RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 SLC39A14Q15043 492 aa11.87□□□□□ -0.51
SREBF2-208ENST00000491541 HSP90AB2PQ58FF8 381 aa11.87□□□□□ -0.51
SREBF2-208ENST00000491541 CEP57L1Q8IYX8 460 aa11.87□□□□□ -0.51
SREBF2-208ENST00000491541 MRPS27Q92552 414 aaKnown RBP11.87□□□□□ -0.51
SREBF2-208ENST00000491541 SMARCE1Q969G3 411 aa11.87□□□□□ -0.51
SREBF2-208ENST00000491541 ERCC5P28715 1186 aaPredicted RBP11.87□□□□□ -0.51
SREBF2-208ENST00000491541 HDGFP51858 240 aaKnown RBP11.87□□□□□ -0.51
SREBF2-208ENST00000491541 MB21D2Q8IYB1 491 aaPredicted RBP11.87□□□□□ -0.51
SREBF2-208ENST00000491541 BICD2Q8TD16 824 aa11.87□□□□□ -0.51
SREBF2-208ENST00000491541 JAKMIP1Q96N16 626 aaKnown RBP11.87□□□□□ -0.51
SREBF2-208ENST00000491541 RASSF4Q9H2L5 321 aa11.87□□□□□ -0.51
SREBF2-208ENST00000491541 NT5C2P49902 561 aa11.87□□□□□ -0.51
SREBF2-208ENST00000491541 TEX35Q5T0J7 233 aa11.87□□□□□ -0.51
SREBF2-208ENST00000491541 DHX32Q7L7V1 743 aaKnown RBP11.87□□□□□ -0.51
SREBF2-208ENST00000491541 CD302Q8IX05 232 aa11.87□□□□□ -0.51
SREBF2-208ENST00000491541 CNPY4Q8N129 248 aa11.87□□□□□ -0.51
SREBF2-208ENST00000491541 MED15Q96RN5 788 aa11.87□□□□□ -0.51
SREBF2-208ENST00000491541 PCDHA7Q9UN72 937 aa11.87□□□□□ -0.51
SREBF2-208ENST00000491541 BECN2A8MW95 431 aa11.86□□□□□ -0.51
SREBF2-208ENST00000491541 CBFA2T2O43439 604 aa11.86□□□□□ -0.51
SREBF2-208ENST00000491541 CUTAO60888 179 aa11.86□□□□□ -0.51
SREBF2-208ENST00000491541 SLIT2O94813 1529 aa11.86□□□□□ -0.51
SREBF2-208ENST00000491541 LTBP1Q14766 1721 aa11.86□□□□□ -0.51
SREBF2-208ENST00000491541 MROH7-TTC4A0A0A0MT08 1334 aa11.86□□□□□ -0.51
SREBF2-208ENST00000491541 H3BQF6 201 aa11.86□□□□□ -0.51
SREBF2-208ENST00000491541 ZKSCAN1P17029 563 aaPredicted RBP11.86□□□□□ -0.51
SREBF2-208ENST00000491541 APOBRQ0VD83 1088 aa11.86□□□□□ -0.51
SREBF2-208ENST00000491541 ALX1Q15699 326 aa11.86□□□□□ -0.51
SREBF2-208ENST00000491541 EAF2Q96CJ1 260 aaPredicted RBP11.86□□□□□ -0.51
SREBF2-208ENST00000491541 GPATCH3Q96I76 525 aa11.86□□□□□ -0.51
SREBF2-208ENST00000491541 STK31Q9BXU1 1019 aa11.86□□□□□ -0.51
SREBF2-208ENST00000491541 MYO1CO00159 1063 aa11.86□□□□□ -0.51
SREBF2-208ENST00000491541 FNTAP49354 379 aa11.86□□□□□ -0.51
SREBF2-208ENST00000491541 OS9Q13438 667 aaPredicted RBP11.86□□□□□ -0.51
SREBF2-208ENST00000491541 PAPD7Q5XG87 772 aaKnown RBP11.86□□□□□ -0.51
SREBF2-208ENST00000491541 SRGAP1Q7Z6B7 1085 aa11.86□□□□□ -0.51
SREBF2-208ENST00000491541 PSMD14O00487 310 aa11.85□□□□□ -0.51
SREBF2-208ENST00000491541 TRDNQ13061 729 aa11.85□□□□□ -0.51
SREBF2-208ENST00000491541 MKRN4PQ13434 485 aaPredicted RBP11.85□□□□□ -0.51
SREBF2-208ENST00000491541 WLSQ5T9L3 541 aa11.85□□□□□ -0.51
SREBF2-208ENST00000491541 ICE2Q659A1 982 aa11.85□□□□□ -0.51
SREBF2-208ENST00000491541 NEUROD6Q96NK8 337 aa11.85□□□□□ -0.51
SREBF2-208ENST00000491541 TAF6LQ9Y6J9 622 aa11.85□□□□□ -0.51
SREBF2-208ENST00000491541 ZSCAN12O43309 604 aa11.85□□□□□ -0.51
SREBF2-208ENST00000491541 CYP21A2P08686 494 aa11.85□□□□□ -0.51
SREBF2-208ENST00000491541 NBPF6Q5VWK0 638 aa11.85□□□□□ -0.51
SREBF2-208ENST00000491541 BLOC1S2Q6QNY1 142 aa11.85□□□□□ -0.51
SREBF2-208ENST00000491541 HOMER1Q86YM7 354 aa11.85□□□□□ -0.51
SREBF2-208ENST00000491541 MREGQ8N565 214 aa11.85□□□□□ -0.51
SREBF2-208ENST00000491541 CFAP61Q8NHU2 1237 aa11.85□□□□□ -0.51
SREBF2-208ENST00000491541 RPGRIP1Q96KN7 1286 aa11.85□□□□□ -0.51
SREBF2-208ENST00000491541 NBPF4Q96M43 638 aa11.85□□□□□ -0.51
SREBF2-208ENST00000491541 ARGLU1Q9NWB6 273 aaPredicted RBP11.85□□□□□ -0.51
SREBF2-208ENST00000491541 DBF4Q9UBU7 674 aaPredicted RBP11.85□□□□□ -0.51
SREBF2-208ENST00000491541 ZNF536O15090 1300 aa11.85□□□□□ -0.51
SREBF2-208ENST00000491541 F6X3S4 739 aa11.85□□□□□ -0.51
SREBF2-208ENST00000491541 RRS1Q15050 365 aaKnown RBP11.85□□□□□ -0.51
SREBF2-208ENST00000491541 C11orf91Q3C1V1 193 aa11.85□□□□□ -0.51
SREBF2-208ENST00000491541 NRAPQ86VF7 1730 aa11.85□□□□□ -0.51
SREBF2-208ENST00000491541 SGMS1Q86VZ5 419 aa11.85□□□□□ -0.51
SREBF2-208ENST00000491541 EFCAB13Q8IY85 973 aa11.85□□□□□ -0.51
SREBF2-208ENST00000491541 SYTL4Q96C24 671 aaPredicted RBP11.85□□□□□ -0.51
SREBF2-208ENST00000491541 LOXHD1Q8IVV2 1947 aa11.85□□□□□ -0.51
SREBF2-208ENST00000491541 ATP2B1P20020 1258 aa11.84□□□□□ -0.51
SREBF2-208ENST00000491541 NNTQ13423 1086 aa11.84□□□□□ -0.51
SREBF2-208ENST00000491541 GNL2Q13823 731 aaKnown RBP11.84□□□□□ -0.51
SREBF2-208ENST00000491541 WHAMMP3Q1A5X7 153 aa11.84□□□□□ -0.51
SREBF2-208ENST00000491541 CEP120Q8N960 986 aa11.84□□□□□ -0.51
SREBF2-208ENST00000491541 GRIN2DO15399 1336 aa11.84□□□□□ -0.51
SREBF2-208ENST00000491541 SYF2O95926 243 aaKnown RBP11.84□□□□□ -0.51
SREBF2-208ENST00000491541 BMP6P22004 513 aa11.84□□□□□ -0.51
SREBF2-208ENST00000491541 PDIA3P30101 505 aaKnown RBP11.84□□□□□ -0.51
SREBF2-208ENST00000491541 CUL4BQ13620 913 aa11.84□□□□□ -0.51
SREBF2-208ENST00000491541 ZRSR1Q15695 479 aaKnown RBP11.84□□□□□ -0.51
SREBF2-208ENST00000491541 ZNF589Q86UQ0 364 aaPredicted RBP11.84□□□□□ -0.51
SREBF2-208ENST00000491541 OSCARQ8IYS5 282 aa11.84□□□□□ -0.51
SREBF2-208ENST00000491541 ADAM21Q9UKJ8 722 aa11.84□□□□□ -0.51
SREBF2-208ENST00000491541 KIF1CO43896 1103 aaKnown RBP11.84□□□□□ -0.51
SREBF2-208ENST00000491541 AMOTQ4VCS5 1084 aa11.84□□□□□ -0.51
SREBF2-208ENST00000491541 SPATS2Q86XZ4 545 aaKnown RBP11.84□□□□□ -0.51
SREBF2-208ENST00000491541 USP28Q96RU2 1077 aa11.84□□□□□ -0.51
SREBF2-208ENST00000491541 NCAPGQ9BPX3 1015 aa11.84□□□□□ -0.51
SREBF2-208ENST00000491541 XPO4Q9C0E2 1151 aaKnown RBP11.84□□□□□ -0.51
SREBF2-208ENST00000491541 ARFGEF1Q9Y6D6 1849 aa11.84□□□□□ -0.51
SREBF2-208ENST00000491541 IGKV5-2P06315 115 aa11.83□□□□□ -0.51
SREBF2-208ENST00000491541 NTRK3Q16288 839 aa11.83□□□□□ -0.51
SREBF2-208ENST00000491541 MEA1Q16626 185 aa11.83□□□□□ -0.51
SREBF2-208ENST00000491541 ERCC6LQ2NKX8 1250 aa11.83□□□□□ -0.51
SREBF2-208ENST00000491541 NEK1Q96PY6 1258 aa11.83□□□□□ -0.51
SREBF2-208ENST00000491541 FSBPO95073 299 aa11.83□□□□□ -0.52
SREBF2-208ENST00000491541 HNRNPH3P31942 346 aaKnown RBP11.83□□□□□ -0.52
SREBF2-208ENST00000491541 ARHGAP25P42331 645 aa11.83□□□□□ -0.52
SREBF2-208ENST00000491541 KBTBD3Q8NAB2 608 aa11.83□□□□□ -0.52
SREBF2-208ENST00000491541 PRPF38AQ8NAV1 312 aaKnown RBP11.83□□□□□ -0.52
SREBF2-208ENST00000491541 NGDNQ8NEJ9 315 aaKnown RBP11.83□□□□□ -0.52
SREBF2-208ENST00000491541 BRF1Q92994 677 aa11.83□□□□□ -0.52
SREBF2-208ENST00000491541 DDX21Q9NR30 783 aaKnown RBP eCLIP11.83□□□□□ -0.52
SREBF2-208ENST00000491541 PPP2R2CQ9Y2T4 447 aa11.83□□□□□ -0.52
SREBF2-208ENST00000491541 SCN4AP35499 1836 aa11.83□□□□□ -0.52
SREBF2-208ENST00000491541 SMC1AQ14683 1233 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms