 GADD45BO75293 160 aaPredicted RBP21.49■■□□□ 1.03
COL27A1-207ENST00000494090 MNAT1P51948 309 aa21.49■■□□□ 1.03
COL27A1-207ENST00000494090 MLKLQ8NB16 471 aa21.49■■□□□ 1.03
COL27A1-207ENST00000494090 GNPATO15228 680 aa21.49■■□□□ 1.03
COL27A1-207ENST00000494090 TNNC1P63316 161 aa21.49■■□□□ 1.03
COL27A1-207ENST00000494090 PPP2R3AQ06190 1150 aa21.49■■□□□ 1.03
COL27A1-207ENST00000494090 LGR6Q9HBX8 967 aa21.49■■□□□ 1.03
COL27A1-207ENST00000494090 SSH2Q76I76 1423 aa21.49■■□□□ 1.03
COL27A1-207ENST00000494090 NLRP12P59046 1061 aa21.49■■□□□ 1.03
COL27A1-207ENST00000494090 ZFP91Q96JP5 570 aaPredicted RBP21.49■■□□□ 1.03
COL27A1-207ENST00000494090 PLIN2Q99541 437 aa21.49■■□□□ 1.03
COL27A1-207ENST00000494090 TTF2Q9UNY4 1162 aaKnown RBP21.49■■□□□ 1.03
COL27A1-207ENST00000494090 ATP2A2P16615 1042 aaKnown RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms