RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 TTC21BQ7Z4L5 1316 aa5.92□□□□□ -1.46
UBR4-215ENST00000492606 PTPN13Q12923 2485 aa5.91□□□□□ -1.46
UBR4-215ENST00000492606 CACNA1HO95180 2353 aa5.91□□□□□ -1.46
UBR4-215ENST00000492606 CARNS1A5YM72 827 aa5.91□□□□□ -1.46
UBR4-215ENST00000492606 GOLGA8CPA6NN73 597 aa5.91□□□□□ -1.46
UBR4-215ENST00000492606 ZBBXA8MT70 800 aa5.91□□□□□ -1.46
UBR4-215ENST00000492606 PIK3CDO00329 1044 aa5.91□□□□□ -1.46
UBR4-215ENST00000492606 IGF2BP3O00425 579 aaKnown RBP eCLIP5.91□□□□□ -1.46
UBR4-215ENST00000492606 ALDH1A1P00352 501 aa5.91□□□□□ -1.46
UBR4-215ENST00000492606 EGFRP00533 1210 aa5.91□□□□□ -1.46
UBR4-215ENST00000492606 CCL5P13501 91 aa5.91□□□□□ -1.46
UBR4-215ENST00000492606 CRKLP46109 303 aaKnown RBP5.91□□□□□ -1.46
UBR4-215ENST00000492606 TFF2Q03403 129 aa5.91□□□□□ -1.46
UBR4-215ENST00000492606 CXCL9Q07325 125 aa5.91□□□□□ -1.46
UBR4-215ENST00000492606 CRHR2Q13324 411 aa5.91□□□□□ -1.46
UBR4-215ENST00000492606 PTCRAQ6ISU1 281 aaPredicted RBP5.91□□□□□ -1.46
UBR4-215ENST00000492606 PRR5LQ6MZQ0 368 aa5.91□□□□□ -1.46
UBR4-215ENST00000492606 RTKN2Q8IZC4 609 aa5.91□□□□□ -1.46
UBR4-215ENST00000492606 CDCA5Q96FF9 252 aa5.91□□□□□ -1.46
UBR4-215ENST00000492606 MASTLQ96GX5 879 aa5.91□□□□□ -1.46
UBR4-215ENST00000492606 PAWRQ96IZ0 340 aaKnown RBP5.91□□□□□ -1.46
UBR4-215ENST00000492606 SPSB2Q99619 263 aa5.91□□□□□ -1.46
UBR4-215ENST00000492606 MAFBQ9Y5Q3 323 aaPredicted RBP5.91□□□□□ -1.46
UBR4-215ENST00000492606 RAB3GAP2Q9H2M9 1393 aa5.91□□□□□ -1.46
UBR4-215ENST00000492606 ANKRD17O75179 2603 aaKnown RBP5.91□□□□□ -1.46
UBR4-215ENST00000492606 SPTBN2O15020 2390 aa5.91□□□□□ -1.46
UBR4-215ENST00000492606 DNAH12Q6ZR08 3092 aa5.9□□□□□ -1.46
UBR4-215ENST00000492606 TLL1O43897 1013 aa5.9□□□□□ -1.46
UBR4-215ENST00000492606 ZPR1O75312 459 aa5.9□□□□□ -1.46
UBR4-215ENST00000492606 COPS2P61201 443 aa5.9□□□□□ -1.46
UBR4-215ENST00000492606 KCNH2Q12809 1159 aa5.9□□□□□ -1.46
UBR4-215ENST00000492606 CCDC85BQ15834 202 aaPredicted RBP5.9□□□□□ -1.46
UBR4-215ENST00000492606 USHBP1Q8N6Y0 703 aa5.9□□□□□ -1.46
UBR4-215ENST00000492606 PRSS33Q8NF86 280 aa5.9□□□□□ -1.46
UBR4-215ENST00000492606 DIS3LQ8TF46 1054 aaKnown RBP5.9□□□□□ -1.46
UBR4-215ENST00000492606 CD320Q9NPF0 282 aa5.9□□□□□ -1.46
UBR4-215ENST00000492606 ASPMQ8IZT6 3477 aa5.9□□□□□ -1.46
UBR4-215ENST00000492606 PCDH11XQ9BZA7 1347 aa5.9□□□□□ -1.47
UBR4-215ENST00000492606 PCDH11YQ9BZA8 1340 aa5.9□□□□□ -1.47
UBR4-215ENST00000492606 NPC1L1Q9UHC9 1359 aa5.9□□□□□ -1.47
UBR4-215ENST00000492606 HELZ2Q9BYK8 2649 aaKnown RBP5.9□□□□□ -1.47
UBR4-215ENST00000492606 SGPL1O95470 568 aa5.89□□□□□ -1.47
UBR4-215ENST00000492606 INTS5Q6P9B9 1019 aaKnown RBP5.89□□□□□ -1.47
UBR4-215ENST00000492606 SLC51AQ86UW1 340 aa5.89□□□□□ -1.47
UBR4-215ENST00000492606 PHTF2Q8N3S3 785 aa5.89□□□□□ -1.47
UBR4-215ENST00000492606 FAM174AQ8TBP5 190 aa5.89□□□□□ -1.47
UBR4-215ENST00000492606 ZNF516Q92618 1163 aa5.89□□□□□ -1.47
UBR4-215ENST00000492606 PSMD1Q99460 953 aa5.89□□□□□ -1.47
UBR4-215ENST00000492606 ARHGAP39Q9C0H5 1083 aa5.89□□□□□ -1.47
UBR4-215ENST00000492606 RNF208Q9H0X6 261 aa5.89□□□□□ -1.47
UBR4-215ENST00000492606 TMOD3Q9NYL9 352 aa5.89□□□□□ -1.47
UBR4-215ENST00000492606 CABP1Q9NZU7 370 aa5.89□□□□□ -1.47
UBR4-215ENST00000492606 CNOT7Q9UIV1 285 aaKnown RBP5.89□□□□□ -1.47
UBR4-215ENST00000492606 COL3A1P02461 1466 aaPredicted RBP5.89□□□□□ -1.47
UBR4-215ENST00000492606 PLXNA3P51805 1871 aa5.88□□□□□ -1.47
UBR4-215ENST00000492606 ATP9BO43861 1147 aa5.88□□□□□ -1.47
UBR4-215ENST00000492606 CCNYL3P0C7X3 344 aa5.88□□□□□ -1.47
UBR4-215ENST00000492606 SEMA3FQ13275 785 aa5.88□□□□□ -1.47
UBR4-215ENST00000492606 PDXDC2PQ6P474 469 aa5.88□□□□□ -1.47
UBR4-215ENST00000492606 LARGE2Q8N3Y3 721 aa5.88□□□□□ -1.47
UBR4-215ENST00000492606 STAC3Q96MF2 364 aa5.88□□□□□ -1.47
UBR4-215ENST00000492606 MTRQ99707 1265 aa5.88□□□□□ -1.47
UBR4-215ENST00000492606 NUDT12Q9BQG2 462 aa5.88□□□□□ -1.47
UBR4-215ENST00000492606 FAM86C1Q9NVL1 165 aa5.88□□□□□ -1.47
UBR4-215ENST00000492606 CXXC1Q9P0U4 656 aaPredicted RBP5.88□□□□□ -1.47
UBR4-215ENST00000492606 NARFQ9UHQ1 456 aa5.88□□□□□ -1.47
UBR4-215ENST00000492606 ASTN2O75129 1339 aaPredicted RBP5.88□□□□□ -1.47
UBR4-215ENST00000492606 CHD9Q3L8U1 2897 aa5.88□□□□□ -1.47
UBR4-215ENST00000492606 TRIOO75962 3097 aa5.88□□□□□ -1.47
UBR4-215ENST00000492606 KRT38O76015 456 aa5.87□□□□□ -1.47
UBR4-215ENST00000492606 ATG7O95352 703 aa5.87□□□□□ -1.47
UBR4-215ENST00000492606 EIF4G2P78344 907 aaKnown RBP eCLIP5.87□□□□□ -1.47
UBR4-215ENST00000492606 TBC1D10BQ4KMP7 808 aaPredicted RBP5.87□□□□□ -1.47
UBR4-215ENST00000492606 CDCA8Q53HL2 280 aa5.87□□□□□ -1.47
UBR4-215ENST00000492606 NBPF6Q5VWK0 638 aa5.87□□□□□ -1.47
UBR4-215ENST00000492606 IP6K1Q92551 441 aa5.87□□□□□ -1.47
UBR4-215ENST00000492606 KCTD12Q96CX2 325 aaKnown RBP5.87□□□□□ -1.47
UBR4-215ENST00000492606 NBPF4Q96M43 638 aa5.87□□□□□ -1.47
UBR4-215ENST00000492606 UNC93B1Q9H1C4 597 aa5.87□□□□□ -1.47
UBR4-215ENST00000492606 SH2B1Q9NRF2 756 aaPredicted RBP5.87□□□□□ -1.47
UBR4-215ENST00000492606 KIF24Q5T7B8 1368 aa5.87□□□□□ -1.47
UBR4-215ENST00000492606 COL4A6Q14031 1691 aa5.87□□□□□ -1.47
UBR4-215ENST00000492606 TAF1P21675 1872 aa5.87□□□□□ -1.47
UBR4-215ENST00000492606 LRRC37A2A6NM11 1700 aa5.86□□□□□ -1.47
UBR4-215ENST00000492606 ATRNL1Q5VV63 1379 aa5.86□□□□□ -1.47
UBR4-215ENST00000492606 CGNL1Q0VF96 1302 aa5.86□□□□□ -1.47
UBR4-215ENST00000492606 ADH1BP00325 375 aa5.86□□□□□ -1.47
UBR4-215ENST00000492606 FKBP1BP68106 108 aa5.86□□□□□ -1.47
UBR4-215ENST00000492606 PDE3AQ14432 1141 aa5.86□□□□□ -1.47
UBR4-215ENST00000492606 TSGA10IPQ3SY00 556 aa5.86□□□□□ -1.47
UBR4-215ENST00000492606 AKNAD1Q5T1N1 836 aa5.86□□□□□ -1.47
UBR4-215ENST00000492606 SH3BP5LQ7L8J4 393 aa5.86□□□□□ -1.47
UBR4-215ENST00000492606 SH3RF1Q7Z6J0 888 aa5.86□□□□□ -1.47
UBR4-215ENST00000492606 DCPSQ96C86 337 aaKnown RBP5.86□□□□□ -1.47
UBR4-215ENST00000492606 BCL2L13Q9BXK5 485 aa5.86□□□□□ -1.47
UBR4-215ENST00000492606 CEP126Q9P2H0 1117 aa5.86□□□□□ -1.47
UBR4-215ENST00000492606 GPSM3Q9Y4H4 160 aa5.86□□□□□ -1.47
UBR4-215ENST00000492606 SOS1Q07889 1333 aaPredicted RBP5.85□□□□□ -1.47
UBR4-215ENST00000492606 FAM205AQ6ZU69 1335 aa5.85□□□□□ -1.47
UBR4-215ENST00000492606 TATP17735 454 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms