RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 GPR108Q9NPR9 543 aa16.72■□□□□ 0.27
IRF1-210ENST00000493208 TIMM10P62072 90 aa16.71■□□□□ 0.27
IRF1-210ENST00000493208 ATP8B2P98198 1209 aa16.71■□□□□ 0.27
IRF1-210ENST00000493208 FAM151AQ8WW52 585 aa16.71■□□□□ 0.27
IRF1-210ENST00000493208 MCOLN1Q9GZU1 580 aa16.71■□□□□ 0.27
IRF1-210ENST00000493208 CCDC85CA6NKD9 419 aa16.7■□□□□ 0.26
IRF1-210ENST00000493208 HMMRO75330 724 aa16.7■□□□□ 0.26
IRF1-210ENST00000493208 SURF6O75683 361 aaKnown RBP16.7■□□□□ 0.26
IRF1-210ENST00000493208 PRDX5P30044 214 aa16.7■□□□□ 0.26
IRF1-210ENST00000493208 TTC39AQ5SRH9 613 aa16.7■□□□□ 0.26
IRF1-210ENST00000493208 OPTNQ96CV9 577 aa16.7■□□□□ 0.26
IRF1-210ENST00000493208 USP40Q9NVE5 1235 aa16.7■□□□□ 0.26
IRF1-210ENST00000493208 DAGLAQ9Y4D2 1042 aa16.7■□□□□ 0.26
IRF1-210ENST00000493208 MYH13Q9UKX3 1938 aa16.69■□□□□ 0.26
IRF1-210ENST00000493208 FKTNO75072 461 aa16.69■□□□□ 0.26
IRF1-210ENST00000493208 RASGRF1Q13972 1273 aa16.69■□□□□ 0.26
IRF1-210ENST00000493208 IFNL1Q8IU54 200 aa16.69■□□□□ 0.26
IRF1-210ENST00000493208 SPATA5Q8NB90 893 aa16.69■□□□□ 0.26
IRF1-210ENST00000493208 TEPSINQ96N21 525 aa16.69■□□□□ 0.26
IRF1-210ENST00000493208 WRNIP1Q96S55 665 aa16.69■□□□□ 0.26
IRF1-210ENST00000493208 ELP3Q9H9T3 547 aa16.69■□□□□ 0.26
IRF1-210ENST00000493208 DDX19BQ9UMR2 479 aa16.69■□□□□ 0.26
IRF1-210ENST00000493208 PNMA6EA0A0J9YXQ4 647 aa16.68■□□□□ 0.26
IRF1-210ENST00000493208 GPR25O00155 361 aa16.68■□□□□ 0.26
IRF1-210ENST00000493208 ENTPD3O75355 529 aa16.68■□□□□ 0.26
IRF1-210ENST00000493208 TBC1D8O95759 1140 aa16.68■□□□□ 0.26
IRF1-210ENST00000493208 ADORA1P30542 326 aa16.68■□□□□ 0.26
IRF1-210ENST00000493208 POLA2Q14181 598 aa16.68■□□□□ 0.26
IRF1-210ENST00000493208 GRIK5Q16478 980 aa16.68■□□□□ 0.26
IRF1-210ENST00000493208 CDC42EP5Q6NZY7 148 aa16.68■□□□□ 0.26
IRF1-210ENST00000493208 ERO1BQ86YB8 467 aa16.68■□□□□ 0.26
IRF1-210ENST00000493208 ZSCAN29Q8IWY8 852 aaPredicted RBP16.68■□□□□ 0.26
IRF1-210ENST00000493208 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.68■□□□□ 0.26
IRF1-210ENST00000493208 SSH3Q8TE77 659 aa16.68■□□□□ 0.26
IRF1-210ENST00000493208 CLMNQ96JQ2 1002 aa16.68■□□□□ 0.26
IRF1-210ENST00000493208 LRP2BPQ9P2M1 347 aa16.68■□□□□ 0.26
IRF1-210ENST00000493208 SSC5DA1L4H1 1573 aa16.68■□□□□ 0.26
IRF1-210ENST00000493208 ZBTB7BO15156 539 aaPredicted RBP16.67■□□□□ 0.26
IRF1-210ENST00000493208 BAG3O95817 575 aa16.67■□□□□ 0.26
IRF1-210ENST00000493208 CETPP11597 493 aa16.67■□□□□ 0.26
IRF1-210ENST00000493208 PLCG2P16885 1265 aa16.67■□□□□ 0.26
IRF1-210ENST00000493208 ARID4AP29374 1257 aaPredicted RBP16.67■□□□□ 0.26
IRF1-210ENST00000493208 CACNB3P54284 484 aa16.67■□□□□ 0.26
IRF1-210ENST00000493208 VGLL4Q14135 290 aa16.67■□□□□ 0.26
IRF1-210ENST00000493208 DIXDC1Q155Q3 683 aa16.67■□□□□ 0.26
IRF1-210ENST00000493208 CERS3Q8IU89 383 aa16.67■□□□□ 0.26
IRF1-210ENST00000493208 FAM163AQ96GL9 167 aaPredicted RBP16.67■□□□□ 0.26
IRF1-210ENST00000493208 ERO1AQ96HE7 468 aa16.67■□□□□ 0.26
IRF1-210ENST00000493208 ZCCHC17Q9NP64 241 aaKnown RBP16.67■□□□□ 0.26
IRF1-210ENST00000493208 RAI14Q9P0K7 980 aa16.67■□□□□ 0.26
IRF1-210ENST00000493208 SNAPC2Q13487 334 aa16.66■□□□□ 0.26
IRF1-210ENST00000493208 TNNI3KQ59H18 835 aa16.66■□□□□ 0.26
IRF1-210ENST00000493208 TMED8Q6PL24 325 aaPredicted RBP16.66■□□□□ 0.26
IRF1-210ENST00000493208 ZNF296Q8WUU4 475 aaPredicted RBP16.66■□□□□ 0.26
IRF1-210ENST00000493208 OTUD5Q96G74 571 aa16.66■□□□□ 0.26
IRF1-210ENST00000493208 IDI2Q9BXS1 227 aa16.66■□□□□ 0.26
IRF1-210ENST00000493208 ZFYVE28Q9HCC9 887 aa16.66■□□□□ 0.26
IRF1-210ENST00000493208 FZD1Q9UP38 647 aa16.66■□□□□ 0.26
IRF1-210ENST00000493208 FPGT-TNNI3KV9GXZ4 949 aa16.66■□□□□ 0.26
IRF1-210ENST00000493208 MROH7-TTC4A0A0A0MT08 1334 aa16.66■□□□□ 0.26
IRF1-210ENST00000493208 GAKO14976 1311 aa16.66■□□□□ 0.26
IRF1-210ENST00000493208 SPDYE5A6NIY4 337 aa16.65■□□□□ 0.26
IRF1-210ENST00000493208 PPATQ06203 517 aa16.65■□□□□ 0.26
IRF1-210ENST00000493208 TCP10Q12799 353 aa16.65■□□□□ 0.26
IRF1-210ENST00000493208 PICK1Q9NRD5 415 aa16.65■□□□□ 0.26
IRF1-210ENST00000493208 NOP58Q9Y2X3 529 aaKnown RBP16.65■□□□□ 0.26
IRF1-210ENST00000493208 AOX1Q06278 1338 aa16.65■□□□□ 0.26
IRF1-210ENST00000493208 CCL15-CCL14A0A0B4J2E2 113 aa16.64■□□□□ 0.25
IRF1-210ENST00000493208 TESPA1A2RU30 521 aaPredicted RBP16.64■□□□□ 0.25
IRF1-210ENST00000493208 BTDP43251 543 aa16.64■□□□□ 0.25
IRF1-210ENST00000493208 PPIL2Q13356 520 aa16.64■□□□□ 0.25
IRF1-210ENST00000493208 CCL15Q16663 113 aa16.64■□□□□ 0.25
IRF1-210ENST00000493208 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.64■□□□□ 0.25
IRF1-210ENST00000493208 RPAP2Q8IXW5 612 aaPredicted RBP16.64■□□□□ 0.25
IRF1-210ENST00000493208 ZNF512BQ96KM6 892 aaPredicted RBP16.64■□□□□ 0.25
IRF1-210ENST00000493208 HMG20BQ9P0W2 317 aa16.64■□□□□ 0.25
IRF1-210ENST00000493208 RCAN3Q9UKA8 241 aa16.64■□□□□ 0.25
IRF1-210ENST00000493208 TNNQ9UQP3 1299 aa16.64■□□□□ 0.25
IRF1-210ENST00000493208 NPM3O75607 178 aaKnown RBP16.63■□□□□ 0.25
IRF1-210ENST00000493208 MECOMQ03112 1051 aa16.63■□□□□ 0.25
IRF1-210ENST00000493208 KIF22Q14807 665 aa16.63■□□□□ 0.25
IRF1-210ENST00000493208 C1orf115Q9H7X2 142 aa16.63■□□□□ 0.25
IRF1-210ENST00000493208 GPR75-ASB3A0A0A6YYF3 556 aa16.62■□□□□ 0.25
IRF1-210ENST00000493208 RGS3P49796 1198 aa16.62■□□□□ 0.25
IRF1-210ENST00000493208 TAF1CQ15572 869 aaPredicted RBP16.62■□□□□ 0.25
IRF1-210ENST00000493208 NAA16Q6N069 864 aaPredicted RBP16.62■□□□□ 0.25
IRF1-210ENST00000493208 FBXO46Q6PJ61 603 aaPredicted RBP16.62■□□□□ 0.25
IRF1-210ENST00000493208 MIGA2Q7L4E1 593 aa16.62■□□□□ 0.25
IRF1-210ENST00000493208 CEP85Q6P2H3 762 aa16.61■□□□□ 0.25
IRF1-210ENST00000493208 CLASRPQ8N2M8 674 aaKnown RBP16.61■□□□□ 0.25
IRF1-210ENST00000493208 TRIM34Q9BYJ4 488 aa16.61■□□□□ 0.25
IRF1-210ENST00000493208 CASP8AP2Q9UKL3 1982 aa16.6■□□□□ 0.25
IRF1-210ENST00000493208 IGF2BP3O00425 579 aaKnown RBP eCLIP16.6■□□□□ 0.25
IRF1-210ENST00000493208 RLBP1P12271 317 aa16.6■□□□□ 0.25
IRF1-210ENST00000493208 MCAMP43121 646 aa16.6■□□□□ 0.25
IRF1-210ENST00000493208 SP3Q02447 781 aa16.6■□□□□ 0.25
IRF1-210ENST00000493208 MLLT1Q03111 559 aaPredicted RBP16.6■□□□□ 0.25
IRF1-210ENST00000493208 NFIAQ12857 509 aa16.6■□□□□ 0.25
IRF1-210ENST00000493208 PICALMQ13492 652 aa16.6■□□□□ 0.25
IRF1-210ENST00000493208 NOL9Q5SY16 702 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms