RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 DLGAP3O95886 979 aa7.4□□□□□ -1.22
CLIP4-212ENST00000493551 RFX1P22670 979 aa7.4□□□□□ -1.22
CLIP4-212ENST00000493551 SOX4Q06945 474 aaPredicted RBP7.4□□□□□ -1.22
CLIP4-212ENST00000493551 MLECQ14165 292 aa7.4□□□□□ -1.22
CLIP4-212ENST00000493551 KRTAP19-4Q3LI73 84 aa7.4□□□□□ -1.22
CLIP4-212ENST00000493551 CAPN12Q6ZSI9 719 aa7.4□□□□□ -1.22
CLIP4-212ENST00000493551 KSR1Q8IVT5 923 aa7.4□□□□□ -1.22
CLIP4-212ENST00000493551 BCL7CQ8WUZ0 217 aaPredicted RBP7.4□□□□□ -1.22
CLIP4-212ENST00000493551 HHIPQ96QV1 700 aa7.4□□□□□ -1.22
CLIP4-212ENST00000493551 MAGI3Q5TCQ9 1506 aa7.4□□□□□ -1.22
CLIP4-212ENST00000493551 PCF11O94913 1555 aaKnown RBP7.4□□□□□ -1.22
CLIP4-212ENST00000493551 CFAP43Q8NDM7 1665 aa7.4□□□□□ -1.23
CLIP4-212ENST00000493551 RIMS1Q86UR5 1692 aaKnown RBP7.39□□□□□ -1.23
CLIP4-212ENST00000493551 RAPGEF2Q9Y4G8 1499 aa7.39□□□□□ -1.23
CLIP4-212ENST00000493551 KRTAP9-7A8MTY7 169 aa7.39□□□□□ -1.23
CLIP4-212ENST00000493551 RPLP1P05386 114 aaKnown RBP7.39□□□□□ -1.23
CLIP4-212ENST00000493551 MAP7Q14244 749 aa7.39□□□□□ -1.23
CLIP4-212ENST00000493551 ZNF765Q7L2R6 523 aa7.39□□□□□ -1.23
CLIP4-212ENST00000493551 VN1R5Q7Z5H4 357 aa7.39□□□□□ -1.23
CLIP4-212ENST00000493551 ATG4DQ86TL0 474 aaPredicted RBP7.39□□□□□ -1.23
CLIP4-212ENST00000493551 CLUAP1Q96AJ1 413 aa7.39□□□□□ -1.23
CLIP4-212ENST00000493551 NUDT16Q96DE0 195 aaKnown RBP7.39□□□□□ -1.23
CLIP4-212ENST00000493551 MKNK1Q9BUB5 465 aa7.39□□□□□ -1.23
CLIP4-212ENST00000493551 ADAMTSL3P82987 1691 aa7.38□□□□□ -1.23
CLIP4-212ENST00000493551 ZBTB39O15060 712 aa7.38□□□□□ -1.23
CLIP4-212ENST00000493551 EIF4EBP3O60516 100 aaPredicted RBP7.38□□□□□ -1.23
CLIP4-212ENST00000493551 NAA30Q147X3 362 aaPredicted RBP7.38□□□□□ -1.23
CLIP4-212ENST00000493551 C1orf127Q8N9H9 656 aa7.38□□□□□ -1.23
CLIP4-212ENST00000493551 SLC38A3Q99624 504 aa7.38□□□□□ -1.23
CLIP4-212ENST00000493551 ABCA8O94911 1581 aa7.37□□□□□ -1.23
CLIP4-212ENST00000493551 ADH5P11766 374 aa7.37□□□□□ -1.23
CLIP4-212ENST00000493551 TMEM132AQ24JP5 1023 aa7.37□□□□□ -1.23
CLIP4-212ENST00000493551 CFAP70Q5T0N1 1121 aa7.37□□□□□ -1.23
CLIP4-212ENST00000493551 XKR5Q6UX68 686 aa7.37□□□□□ -1.23
CLIP4-212ENST00000493551 ZNF574Q6ZN55 896 aaPredicted RBP7.37□□□□□ -1.23
CLIP4-212ENST00000493551 WFDC3Q8IUB2 231 aa7.37□□□□□ -1.23
CLIP4-212ENST00000493551 CCER1Q8TC90 406 aaPredicted RBP7.37□□□□□ -1.23
CLIP4-212ENST00000493551 FAM168AQ92567 244 aa7.37□□□□□ -1.23
CLIP4-212ENST00000493551 PMEPA1Q969W9 287 aa7.37□□□□□ -1.23
CLIP4-212ENST00000493551 NXPE3Q969Y0 559 aa7.37□□□□□ -1.23
CLIP4-212ENST00000493551 CXXC1Q9P0U4 656 aaPredicted RBP7.37□□□□□ -1.23
CLIP4-212ENST00000493551 BCORL1Q5H9F3 1711 aa7.36□□□□□ -1.23
CLIP4-212ENST00000493551 TMEM40Q8WWA1 233 aa7.36□□□□□ -1.23
CLIP4-212ENST00000493551 MISP3Q96FF7 219 aa7.36□□□□□ -1.23
CLIP4-212ENST00000493551 OSMRQ99650 979 aa7.36□□□□□ -1.23
CLIP4-212ENST00000493551 ACTL7BQ9Y614 415 aa7.36□□□□□ -1.23
CLIP4-212ENST00000493551 CTTNBP2Q8WZ74 1663 aa7.35□□□□□ -1.23
CLIP4-212ENST00000493551 FRMPD1Q5SYB0 1578 aa7.35□□□□□ -1.23
CLIP4-212ENST00000493551 NFICP08651 508 aa7.35□□□□□ -1.23
CLIP4-212ENST00000493551 RAB6AP20340 208 aa7.35□□□□□ -1.23
CLIP4-212ENST00000493551 CDCA8Q53HL2 280 aa7.35□□□□□ -1.23
CLIP4-212ENST00000493551 GLIS3Q8NEA6 775 aa7.35□□□□□ -1.23
CLIP4-212ENST00000493551 SEMA6CQ9H3T2 930 aa7.35□□□□□ -1.23
CLIP4-212ENST00000493551 ARAP3Q8WWN8 1544 aa7.34□□□□□ -1.23
CLIP4-212ENST00000493551 ESRRAP11474 423 aaPredicted RBP7.34□□□□□ -1.23
CLIP4-212ENST00000493551 SPRED2Q7Z698 418 aa7.34□□□□□ -1.23
CLIP4-212ENST00000493551 ZKSCAN3Q9BRR0 538 aa7.34□□□□□ -1.23
CLIP4-212ENST00000493551 RC3H2Q9HBD1 1191 aaKnown RBP7.34□□□□□ -1.23
CLIP4-212ENST00000493551 ATP10BO94823 1461 aa7.34□□□□□ -1.23
CLIP4-212ENST00000493551 GOLGA3Q08378 1498 aa7.33□□□□□ -1.24
CLIP4-212ENST00000493551 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.33□□□□□ -1.24
CLIP4-212ENST00000493551 FUT4P22083 530 aa7.33□□□□□ -1.24
CLIP4-212ENST00000493551 GSTM4Q03013 218 aa7.33□□□□□ -1.24
CLIP4-212ENST00000493551 BHLHE22Q8NFJ8 381 aaPredicted RBP7.33□□□□□ -1.24
CLIP4-212ENST00000493551 CHRDQ9H2X0 955 aa7.33□□□□□ -1.24
CLIP4-212ENST00000493551 PCSK2P16519 638 aa7.32□□□□□ -1.24
CLIP4-212ENST00000493551 CEBPAP49715 358 aaPredicted RBP7.32□□□□□ -1.24
CLIP4-212ENST00000493551 ELOAQ14241 798 aaKnown RBP7.32□□□□□ -1.24
CLIP4-212ENST00000493551 HP1BP3Q5SSJ5 553 aaPredicted RBP7.32□□□□□ -1.24
CLIP4-212ENST00000493551 ASAP3Q8TDY4 903 aa7.32□□□□□ -1.24
CLIP4-212ENST00000493551 BHLHE41Q9C0J9 482 aaPredicted RBP7.32□□□□□ -1.24
CLIP4-212ENST00000493551 ACSS3Q9H6R3 686 aa7.32□□□□□ -1.24
CLIP4-212ENST00000493551 ZMIZ1Q9ULJ6 1067 aa7.32□□□□□ -1.24
CLIP4-212ENST00000493551 LCE5AQ5TCM9 118 aa7.31□□□□□ -1.24
CLIP4-212ENST00000493551 OGFOD3Q6PK18 319 aa7.31□□□□□ -1.24
CLIP4-212ENST00000493551 TTC16Q8NEE8 873 aa7.31□□□□□ -1.24
CLIP4-212ENST00000493551 FAM84AQ96KN4 292 aa7.31□□□□□ -1.24
CLIP4-212ENST00000493551 SIGLEC1Q9BZZ2 1709 aa7.31□□□□□ -1.24
CLIP4-212ENST00000493551 NRSN2Q9GZP1 204 aa7.31□□□□□ -1.24
CLIP4-212ENST00000493551 YEATS2Q9ULM3 1422 aa7.31□□□□□ -1.24
CLIP4-212ENST00000493551 ARHGEF40Q8TER5 1519 aa7.31□□□□□ -1.24
CLIP4-212ENST00000493551 ABCA9Q8IUA7 1624 aa7.3□□□□□ -1.24
CLIP4-212ENST00000493551 SPATA31D1Q6ZQQ2 1576 aa7.3□□□□□ -1.24
CLIP4-212ENST00000493551 RNASE1P07998 156 aaKnown RBP7.3□□□□□ -1.24
CLIP4-212ENST00000493551 EDN3P14138 238 aa7.3□□□□□ -1.24
CLIP4-212ENST00000493551 CYP27C1Q4G0S4 372 aa7.3□□□□□ -1.24
CLIP4-212ENST00000493551 SEZ6L2Q6UXD5 910 aa7.3□□□□□ -1.24
CLIP4-212ENST00000493551 DYMQ7RTS9 669 aa7.3□□□□□ -1.24
CLIP4-212ENST00000493551 ATCAYQ86WG3 371 aa7.3□□□□□ -1.24
CLIP4-212ENST00000493551 EDEM1Q92611 657 aa7.3□□□□□ -1.24
CLIP4-212ENST00000493551 C1GALT1Q9NS00 363 aa7.3□□□□□ -1.24
CLIP4-212ENST00000493551 FAM105AQ9NUU6 356 aa7.3□□□□□ -1.24
CLIP4-212ENST00000493551 MESP2Q0VG99 397 aa7.29□□□□□ -1.24
CLIP4-212ENST00000493551 BNIP3Q12983 259 aa7.29□□□□□ -1.24
CLIP4-212ENST00000493551 TOX2Q96NM4 488 aa7.29□□□□□ -1.24
CLIP4-212ENST00000493551 MBNL3Q9NUK0 354 aaKnown RBP7.29□□□□□ -1.24
CLIP4-212ENST00000493551 DENND4BO75064 1496 aaPredicted RBP7.29□□□□□ -1.24
CLIP4-212ENST00000493551 ZNF865P0CJ78 1059 aaPredicted RBP7.28□□□□□ -1.24
CLIP4-212ENST00000493551 CD8BP10966 210 aa7.28□□□□□ -1.24
CLIP4-212ENST00000493551 NETO1Q8TDF5 533 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms