RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 ETFBKMTQ8IXQ9 262 aa8.62□□□□□ -1.03
TRA2B-216ENST00000493864 STRN4Q9NRL3 753 aa8.62□□□□□ -1.03
TRA2B-216ENST00000493864 SLIT2O94813 1529 aa8.62□□□□□ -1.03
TRA2B-216ENST00000493864 ATRNO75882 1429 aa8.62□□□□□ -1.03
TRA2B-216ENST00000493864 SOWAHDA6NJG2 315 aa8.61□□□□□ -1.03
TRA2B-216ENST00000493864 H3BM21 787 aa8.61□□□□□ -1.03
TRA2B-216ENST00000493864 GPR25O00155 361 aa8.61□□□□□ -1.03
TRA2B-216ENST00000493864 TERTO14746 1132 aaKnown RBP8.61□□□□□ -1.03
TRA2B-216ENST00000493864 ZBTB39O15060 712 aa8.61□□□□□ -1.03
TRA2B-216ENST00000493864 MICAL2O94851 1124 aa8.61□□□□□ -1.03
TRA2B-216ENST00000493864 BTLAQ7Z6A9 289 aa8.61□□□□□ -1.03
TRA2B-216ENST00000493864 TCP11L2Q8N4U5 519 aa8.61□□□□□ -1.03
TRA2B-216ENST00000493864 CEP63Q96MT8 703 aa8.61□□□□□ -1.03
TRA2B-216ENST00000493864 PNNQ9H307 717 aaKnown RBP8.61□□□□□ -1.03
TRA2B-216ENST00000493864 RRP7AQ9Y3A4 280 aaKnown RBP8.61□□□□□ -1.03
TRA2B-216ENST00000493864 DCDC2BA2VCK2 349 aa8.6□□□□□ -1.03
TRA2B-216ENST00000493864 FAM13AO94988 1023 aa8.6□□□□□ -1.03
TRA2B-216ENST00000493864 IDH3AP50213 366 aa8.6□□□□□ -1.03
TRA2B-216ENST00000493864 UBAP2LQ14157 1087 aaKnown RBP8.6□□□□□ -1.03
TRA2B-216ENST00000493864 SAMD5Q5TGI4 173 aa8.6□□□□□ -1.03
TRA2B-216ENST00000493864 IER5Q5VY09 327 aa8.6□□□□□ -1.03
TRA2B-216ENST00000493864 FOXR1Q6PIV2 292 aa8.6□□□□□ -1.03
TRA2B-216ENST00000493864 TOM1L2Q6ZVM7 507 aa8.6□□□□□ -1.03
TRA2B-216ENST00000493864 NPAS3Q8IXF0 933 aa8.6□□□□□ -1.03
TRA2B-216ENST00000493864 NANOS1Q8WY41 292 aaKnown RBP8.6□□□□□ -1.03
TRA2B-216ENST00000493864 GZF1Q9H116 711 aaPredicted RBP8.6□□□□□ -1.03
TRA2B-216ENST00000493864 BIN2Q9UBW5 565 aaPredicted RBP8.6□□□□□ -1.03
TRA2B-216ENST00000493864 DMGDHQ9UI17 866 aaKnown RBP8.6□□□□□ -1.03
TRA2B-216ENST00000493864 PCDHGC4Q9Y5F7 938 aa8.6□□□□□ -1.03
TRA2B-216ENST00000493864 RGPD2P0DJD1 1756 aa8.6□□□□□ -1.03
TRA2B-216ENST00000493864 RGPD1P0DJD0 1748 aa8.6□□□□□ -1.03
TRA2B-216ENST00000493864 LMO7Q8WWI1 1683 aa8.59□□□□□ -1.03
TRA2B-216ENST00000493864 WDR17Q8IZU2 1322 aa8.59□□□□□ -1.03
TRA2B-216ENST00000493864 KHNYNO15037 678 aaKnown RBP8.59□□□□□ -1.03
TRA2B-216ENST00000493864 BNIP3LO60238 219 aa8.59□□□□□ -1.03
TRA2B-216ENST00000493864 TMPOP42166 694 aaKnown RBP8.59□□□□□ -1.03
TRA2B-216ENST00000493864 RBM6P78332 1123 aaKnown RBP8.59□□□□□ -1.03
TRA2B-216ENST00000493864 TYRO3Q06418 890 aa8.59□□□□□ -1.03
TRA2B-216ENST00000493864 AAMPQ13685 434 aa8.59□□□□□ -1.03
TRA2B-216ENST00000493864 NOM1Q5C9Z4 860 aaKnown RBP8.59□□□□□ -1.03
TRA2B-216ENST00000493864 SLC16A10Q8TF71 515 aa8.59□□□□□ -1.03
TRA2B-216ENST00000493864 ABHD17AQ96GS6 310 aa8.59□□□□□ -1.03
TRA2B-216ENST00000493864 TRERF1Q96PN7 1200 aa8.59□□□□□ -1.03
TRA2B-216ENST00000493864 CARD10Q9BWT7 1032 aa8.59□□□□□ -1.03
TRA2B-216ENST00000493864 TRPC5Q9UL62 973 aaPredicted RBP8.59□□□□□ -1.03
TRA2B-216ENST00000493864 KDRP35968 1356 aa8.59□□□□□ -1.03
TRA2B-216ENST00000493864 COL5A2P05997 1499 aaPredicted RBP8.58□□□□□ -1.04
TRA2B-216ENST00000493864 MAPK8IP3Q9UPT6 1336 aa8.58□□□□□ -1.04
TRA2B-216ENST00000493864 ZAP70P43403 619 aa8.58□□□□□ -1.04
TRA2B-216ENST00000493864 EIF1AXP47813 144 aaKnown RBP8.58□□□□□ -1.04
TRA2B-216ENST00000493864 NFE2L2Q16236 605 aa8.58□□□□□ -1.04
TRA2B-216ENST00000493864 ATCAYQ86WG3 371 aa8.58□□□□□ -1.04
TRA2B-216ENST00000493864 BRD7Q9NPI1 651 aa8.58□□□□□ -1.04
TRA2B-216ENST00000493864 ABCC6O95255 1503 aa8.58□□□□□ -1.04
TRA2B-216ENST00000493864 NEFMP07197 916 aa8.57□□□□□ -1.04
TRA2B-216ENST00000493864 FAM157BP0CG42 384 aa8.57□□□□□ -1.04
TRA2B-216ENST00000493864 MAPTP10636 758 aaKnown RBP8.57□□□□□ -1.04
TRA2B-216ENST00000493864 NPR3P17342 541 aa8.57□□□□□ -1.04
TRA2B-216ENST00000493864 RIPK4P57078 832 aa8.57□□□□□ -1.04
TRA2B-216ENST00000493864 TNP2Q05952 138 aa8.57□□□□□ -1.04
TRA2B-216ENST00000493864 MTHFSDQ2M296 383 aaKnown RBP8.57□□□□□ -1.04
TRA2B-216ENST00000493864 UNC5CLQ8IV45 518 aa8.57□□□□□ -1.04
TRA2B-216ENST00000493864 USP35Q9P2H5 1018 aa8.57□□□□□ -1.04
TRA2B-216ENST00000493864 WNK3Q9BYP7 1800 aa8.57□□□□□ -1.04
TRA2B-216ENST00000493864 NCAPD2Q15021 1401 aa8.56□□□□□ -1.04
TRA2B-216ENST00000493864 OPLAHO14841 1288 aa8.56□□□□□ -1.04
TRA2B-216ENST00000493864 INPP5BP32019 993 aa8.56□□□□□ -1.04
TRA2B-216ENST00000493864 ARSDP51689 593 aa8.56□□□□□ -1.04
TRA2B-216ENST00000493864 PLEKHO1Q53GL0 409 aaPredicted RBP8.56□□□□□ -1.04
TRA2B-216ENST00000493864 ALKBH2Q6NS38 261 aa8.56□□□□□ -1.04
TRA2B-216ENST00000493864 RGL4Q8IZJ4 473 aa8.56□□□□□ -1.04
TRA2B-216ENST00000493864 GPR161Q8N6U8 529 aaKnown RBP8.56□□□□□ -1.04
TRA2B-216ENST00000493864 RAPGEF4Q8WZA2 1011 aa8.56□□□□□ -1.04
TRA2B-216ENST00000493864 NDFIP2Q9NV92 336 aa8.56□□□□□ -1.04
TRA2B-216ENST00000493864 ATXN7L1Q9ULK2 861 aaPredicted RBP8.56□□□□□ -1.04
TRA2B-216ENST00000493864 PHF24Q9UPV7 400 aa8.56□□□□□ -1.04
TRA2B-216ENST00000493864 USP20Q9Y2K6 914 aa8.56□□□□□ -1.04
TRA2B-216ENST00000493864 CCDC9Q9Y3X0 531 aaKnown RBP8.56□□□□□ -1.04
TRA2B-216ENST00000493864 ERBB4Q15303 1308 aa8.55□□□□□ -1.04
TRA2B-216ENST00000493864 ZBED9Q6R2W3 1325 aa8.55□□□□□ -1.04
TRA2B-216ENST00000493864 CRB1P82279 1406 aa8.55□□□□□ -1.04
TRA2B-216ENST00000493864 EFSO43281 561 aa8.55□□□□□ -1.04
TRA2B-216ENST00000493864 SFSWAPQ12872 951 aaKnown RBP8.55□□□□□ -1.04
TRA2B-216ENST00000493864 ECM1Q16610 540 aa8.55□□□□□ -1.04
TRA2B-216ENST00000493864 NGEFQ8N5V2 710 aa8.55□□□□□ -1.04
TRA2B-216ENST00000493864 GPR152Q8TDT2 470 aa8.55□□□□□ -1.04
TRA2B-216ENST00000493864 CFHR5Q9BXR6 569 aa8.55□□□□□ -1.04
TRA2B-216ENST00000493864 SPATA31A5Q5VU36 1347 aa8.54□□□□□ -1.04
TRA2B-216ENST00000493864 SPATA31A7Q8IWB4 1347 aa8.54□□□□□ -1.04
TRA2B-216ENST00000493864 THSD7AQ9UPZ6 1657 aa8.54□□□□□ -1.04
TRA2B-216ENST00000493864 IL2RBP14784 551 aa8.54□□□□□ -1.04
TRA2B-216ENST00000493864 EPB42P16452 691 aa8.54□□□□□ -1.04
TRA2B-216ENST00000493864 CD33P20138 364 aa8.54□□□□□ -1.04
TRA2B-216ENST00000493864 FGFR3P22607 806 aa8.54□□□□□ -1.04
TRA2B-216ENST00000493864 ARHGAP4P98171 946 aa8.54□□□□□ -1.04
TRA2B-216ENST00000493864 DNM1Q05193 864 aaKnown RBP8.54□□□□□ -1.04
TRA2B-216ENST00000493864 DCTN1Q14203 1278 aa8.54□□□□□ -1.04
TRA2B-216ENST00000493864 VPS72Q15906 364 aa8.54□□□□□ -1.04
TRA2B-216ENST00000493864 CCDC27Q2M243 656 aa8.54□□□□□ -1.04
TRA2B-216ENST00000493864 AMOTQ4VCS5 1084 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms