RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 CARD6Q9BX69 1037 aa8.16□□□□□ -1.1
EPHA3-203ENST00000494014 THSD7BQ9C0I4 1608 aa8.16□□□□□ -1.1
EPHA3-203ENST00000494014 HEG1Q9ULI3 1381 aa8.16□□□□□ -1.1
EPHA3-203ENST00000494014 NR1I2O75469 434 aa8.16□□□□□ -1.1
EPHA3-203ENST00000494014 RFC4P35249 363 aa8.16□□□□□ -1.1
EPHA3-203ENST00000494014 EIF5P55010 431 aaKnown RBP8.16□□□□□ -1.1
EPHA3-203ENST00000494014 GORABQ5T7V8 394 aa8.16□□□□□ -1.1
EPHA3-203ENST00000494014 MSL1Q68DK7 614 aa8.16□□□□□ -1.1
EPHA3-203ENST00000494014 PDRG1Q9NUG6 133 aa8.16□□□□□ -1.1
EPHA3-203ENST00000494014 GOLGA6L9A6NEM1 432 aa8.15□□□□□ -1.1
EPHA3-203ENST00000494014 POTEB2H3BUK9 544 aa8.15□□□□□ -1.1
EPHA3-203ENST00000494014 SRGAP3O43295 1099 aa8.15□□□□□ -1.1
EPHA3-203ENST00000494014 URI1O94763 535 aaPredicted RBP8.15□□□□□ -1.1
EPHA3-203ENST00000494014 CCT4P50991 539 aaKnown RBP8.15□□□□□ -1.1
EPHA3-203ENST00000494014 APLP1P51693 650 aa8.15□□□□□ -1.1
EPHA3-203ENST00000494014 SULT6B1Q6IMI4 303 aa8.15□□□□□ -1.1
EPHA3-203ENST00000494014 HNRNPLLQ8WVV9 542 aaKnown RBP8.15□□□□□ -1.1
EPHA3-203ENST00000494014 LSG1Q9H089 658 aaKnown RBP8.15□□□□□ -1.1
EPHA3-203ENST00000494014 LARGE1O95461 756 aa8.15□□□□□ -1.11
EPHA3-203ENST00000494014 GNAI2P04899 355 aa8.15□□□□□ -1.11
EPHA3-203ENST00000494014 GNAI3P08754 354 aa8.15□□□□□ -1.11
EPHA3-203ENST00000494014 TUBB4BP68371 445 aa8.15□□□□□ -1.11
EPHA3-203ENST00000494014 SART3Q15020 963 aaKnown RBP8.15□□□□□ -1.11
EPHA3-203ENST00000494014 C11orf57Q6ZUT1 292 aaPredicted RBP8.15□□□□□ -1.11
EPHA3-203ENST00000494014 TADA2BQ86TJ2 420 aa8.15□□□□□ -1.11
EPHA3-203ENST00000494014 CYP46A1Q9Y6A2 500 aa8.15□□□□□ -1.11
EPHA3-203ENST00000494014 ZSCAN12O43309 604 aa8.14□□□□□ -1.11
EPHA3-203ENST00000494014 PRR29P0C7W0 189 aa8.14□□□□□ -1.11
EPHA3-203ENST00000494014 TDO2P48775 406 aa8.14□□□□□ -1.11
EPHA3-203ENST00000494014 DDR1Q08345 913 aa8.14□□□□□ -1.11
EPHA3-203ENST00000494014 APOBRQ0VD83 1088 aa8.14□□□□□ -1.11
EPHA3-203ENST00000494014 LONRF2Q1L5Z9 754 aa8.14□□□□□ -1.11
EPHA3-203ENST00000494014 RSRC2Q7L4I2 434 aaKnown RBP8.14□□□□□ -1.11
EPHA3-203ENST00000494014 DHX40Q8IX18 779 aaKnown RBP8.14□□□□□ -1.11
EPHA3-203ENST00000494014 DNAAF4Q8WXU2 420 aa8.14□□□□□ -1.11
EPHA3-203ENST00000494014 GOLGA1Q92805 767 aa8.14□□□□□ -1.11
EPHA3-203ENST00000494014 THUMPD2Q9BTF0 503 aaKnown RBP8.14□□□□□ -1.11
EPHA3-203ENST00000494014 PIM2Q9P1W9 311 aa8.14□□□□□ -1.11
EPHA3-203ENST00000494014 SUFUQ9UMX1 484 aa8.14□□□□□ -1.11
EPHA3-203ENST00000494014 ANKRD36CQ5JPF3 1778 aa8.14□□□□□ -1.11
EPHA3-203ENST00000494014 CDC37L1Q7L3B6 337 aa8.14□□□□□ -1.11
EPHA3-203ENST00000494014 HDXQ7Z353 690 aa8.14□□□□□ -1.11
EPHA3-203ENST00000494014 NBPF11Q86T75 865 aa8.14□□□□□ -1.11
EPHA3-203ENST00000494014 ERC1Q8IUD2 1116 aa8.14□□□□□ -1.11
EPHA3-203ENST00000494014 DHX37Q8IY37 1157 aaKnown RBP8.14□□□□□ -1.11
EPHA3-203ENST00000494014 ACBD3Q9H3P7 528 aa8.14□□□□□ -1.11
EPHA3-203ENST00000494014 GPBP1L1Q9HC44 474 aaPredicted RBP8.14□□□□□ -1.11
EPHA3-203ENST00000494014 ZSWIM6Q9HCJ5 1215 aa8.14□□□□□ -1.11
EPHA3-203ENST00000494014 VPS18Q9P253 973 aa8.14□□□□□ -1.11
EPHA3-203ENST00000494014 MYH15Q9Y2K3 1946 aa8.14□□□□□ -1.11
EPHA3-203ENST00000494014 KLRG2A4D1S0 409 aaPredicted RBP8.14□□□□□ -1.11
EPHA3-203ENST00000494014 H3BQF6 201 aa8.14□□□□□ -1.11
EPHA3-203ENST00000494014 PPFIA4O75335 1185 aa8.14□□□□□ -1.11
EPHA3-203ENST00000494014 ERLIN1O75477 346 aa8.14□□□□□ -1.11
EPHA3-203ENST00000494014 TOMM70O94826 608 aa8.14□□□□□ -1.11
EPHA3-203ENST00000494014 CALRP27797 417 aaKnown RBP8.14□□□□□ -1.11
EPHA3-203ENST00000494014 IL6STP40189 918 aaPredicted RBP8.14□□□□□ -1.11
EPHA3-203ENST00000494014 TRIM65Q6PJ69 517 aa8.14□□□□□ -1.11
EPHA3-203ENST00000494014 RASEFQ8IZ41 740 aa8.14□□□□□ -1.11
EPHA3-203ENST00000494014 PGBD1Q96JS3 809 aa8.14□□□□□ -1.11
EPHA3-203ENST00000494014 UTP14AQ9BVJ6 771 aaKnown RBP8.14□□□□□ -1.11
EPHA3-203ENST00000494014 CFAP45Q9UL16 551 aa8.14□□□□□ -1.11
EPHA3-203ENST00000494014 DPEP1P16444 411 aa8.13□□□□□ -1.11
EPHA3-203ENST00000494014 PPP2R3AQ06190 1150 aa8.13□□□□□ -1.11
EPHA3-203ENST00000494014 GNL2Q13823 731 aaKnown RBP8.13□□□□□ -1.11
EPHA3-203ENST00000494014 KRT24Q2M2I5 525 aa8.13□□□□□ -1.11
EPHA3-203ENST00000494014 DNAJC21Q5F1R6 531 aaKnown RBP8.13□□□□□ -1.11
EPHA3-203ENST00000494014 TSHZ3Q63HK5 1081 aa8.13□□□□□ -1.11
EPHA3-203ENST00000494014 ARMCX5Q6P1M9 558 aa8.13□□□□□ -1.11
EPHA3-203ENST00000494014 RUFY2Q8WXA3 655 aa8.13□□□□□ -1.11
EPHA3-203ENST00000494014 KCNB2Q92953 911 aa8.13□□□□□ -1.11
EPHA3-203ENST00000494014 BPIFA3Q9BQP9 254 aa8.13□□□□□ -1.11
EPHA3-203ENST00000494014 PARD6BQ9BYG5 372 aa8.13□□□□□ -1.11
EPHA3-203ENST00000494014 KCNG1Q9UIX4 513 aa8.13□□□□□ -1.11
EPHA3-203ENST00000494014 CCDC88AQ3V6T2 1871 aa8.13□□□□□ -1.11
EPHA3-203ENST00000494014 SNED1Q8TER0 1413 aa8.13□□□□□ -1.11
EPHA3-203ENST00000494014 CARMIL3Q8ND23 1372 aa8.13□□□□□ -1.11
EPHA3-203ENST00000494014 TXLNAP40222 546 aa8.13□□□□□ -1.11
EPHA3-203ENST00000494014 MAP3K9P80192 1104 aa8.13□□□□□ -1.11
EPHA3-203ENST00000494014 ANKRD1Q15327 319 aa8.13□□□□□ -1.11
EPHA3-203ENST00000494014 HSP90AB3PQ58FF7 597 aa8.13□□□□□ -1.11
EPHA3-203ENST00000494014 TMC6Q7Z403 805 aa8.13□□□□□ -1.11
EPHA3-203ENST00000494014 FERMT3Q86UX7 667 aa8.13□□□□□ -1.11
EPHA3-203ENST00000494014 CNTROBQ8N137 903 aa8.13□□□□□ -1.11
EPHA3-203ENST00000494014 JMYQ8N9B5 988 aa8.13□□□□□ -1.11
EPHA3-203ENST00000494014 FAM71BQ8TC56 605 aa8.13□□□□□ -1.11
EPHA3-203ENST00000494014 E2F4Q16254 413 aa8.12□□□□□ -1.11
EPHA3-203ENST00000494014 ME3Q16798 604 aa8.12□□□□□ -1.11
EPHA3-203ENST00000494014 MTHFSDQ2M296 383 aaKnown RBP8.12□□□□□ -1.11
EPHA3-203ENST00000494014 DALRD3Q5D0E6 543 aaKnown RBP8.12□□□□□ -1.11
EPHA3-203ENST00000494014 CCDC73Q6ZRK6 1079 aa8.12□□□□□ -1.11
EPHA3-203ENST00000494014 CNPY4Q8N129 248 aa8.12□□□□□ -1.11
EPHA3-203ENST00000494014 PHACTR3Q96KR7 559 aa8.12□□□□□ -1.11
EPHA3-203ENST00000494014 LAMB2P55268 1798 aa8.12□□□□□ -1.11
EPHA3-203ENST00000494014 TUBBP07437 444 aa8.12□□□□□ -1.11
EPHA3-203ENST00000494014 USP5P45974 858 aa8.12□□□□□ -1.11
EPHA3-203ENST00000494014 ATP8B2P98198 1209 aa8.12□□□□□ -1.11
EPHA3-203ENST00000494014 ST3GAL1Q11201 340 aa8.12□□□□□ -1.11
EPHA3-203ENST00000494014 HSP90B2PQ58FF3 399 aa8.12□□□□□ -1.11
EPHA3-203ENST00000494014 CLEC4GQ6UXB4 293 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms