RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 MEGF11A6BM72 1044 aa8.07□□□□□ -1.12
HMGB1P38-201ENST00000490557 BMP6P22004 513 aa8.07□□□□□ -1.12
HMGB1P38-201ENST00000490557 NOS3P29474 1203 aa8.07□□□□□ -1.12
HMGB1P38-201ENST00000490557 GBP2P32456 591 aaPredicted RBP8.07□□□□□ -1.12
HMGB1P38-201ENST00000490557 GSK3AP49840 483 aa8.07□□□□□ -1.12
HMGB1P38-201ENST00000490557 RPS26P62854 115 aaKnown RBP8.07□□□□□ -1.12
HMGB1P38-201ENST00000490557 PLA2G4EQ3MJ16 856 aa8.07□□□□□ -1.12
HMGB1P38-201ENST00000490557 AKAP4Q5JQC9 854 aa8.07□□□□□ -1.12
HMGB1P38-201ENST00000490557 STK35Q8TDR2 534 aa8.07□□□□□ -1.12
HMGB1P38-201ENST00000490557 CCDC86Q9H6F5 360 aaKnown RBP8.07□□□□□ -1.12
HMGB1P38-201ENST00000490557 KRT82Q9NSB4 513 aa8.07□□□□□ -1.12
HMGB1P38-201ENST00000490557 F6X3S4 739 aa8.06□□□□□ -1.12
HMGB1P38-201ENST00000490557 GAS2O43903 313 aaKnown RBP8.06□□□□□ -1.12
HMGB1P38-201ENST00000490557 DLGAP3O95886 979 aa8.06□□□□□ -1.12
HMGB1P38-201ENST00000490557 CTSBP07858 339 aa8.06□□□□□ -1.12
HMGB1P38-201ENST00000490557 LIG1P18858 919 aa8.06□□□□□ -1.12
HMGB1P38-201ENST00000490557 PDZD3Q86UT5 571 aa8.06□□□□□ -1.12
HMGB1P38-201ENST00000490557 GRIN3AQ8TCU5 1115 aa8.06□□□□□ -1.12
HMGB1P38-201ENST00000490557 TMPRSS13Q9BYE2 586 aa8.06□□□□□ -1.12
HMGB1P38-201ENST00000490557 MIR1-1HGQ9H1L0 117 aa8.06□□□□□ -1.12
HMGB1P38-201ENST00000490557 AP4E1Q9UPM8 1137 aa8.06□□□□□ -1.12
HMGB1P38-201ENST00000490557 AOC2O75106 756 aa8.05□□□□□ -1.12
HMGB1P38-201ENST00000490557 TRIM37O94972 964 aa8.05□□□□□ -1.12
HMGB1P38-201ENST00000490557 SCARA3Q6AZY7 606 aa8.05□□□□□ -1.12
HMGB1P38-201ENST00000490557 AGMOQ6ZNB7 445 aa8.05□□□□□ -1.12
HMGB1P38-201ENST00000490557 SMG8Q8ND04 991 aaKnown RBP8.05□□□□□ -1.12
HMGB1P38-201ENST00000490557 RSRP1Q9BUV0 290 aa8.05□□□□□ -1.12
HMGB1P38-201ENST00000490557 MINDY4BA8MYZ0 360 aa8.04□□□□□ -1.12
HMGB1P38-201ENST00000490557 FANCCQ00597 558 aa8.04□□□□□ -1.12
HMGB1P38-201ENST00000490557 ZNF252P-AS1Q0IIN9 211 aa8.04□□□□□ -1.12
HMGB1P38-201ENST00000490557 GPBAR1Q8TDU6 330 aa8.04□□□□□ -1.12
HMGB1P38-201ENST00000490557 TMEM74Q96NL1 305 aa8.04□□□□□ -1.12
HMGB1P38-201ENST00000490557 SUGCTQ9HAC7 445 aa8.04□□□□□ -1.12
HMGB1P38-201ENST00000490557 PICK1Q9NRD5 415 aa8.04□□□□□ -1.12
HMGB1P38-201ENST00000490557 KBTBD4Q9NVX7 518 aa8.04□□□□□ -1.12
HMGB1P38-201ENST00000490557 PCDHA4Q9UN74 947 aa8.04□□□□□ -1.12
HMGB1P38-201ENST00000490557 TLR6Q9Y2C9 796 aa8.04□□□□□ -1.12
HMGB1P38-201ENST00000490557 USP11P51784 963 aa8.03□□□□□ -1.12
HMGB1P38-201ENST00000490557 SNAP47Q5SQN1 464 aa8.03□□□□□ -1.12
HMGB1P38-201ENST00000490557 RASIP1Q5U651 963 aa8.03□□□□□ -1.12
HMGB1P38-201ENST00000490557 GPAT2Q6NUI2 795 aa8.03□□□□□ -1.12
HMGB1P38-201ENST00000490557 DYMQ7RTS9 669 aa8.03□□□□□ -1.12
HMGB1P38-201ENST00000490557 ERMP1Q7Z2K6 904 aa8.03□□□□□ -1.12
HMGB1P38-201ENST00000490557 UTP4Q969X6 686 aaKnown RBP8.03□□□□□ -1.12
HMGB1P38-201ENST00000490557 WDR18Q9BV38 432 aa8.03□□□□□ -1.12
HMGB1P38-201ENST00000490557 MSTNO14793 375 aa8.02□□□□□ -1.13
HMGB1P38-201ENST00000490557 ZNF862O60290 1169 aa8.02□□□□□ -1.13
HMGB1P38-201ENST00000490557 ADH5P11766 374 aa8.02□□□□□ -1.13
HMGB1P38-201ENST00000490557 DRD2P14416 443 aa8.02□□□□□ -1.13
HMGB1P38-201ENST00000490557 ID3Q02535 119 aa8.02□□□□□ -1.13
HMGB1P38-201ENST00000490557 SOX4Q06945 474 aaPredicted RBP8.02□□□□□ -1.13
HMGB1P38-201ENST00000490557 SEPT6Q14141 434 aa8.02□□□□□ -1.13
HMGB1P38-201ENST00000490557 KIF4BQ2VIQ3 1234 aa8.02□□□□□ -1.13
HMGB1P38-201ENST00000490557 UVSSAQ2YD98 709 aa8.02□□□□□ -1.13
HMGB1P38-201ENST00000490557 LDLRAD1Q5T700 205 aa8.02□□□□□ -1.13
HMGB1P38-201ENST00000490557 USP48Q86UV5 1035 aa8.02□□□□□ -1.13
HMGB1P38-201ENST00000490557 PHC3Q8NDX5 983 aa8.02□□□□□ -1.13
HMGB1P38-201ENST00000490557 JARID2Q92833 1246 aaPredicted RBP8.02□□□□□ -1.13
HMGB1P38-201ENST00000490557 TP53INP1Q96A56 240 aa8.02□□□□□ -1.13
HMGB1P38-201ENST00000490557 ELMO3Q96BJ8 720 aa8.02□□□□□ -1.13
HMGB1P38-201ENST00000490557 WDR89Q96FK6 387 aaPredicted RBP8.02□□□□□ -1.13
HMGB1P38-201ENST00000490557 COPRSQ9NQ92 184 aa8.02□□□□□ -1.13
HMGB1P38-201ENST00000490557 PCDHB5Q9Y5E4 795 aa8.02□□□□□ -1.13
HMGB1P38-201ENST00000490557 BPNT1O95861 308 aa8.01□□□□□ -1.13
HMGB1P38-201ENST00000490557 TCF3P15923 654 aa8.01□□□□□ -1.13
HMGB1P38-201ENST00000490557 TFE3P19532 575 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P38-201ENST00000490557 CAMK2GQ13555 558 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P38-201ENST00000490557 MPRIPQ6WCQ1 1025 aa8.01□□□□□ -1.13
HMGB1P38-201ENST00000490557 Q6ZS46 218 aa8.01□□□□□ -1.13
HMGB1P38-201ENST00000490557 NPM2Q86SE8 214 aaKnown RBP8.01□□□□□ -1.13
HMGB1P38-201ENST00000490557 MEGF10Q96KG7 1140 aa8.01□□□□□ -1.13
HMGB1P38-201ENST00000490557 YIPF2Q9BWQ6 316 aa8.01□□□□□ -1.13
HMGB1P38-201ENST00000490557 PIDD1Q9HB75 910 aa8.01□□□□□ -1.13
HMGB1P38-201ENST00000490557 PF4P02776 101 aa8□□□□□ -1.13
HMGB1P38-201ENST00000490557 RXRBP28702 533 aa8□□□□□ -1.13
HMGB1P38-201ENST00000490557 PREPP48147 710 aa8□□□□□ -1.13
HMGB1P38-201ENST00000490557 LMNB2Q03252 620 aa8□□□□□ -1.13
HMGB1P38-201ENST00000490557 FAM160A1Q05DH4 1040 aa8□□□□□ -1.13
HMGB1P38-201ENST00000490557 C9orf131Q5VYM1 1079 aa8□□□□□ -1.13
HMGB1P38-201ENST00000490557 HDXQ7Z353 690 aa8□□□□□ -1.13
HMGB1P38-201ENST00000490557 TRIM42Q8IWZ5 723 aa8□□□□□ -1.13
HMGB1P38-201ENST00000490557 DZIP1LQ8IYY4 767 aaKnown RBP8□□□□□ -1.13
HMGB1P38-201ENST00000490557 UBL7Q96S82 380 aaPredicted RBP8□□□□□ -1.13
HMGB1P38-201ENST00000490557 ATXN3LQ9H3M9 355 aa8□□□□□ -1.13
HMGB1P38-201ENST00000490557 SYNGAP1Q96PV0 1343 aa8□□□□□ -1.13
HMGB1P38-201ENST00000490557 DHX15O43143 795 aaKnown RBP7.99□□□□□ -1.13
HMGB1P38-201ENST00000490557 TIAF1O95411 115 aa7.99□□□□□ -1.13
HMGB1P38-201ENST00000490557 IGHA1P01876 353 aa7.99□□□□□ -1.13
HMGB1P38-201ENST00000490557 EIF4A3P38919 411 aaKnown RBP7.99□□□□□ -1.13
HMGB1P38-201ENST00000490557 ASPAP45381 313 aa7.99□□□□□ -1.13
HMGB1P38-201ENST00000490557 HDLBPQ00341 1268 aaKnown RBP7.99□□□□□ -1.13
HMGB1P38-201ENST00000490557 NT5DC4Q86YG4 428 aa7.99□□□□□ -1.13
HMGB1P38-201ENST00000490557 GOLM1Q8NBJ4 401 aa7.99□□□□□ -1.13
HMGB1P38-201ENST00000490557 FAM46AQ96IP4 442 aaKnown RBP7.99□□□□□ -1.13
HMGB1P38-201ENST00000490557 KCNF1Q9H3M0 494 aa7.99□□□□□ -1.13
HMGB1P38-201ENST00000490557 DCDC2CA8MYV0 355 aa7.98□□□□□ -1.13
HMGB1P38-201ENST00000490557 RAB6AP20340 208 aa7.98□□□□□ -1.13
HMGB1P38-201ENST00000490557 ZNF394Q53GI3 561 aa7.98□□□□□ -1.13
HMGB1P38-201ENST00000490557 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P38-201ENST00000490557 CCDC84Q86UT8 332 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms