RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 DDX19BQ9UMR2 479 aa18.15■□□□□ 0.5
SS18L1-205ENST00000492466 COG6Q9Y2V7 657 aa18.15■□□□□ 0.5
SS18L1-205ENST00000492466 SLC34A2O95436 690 aa18.14■□□□□ 0.49
SS18L1-205ENST00000492466 MVPQ14764 893 aaKnown RBP18.14■□□□□ 0.49
SS18L1-205ENST00000492466 CHMP4BQ9H444 224 aaKnown RBP18.14■□□□□ 0.49
SS18L1-205ENST00000492466 CEP126Q9P2H0 1117 aa18.14■□□□□ 0.49
SS18L1-205ENST00000492466 FBXO3Q9UK99 471 aa18.14■□□□□ 0.49
SS18L1-205ENST00000492466 CIAO1O76071 339 aa18.13■□□□□ 0.49
SS18L1-205ENST00000492466 IL15P40933 162 aaPredicted RBP18.13■□□□□ 0.49
SS18L1-205ENST00000492466 MTX1Q13505 466 aa18.13■□□□□ 0.49
SS18L1-205ENST00000492466 TRIM17Q9Y577 477 aa18.13■□□□□ 0.49
SS18L1-205ENST00000492466 SNCAIPQ9Y6H5 919 aa18.13■□□□□ 0.49
SS18L1-205ENST00000492466 SPDYE5A6NIY4 337 aa18.12■□□□□ 0.49
SS18L1-205ENST00000492466 ATP2B3Q16720 1220 aa18.12■□□□□ 0.49
SS18L1-205ENST00000492466 OTUD7BQ6GQQ9 843 aa18.12■□□□□ 0.49
SS18L1-205ENST00000492466 WDR66Q8TBY9 1149 aa18.12■□□□□ 0.49
SS18L1-205ENST00000492466 COPRSQ9NQ92 184 aa18.12■□□□□ 0.49
SS18L1-205ENST00000492466 PNMA6EA0A0J9YXQ4 647 aa18.11■□□□□ 0.49
SS18L1-205ENST00000492466 G3BP1Q13283 466 aaKnown RBP eCLIP18.11■□□□□ 0.49
SS18L1-205ENST00000492466 FAM43AQ8N2R8 423 aa18.11■□□□□ 0.49
SS18L1-205ENST00000492466 CD99L2Q8TCZ2 262 aa18.11■□□□□ 0.49
SS18L1-205ENST00000492466 ZKSCAN4Q969J2 545 aaPredicted RBP18.11■□□□□ 0.49
SS18L1-205ENST00000492466 OTUD5Q96G74 571 aa18.11■□□□□ 0.49
SS18L1-205ENST00000492466 DAGLAQ9Y4D2 1042 aa18.11■□□□□ 0.49
SS18L1-205ENST00000492466 MAST3O60307 1309 aa18.11■□□□□ 0.49
SS18L1-205ENST00000492466 RPAP1Q9BWH6 1393 aaPredicted RBP18.1■□□□□ 0.49
SS18L1-205ENST00000492466 CCL15-CCL14A0A0B4J2E2 113 aa18.1■□□□□ 0.49
SS18L1-205ENST00000492466 ZBTB7BO15156 539 aaPredicted RBP18.1■□□□□ 0.49
SS18L1-205ENST00000492466 ZBTB22O15209 634 aa18.1■□□□□ 0.49
SS18L1-205ENST00000492466 PRDX5P30044 214 aa18.1■□□□□ 0.49
SS18L1-205ENST00000492466 GTF2A2P52657 109 aa18.1■□□□□ 0.49
SS18L1-205ENST00000492466 SP3Q02447 781 aa18.1■□□□□ 0.49
SS18L1-205ENST00000492466 DIXDC1Q155Q3 683 aa18.1■□□□□ 0.49
SS18L1-205ENST00000492466 CCL15Q16663 113 aa18.1■□□□□ 0.49
SS18L1-205ENST00000492466 ERO1AQ96HE7 468 aa18.1■□□□□ 0.49
SS18L1-205ENST00000492466 PTPN22Q9Y2R2 807 aa18.1■□□□□ 0.49
SS18L1-205ENST00000492466 CSADQ9Y600 493 aa18.1■□□□□ 0.49
SS18L1-205ENST00000492466 PHKA1P46020 1223 aa18.09■□□□□ 0.49
SS18L1-205ENST00000492466 PDE3AQ14432 1141 aa18.09■□□□□ 0.49
SS18L1-205ENST00000492466 CDC42EP5Q6NZY7 148 aa18.09■□□□□ 0.49
SS18L1-205ENST00000492466 WRNIP1Q96S55 665 aa18.09■□□□□ 0.49
SS18L1-205ENST00000492466 SALL1Q9NSC2 1324 aa18.08■□□□□ 0.49
SS18L1-205ENST00000492466 IRF6O14896 467 aa18.08■□□□□ 0.48
SS18L1-205ENST00000492466 NFIAQ12857 509 aa18.08■□□□□ 0.48
SS18L1-205ENST00000492466 MIGA2Q7L4E1 593 aa18.08■□□□□ 0.48
SS18L1-205ENST00000492466 ERO1BQ86YB8 467 aa18.08■□□□□ 0.48
SS18L1-205ENST00000492466 FAM151AQ8WW52 585 aa18.08■□□□□ 0.48
SS18L1-205ENST00000492466 TMOD2Q9NZR1 351 aa18.08■□□□□ 0.48
SS18L1-205ENST00000492466 AKAP2Q9Y2D5 859 aa18.08■□□□□ 0.48
SS18L1-205ENST00000492466 ADORA1P30542 326 aa18.07■□□□□ 0.48
SS18L1-205ENST00000492466 RRP1P56182 461 aaKnown RBP18.07■□□□□ 0.48
SS18L1-205ENST00000492466 ATP8B2P98198 1209 aa18.07■□□□□ 0.48
SS18L1-205ENST00000492466 TFCP2Q12800 502 aa18.07■□□□□ 0.48
SS18L1-205ENST00000492466 C20orf194Q5TEA3 1177 aa18.07■□□□□ 0.48
SS18L1-205ENST00000492466 EFCC1Q9HA90 598 aa18.07■□□□□ 0.48
SS18L1-205ENST00000492466 GNL3LQ9NVN8 582 aaKnown RBP18.07■□□□□ 0.48
SS18L1-205ENST00000492466 FAM198AQ9UFP1 575 aa18.07■□□□□ 0.48
SS18L1-205ENST00000492466 ZNF112Q9UJU3 913 aa18.07■□□□□ 0.48
SS18L1-205ENST00000492466 KIAA0100Q14667 2235 aaKnown RBP18.06■□□□□ 0.48
SS18L1-205ENST00000492466 POTEFA5A3E0 1075 aa18.06■□□□□ 0.48
SS18L1-205ENST00000492466 HMMRO75330 724 aa18.06■□□□□ 0.48
SS18L1-205ENST00000492466 SURF6O75683 361 aaKnown RBP18.06■□□□□ 0.48
SS18L1-205ENST00000492466 INPP5BP32019 993 aa18.06■□□□□ 0.48
SS18L1-205ENST00000492466 TAF1CQ15572 869 aaPredicted RBP18.06■□□□□ 0.48
SS18L1-205ENST00000492466 GORABQ5T7V8 394 aa18.06■□□□□ 0.48
SS18L1-205ENST00000492466 CEP85Q6P2H3 762 aa18.06■□□□□ 0.48
SS18L1-205ENST00000492466 ZFPM1Q8IX07 1006 aa18.06■□□□□ 0.48
SS18L1-205ENST00000492466 ARMC5Q96C12 935 aa18.06■□□□□ 0.48
SS18L1-205ENST00000492466 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.06■□□□□ 0.48
SS18L1-205ENST00000492466 BTBD19C9JJ37 291 aa18.05■□□□□ 0.48
SS18L1-205ENST00000492466 SEMA3EO15041 775 aa18.05■□□□□ 0.48
SS18L1-205ENST00000492466 LDHBP07195 334 aaKnown RBP18.05■□□□□ 0.48
SS18L1-205ENST00000492466 TIMM10P62072 90 aa18.05■□□□□ 0.48
SS18L1-205ENST00000492466 TCP10Q12799 353 aa18.05■□□□□ 0.48
SS18L1-205ENST00000492466 PPIL2Q13356 520 aa18.05■□□□□ 0.48
SS18L1-205ENST00000492466 CCDC102BQ68D86 513 aa18.05■□□□□ 0.48
SS18L1-205ENST00000492466 HOOK2Q96ED9 719 aa18.05■□□□□ 0.48
SS18L1-205ENST00000492466 NEUROD6Q96NK8 337 aa18.05■□□□□ 0.48
SS18L1-205ENST00000492466 ZNF341Q9BYN7 854 aa18.05■□□□□ 0.48
SS18L1-205ENST00000492466 ZFYVE28Q9HCC9 887 aa18.05■□□□□ 0.48
SS18L1-205ENST00000492466 DENND2AQ9ULE3 1009 aa18.05■□□□□ 0.48
SS18L1-205ENST00000492466 CETPP11597 493 aa18.04■□□□□ 0.48
SS18L1-205ENST00000492466 POLA2Q14181 598 aa18.04■□□□□ 0.48
SS18L1-205ENST00000492466 PRPF38BQ5VTL8 546 aaKnown RBP18.04■□□□□ 0.48
SS18L1-205ENST00000492466 DCAF15Q66K64 600 aa18.04■□□□□ 0.48
SS18L1-205ENST00000492466 SSH3Q8TE77 659 aa18.04■□□□□ 0.48
SS18L1-205ENST00000492466 ZCCHC17Q9NP64 241 aaKnown RBP18.04■□□□□ 0.48
SS18L1-205ENST00000492466 USP40Q9NVE5 1235 aa18.04■□□□□ 0.48
SS18L1-205ENST00000492466 ATRNL1Q5VV63 1379 aa18.04■□□□□ 0.48
SS18L1-205ENST00000492466 GAKO14976 1311 aa18.03■□□□□ 0.48
SS18L1-205ENST00000492466 A0A1B0GUL7 405 aa18.03■□□□□ 0.48
SS18L1-205ENST00000492466 TLR2O60603 784 aa18.03■□□□□ 0.48
SS18L1-205ENST00000492466 PPATQ06203 517 aa18.03■□□□□ 0.48
SS18L1-205ENST00000492466 SNAPC2Q13487 334 aa18.03■□□□□ 0.48
SS18L1-205ENST00000492466 MOGSQ13724 837 aa18.03■□□□□ 0.48
SS18L1-205ENST00000492466 RASGRF1Q13972 1273 aa18.03■□□□□ 0.48
SS18L1-205ENST00000492466 BCL11AQ9H165 835 aa18.02■□□□□ 0.48
SS18L1-205ENST00000492466 KCNH4Q9UQ05 1017 aa18.02■□□□□ 0.48
SS18L1-205ENST00000492466 RFX7Q2KHR2 1363 aa18.02■□□□□ 0.47
SS18L1-205ENST00000492466 RBBP6Q7Z6E9 1792 aaKnown RBP18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms