RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 JMYQ8N9B5 988 aa15.08■□□□□ 0
HDAC1-210ENST00000490081 KLRG1Q96E93 195 aa15.08■□□□□ 0
HDAC1-210ENST00000490081 PRMT6Q96LA8 375 aaPredicted RBP15.08■□□□□ 0
HDAC1-210ENST00000490081 PITPNM2Q9BZ72 1349 aa15.08■□□□□ 0
HDAC1-210ENST00000490081 SHTN1A0MZ66 631 aa15.07■□□□□ 0
HDAC1-210ENST00000490081 TRIM6-TRIM34B2RNG4 842 aa15.07■□□□□ 0
HDAC1-210ENST00000490081 BAG3O95817 575 aa15.07■□□□□ 0
HDAC1-210ENST00000490081 CYP7A1P22680 504 aa15.07■□□□□ 0
HDAC1-210ENST00000490081 HIRAP54198 1017 aaPredicted RBP15.07■□□□□ 0
HDAC1-210ENST00000490081 DIXDC1Q155Q3 683 aa15.07■□□□□ 0
HDAC1-210ENST00000490081 SAMD7Q7Z3H4 446 aa15.07■□□□□ 0
HDAC1-210ENST00000490081 FSD1Q9BTV5 496 aa15.07■□□□□ 0
HDAC1-210ENST00000490081 MYO1BO43795 1136 aa15.06■□□□□ 0
HDAC1-210ENST00000490081 EGFRP00533 1210 aa15.06■□□□□ 0
HDAC1-210ENST00000490081 ZMYM1Q5SVZ6 1142 aa15.06■□□□□ 0
HDAC1-210ENST00000490081 APPBP2Q92624 585 aa15.06■□□□□ 0
HDAC1-210ENST00000490081 ZNF532Q9HCE3 1301 aa15.06■□□□□ 0
HDAC1-210ENST00000490081 POLR2AP24928 1970 aaKnown RBP15.05■□□□□ 0
HDAC1-210ENST00000490081 RGS3P49796 1198 aa15.05■□□□□ -0
HDAC1-210ENST00000490081 RBM5P52756 815 aaKnown RBP eCLIP15.05■□□□□ -0
HDAC1-210ENST00000490081 RHBDL3P58872 404 aa15.05■□□□□ -0
HDAC1-210ENST00000490081 NBPF9Q3BBW0 867 aa15.05■□□□□ -0
HDAC1-210ENST00000490081 SPDYE2Q495Y8 402 aa15.05■□□□□ -0
HDAC1-210ENST00000490081 TBC1D10BQ4KMP7 808 aaPredicted RBP15.05■□□□□ -0
HDAC1-210ENST00000490081 ADGRA1Q86SQ6 560 aa15.05■□□□□ -0
HDAC1-210ENST00000490081 LDHDQ86WU2 507 aa15.05■□□□□ -0
HDAC1-210ENST00000490081 TRPM4Q8TD43 1214 aa15.05■□□□□ -0
HDAC1-210ENST00000490081 RILPL2Q969X0 211 aa15.05■□□□□ -0
HDAC1-210ENST00000490081 RIOK1Q9BRS2 568 aaKnown RBP15.05■□□□□ -0
HDAC1-210ENST00000490081 IDI2Q9BXS1 227 aa15.05■□□□□ -0
HDAC1-210ENST00000490081 HELLSQ9NRZ9 838 aa15.05■□□□□ -0
HDAC1-210ENST00000490081 POTEIP0CG38 1075 aa15.04■□□□□ -0
HDAC1-210ENST00000490081 POTEJP0CG39 1038 aa15.04■□□□□ -0
HDAC1-210ENST00000490081 CDC42EP5Q6NZY7 148 aa15.04■□□□□ -0
HDAC1-210ENST00000490081 NOL10Q9BSC4 688 aaKnown RBP15.04■□□□□ -0
HDAC1-210ENST00000490081 FOCADQ5VW36 1801 aa15.03■□□□□ -0
HDAC1-210ENST00000490081 RPAP1Q9BWH6 1393 aaPredicted RBP15.03■□□□□ -0
HDAC1-210ENST00000490081 BTDP43251 543 aa15.03■□□□□ -0
HDAC1-210ENST00000490081 RBM26Q5T8P6 1007 aaKnown RBP15.03■□□□□ -0
HDAC1-210ENST00000490081 FAM83AQ86UY5 434 aa15.03■□□□□ -0
HDAC1-210ENST00000490081 SKAP1Q86WV1 359 aa15.03■□□□□ -0
HDAC1-210ENST00000490081 OSBP2Q969R2 916 aa15.03■□□□□ -0
HDAC1-210ENST00000490081 TDRD3Q9H7E2 651 aaKnown RBP15.03■□□□□ -0
HDAC1-210ENST00000490081 USP40Q9NVE5 1235 aa15.03■□□□□ -0
HDAC1-210ENST00000490081 ZNF70Q9UC06 446 aaPredicted RBP15.03■□□□□ -0
HDAC1-210ENST00000490081 CDK5RAP2Q96SN8 1893 aa15.03■□□□□ -0
HDAC1-210ENST00000490081 MAGEB6P1A0A0J9YX57 407 aa15.02■□□□□ -0
HDAC1-210ENST00000490081 ENTPD3O75355 529 aa15.02■□□□□ -0
HDAC1-210ENST00000490081 GNAT2P19087 354 aa15.02■□□□□ -0
HDAC1-210ENST00000490081 CHMLP26374 656 aa15.02■□□□□ -0
HDAC1-210ENST00000490081 TNFAIP1Q13829 316 aa15.02■□□□□ -0
HDAC1-210ENST00000490081 MCMDC2Q4G0Z9 681 aa15.02■□□□□ -0
HDAC1-210ENST00000490081 GIMAP6Q6P9H5 292 aa15.02■□□□□ -0
HDAC1-210ENST00000490081 APOBEC3FQ8IUX4 373 aaKnown RBP15.02■□□□□ -0
HDAC1-210ENST00000490081 PUS7LQ9H0K6 701 aaKnown RBP15.02■□□□□ -0
HDAC1-210ENST00000490081 PCDHAC2Q9Y5I4 1007 aa15.02■□□□□ -0
HDAC1-210ENST00000490081 PPP2R3BQ9Y5P8 575 aa15.02■□□□□ -0
HDAC1-210ENST00000490081 WDHD1O75717 1129 aaPredicted RBP15.01□□□□□ -0.01
HDAC1-210ENST00000490081 MFAP1P55081 439 aaKnown RBP15.01□□□□□ -0.01
HDAC1-210ENST00000490081 CHADLQ6NUI6 762 aa15.01□□□□□ -0.01
HDAC1-210ENST00000490081 RUFY2Q8WXA3 655 aa15.01□□□□□ -0.01
HDAC1-210ENST00000490081 DCPSQ96C86 337 aaKnown RBP15.01□□□□□ -0.01
HDAC1-210ENST00000490081 STRBPQ96SI9 672 aaKnown RBP15.01□□□□□ -0.01
HDAC1-210ENST00000490081 AATFQ9NY61 560 aaKnown RBP eCLIP15.01□□□□□ -0.01
HDAC1-210ENST00000490081 TMOD2Q9NZR1 351 aa15.01□□□□□ -0.01
HDAC1-210ENST00000490081 MKRN1Q9UHC7 482 aaKnown RBP15.01□□□□□ -0.01
HDAC1-210ENST00000490081 TAOK2Q9UL54 1235 aa15.01□□□□□ -0.01
HDAC1-210ENST00000490081 COL2A1P02458 1487 aaPredicted RBP15.01□□□□□ -0.01
HDAC1-210ENST00000490081 RAD50Q92878 1312 aa15□□□□□ -0.01
HDAC1-210ENST00000490081 TNNI2P48788 182 aa15□□□□□ -0.01
HDAC1-210ENST00000490081 ANGEL2Q5VTE6 544 aaKnown RBP15□□□□□ -0.01
HDAC1-210ENST00000490081 CDC37L1Q7L3B6 337 aa15□□□□□ -0.01
HDAC1-210ENST00000490081 FAM151AQ8WW52 585 aa15□□□□□ -0.01
HDAC1-210ENST00000490081 AIDAQ96BJ3 306 aa15□□□□□ -0.01
HDAC1-210ENST00000490081 CRNKL1Q9BZJ0 848 aaKnown RBP15□□□□□ -0.01
HDAC1-210ENST00000490081 DIAPH3Q9NSV4 1193 aa15□□□□□ -0.01
HDAC1-210ENST00000490081 ATP8A2Q9NTI2 1148 aa15□□□□□ -0.01
HDAC1-210ENST00000490081 CHGBP05060 677 aa14.99□□□□□ -0.01
HDAC1-210ENST00000490081 NMIQ13287 307 aaPredicted RBP14.99□□□□□ -0.01
HDAC1-210ENST00000490081 EAPPQ56P03 285 aaPredicted RBP14.99□□□□□ -0.01
HDAC1-210ENST00000490081 SH3RF3Q8TEJ3 882 aaPredicted RBP14.99□□□□□ -0.01
HDAC1-210ENST00000490081 GGA3Q9NZ52 723 aa14.99□□□□□ -0.01
HDAC1-210ENST00000490081 ATRNL1Q5VV63 1379 aa14.98□□□□□ -0.01
HDAC1-210ENST00000490081 A0A0D9SFI3 127 aa14.98□□□□□ -0.01
HDAC1-210ENST00000490081 PATL2C9JE40 543 aaKnown RBP14.98□□□□□ -0.01
HDAC1-210ENST00000490081 GPAA1O43292 621 aa14.98□□□□□ -0.01
HDAC1-210ENST00000490081 CDC45O75419 566 aa14.98□□□□□ -0.01
HDAC1-210ENST00000490081 MBD4O95243 580 aa14.98□□□□□ -0.01
HDAC1-210ENST00000490081 DYNLL1P63167 89 aaKnown RBP14.98□□□□□ -0.01
HDAC1-210ENST00000490081 ALX1Q15699 326 aa14.98□□□□□ -0.01
HDAC1-210ENST00000490081 SLFNL1Q499Z3 407 aa14.98□□□□□ -0.01
HDAC1-210ENST00000490081 SULF1Q8IWU6 871 aa14.98□□□□□ -0.01
HDAC1-210ENST00000490081 TEX11Q8IYF3 940 aa14.98□□□□□ -0.01
HDAC1-210ENST00000490081 LCORLQ8N3X6 602 aa14.98□□□□□ -0.01
HDAC1-210ENST00000490081 MIGA1Q8NAN2 632 aa14.98□□□□□ -0.01
HDAC1-210ENST00000490081 FAM227BQ96M60 508 aa14.98□□□□□ -0.01
HDAC1-210ENST00000490081 DEFB129Q9H1M3 183 aa14.98□□□□□ -0.01
HDAC1-210ENST00000490081 DHX36Q9H2U1 1008 aaKnown RBP14.98□□□□□ -0.01
HDAC1-210ENST00000490081 FAM198AQ9UFP1 575 aa14.98□□□□□ -0.01
HDAC1-210ENST00000490081 CNTNAP1P78357 1384 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms