RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 APPP05067 770 aa13.87□□□□□ -0.19
TRIM40-208ENST00000489892 PRDX5P30044 214 aa13.87□□□□□ -0.19
TRIM40-208ENST00000489892 MMP14P50281 582 aa13.87□□□□□ -0.19
TRIM40-208ENST00000489892 GTF2IP78347 998 aa13.87□□□□□ -0.19
TRIM40-208ENST00000489892 RASSF7Q02833 373 aa13.87□□□□□ -0.19
TRIM40-208ENST00000489892 OLFM4Q6UX06 510 aa13.87□□□□□ -0.19
TRIM40-208ENST00000489892 CCDC129Q6ZRS4 1044 aa13.87□□□□□ -0.19
TRIM40-208ENST00000489892 USP17L1Q7RTZ2 530 aa13.87□□□□□ -0.19
TRIM40-208ENST00000489892 NIM1KQ8IY84 436 aa13.87□□□□□ -0.19
TRIM40-208ENST00000489892 LARGE2Q8N3Y3 721 aa13.87□□□□□ -0.19
TRIM40-208ENST00000489892 RRAGCQ9HB90 399 aa13.87□□□□□ -0.19
TRIM40-208ENST00000489892 PATL2C9JE40 543 aaKnown RBP13.86□□□□□ -0.19
TRIM40-208ENST00000489892 SLC27A2O14975 620 aa13.86□□□□□ -0.19
TRIM40-208ENST00000489892 LMNB1P20700 586 aa13.86□□□□□ -0.19
TRIM40-208ENST00000489892 NT5C2P49902 561 aa13.86□□□□□ -0.19
TRIM40-208ENST00000489892 HDLBPQ00341 1268 aaKnown RBP13.86□□□□□ -0.19
TRIM40-208ENST00000489892 MLLT1Q03111 559 aaPredicted RBP13.86□□□□□ -0.19
TRIM40-208ENST00000489892 AOC3Q16853 763 aa13.86□□□□□ -0.19
TRIM40-208ENST00000489892 AMOTL1Q8IY63 956 aa13.86□□□□□ -0.19
TRIM40-208ENST00000489892 JDP2Q8WYK2 163 aa13.86□□□□□ -0.19
TRIM40-208ENST00000489892 FBXW7Q969H0 707 aa13.86□□□□□ -0.19
TRIM40-208ENST00000489892 FAM163AQ96GL9 167 aaPredicted RBP13.86□□□□□ -0.19
TRIM40-208ENST00000489892 KIF2CQ99661 725 aa13.86□□□□□ -0.19
TRIM40-208ENST00000489892 NAPBQ9H115 298 aa13.86□□□□□ -0.19
TRIM40-208ENST00000489892 SNX14Q9Y5W7 946 aa13.86□□□□□ -0.19
TRIM40-208ENST00000489892 MYO5AQ9Y4I1 1855 aaKnown RBP13.86□□□□□ -0.19
TRIM40-208ENST00000489892 ZNF213O14771 459 aa13.85□□□□□ -0.19
TRIM40-208ENST00000489892 IARSP41252 1262 aaKnown RBP13.85□□□□□ -0.19
TRIM40-208ENST00000489892 PPP4CP60510 307 aa13.85□□□□□ -0.19
TRIM40-208ENST00000489892 DOK7Q18PE1 504 aa13.85□□□□□ -0.19
TRIM40-208ENST00000489892 SMC1BQ8NDV3 1235 aa13.85□□□□□ -0.19
TRIM40-208ENST00000489892 MRIQ9BWK5 157 aa13.85□□□□□ -0.19
TRIM40-208ENST00000489892 ATP8A2Q9NTI2 1148 aa13.85□□□□□ -0.19
TRIM40-208ENST00000489892 CYP46A1Q9Y6A2 500 aa13.85□□□□□ -0.19
TRIM40-208ENST00000489892 SLC4A4Q9Y6R1 1079 aa13.85□□□□□ -0.19
TRIM40-208ENST00000489892 MROH7-TTC4A0A0A0MT08 1334 aa13.85□□□□□ -0.19
TRIM40-208ENST00000489892 PCP11498 1178 aaKnown RBP13.84□□□□□ -0.19
TRIM40-208ENST00000489892 TDO2P48775 406 aa13.84□□□□□ -0.19
TRIM40-208ENST00000489892 TRDNQ13061 729 aa13.84□□□□□ -0.19
TRIM40-208ENST00000489892 ANKRD1Q15327 319 aa13.84□□□□□ -0.19
TRIM40-208ENST00000489892 SLC51AQ86UW1 340 aa13.84□□□□□ -0.19
TRIM40-208ENST00000489892 RIOK1Q9BRS2 568 aaKnown RBP13.84□□□□□ -0.19
TRIM40-208ENST00000489892 RNF41Q9H4P4 317 aaPredicted RBP13.84□□□□□ -0.19
TRIM40-208ENST00000489892 ARMT1Q9H993 441 aa13.84□□□□□ -0.19
TRIM40-208ENST00000489892 DBNDD1Q9H9R9 158 aa13.84□□□□□ -0.19
TRIM40-208ENST00000489892 ZNRF3Q9ULT6 936 aa13.84□□□□□ -0.19
TRIM40-208ENST00000489892 FGAP02671 866 aa13.83□□□□□ -0.2
TRIM40-208ENST00000489892 SLC3A2P08195 630 aaKnown RBP13.83□□□□□ -0.2
TRIM40-208ENST00000489892 NEK4P51957 841 aa13.83□□□□□ -0.2
TRIM40-208ENST00000489892 VPS53Q5VIR6 699 aa13.83□□□□□ -0.2
TRIM40-208ENST00000489892 BLOC1S2Q6QNY1 142 aa13.83□□□□□ -0.2
TRIM40-208ENST00000489892 HHIPL2Q6UWX4 724 aa13.83□□□□□ -0.2
TRIM40-208ENST00000489892 LCORLQ8N3X6 602 aa13.83□□□□□ -0.2
TRIM40-208ENST00000489892 MIGA1Q8NAN2 632 aa13.83□□□□□ -0.2
TRIM40-208ENST00000489892 TEKT1Q969V4 418 aa13.83□□□□□ -0.2
TRIM40-208ENST00000489892 JAKMIP1Q96N16 626 aaKnown RBP13.83□□□□□ -0.2
TRIM40-208ENST00000489892 CNNM2Q9H8M5 875 aa13.83□□□□□ -0.2
TRIM40-208ENST00000489892 PALD1Q9ULE6 856 aa13.83□□□□□ -0.2
TRIM40-208ENST00000489892 GAKO14976 1311 aa13.83□□□□□ -0.2
TRIM40-208ENST00000489892 FER1L6Q2WGJ9 1857 aa13.82□□□□□ -0.2
TRIM40-208ENST00000489892 GPR75-ASB3A0A0A6YYF3 556 aa13.82□□□□□ -0.2
TRIM40-208ENST00000489892 DDX11L8A8MPP1 907 aa13.82□□□□□ -0.2
TRIM40-208ENST00000489892 CHGBP05060 677 aa13.82□□□□□ -0.2
TRIM40-208ENST00000489892 CYP21A2P08686 494 aa13.82□□□□□ -0.2
TRIM40-208ENST00000489892 CASTP20810 708 aaKnown RBP13.82□□□□□ -0.2
TRIM40-208ENST00000489892 TNIP1Q15025 636 aa13.82□□□□□ -0.2
TRIM40-208ENST00000489892 SLFNL1Q499Z3 407 aa13.82□□□□□ -0.2
TRIM40-208ENST00000489892 DACT2Q5SW24 774 aa13.82□□□□□ -0.2
TRIM40-208ENST00000489892 L1TD1Q5T7N2 865 aaKnown RBP13.82□□□□□ -0.2
TRIM40-208ENST00000489892 RALYLQ86SE5 291 aaKnown RBP13.82□□□□□ -0.2
TRIM40-208ENST00000489892 IFNL3Q8IZI9 196 aa13.82□□□□□ -0.2
TRIM40-208ENST00000489892 CHMP4CQ96CF2 233 aa13.82□□□□□ -0.2
TRIM40-208ENST00000489892 NEK1Q96PY6 1258 aa13.82□□□□□ -0.2
TRIM40-208ENST00000489892 ZSWIM6Q9HCJ5 1215 aa13.82□□□□□ -0.2
TRIM40-208ENST00000489892 ARPP21Q9UBL0 812 aaPredicted RBP13.82□□□□□ -0.2
TRIM40-208ENST00000489892 TTF2Q9UNY4 1162 aaKnown RBP13.82□□□□□ -0.2
TRIM40-208ENST00000489892 JAG2Q9Y219 1238 aa13.82□□□□□ -0.2
TRIM40-208ENST00000489892 PSME4Q14997 1843 aa13.81□□□□□ -0.2
TRIM40-208ENST00000489892 LAMA4Q16363 1823 aa13.81□□□□□ -0.2
TRIM40-208ENST00000489892 GLTPD2A6NH11 291 aa13.81□□□□□ -0.2
TRIM40-208ENST00000489892 GSG1L2A8MUP6 293 aa13.81□□□□□ -0.2
TRIM40-208ENST00000489892 K7ELQ4 463 aaPredicted RBP13.81□□□□□ -0.2
TRIM40-208ENST00000489892 HSP90AA1P07900 732 aaKnown RBP13.81□□□□□ -0.2
TRIM40-208ENST00000489892 VEGFAP15692 232 aaPredicted RBP13.81□□□□□ -0.2
TRIM40-208ENST00000489892 RGS19P49795 217 aa13.81□□□□□ -0.2
TRIM40-208ENST00000489892 RUFY3Q7L099 469 aa13.81□□□□□ -0.2
TRIM40-208ENST00000489892 RASEFQ8IZ41 740 aa13.81□□□□□ -0.2
TRIM40-208ENST00000489892 ALDH8A1Q9H2A2 487 aaPredicted RBP13.81□□□□□ -0.2
TRIM40-208ENST00000489892 ZNF277Q9NRM2 450 aaPredicted RBP13.81□□□□□ -0.2
TRIM40-208ENST00000489892 AATFQ9NY61 560 aaKnown RBP eCLIP13.81□□□□□ -0.2
TRIM40-208ENST00000489892 HDAC9Q9UKV0 1011 aa13.81□□□□□ -0.2
TRIM40-208ENST00000489892 TAOK2Q9UL54 1235 aa13.81□□□□□ -0.2
TRIM40-208ENST00000489892 MYH2Q9UKX2 1941 aa13.81□□□□□ -0.2
TRIM40-208ENST00000489892 WDR19Q8NEZ3 1342 aa13.81□□□□□ -0.2
TRIM40-208ENST00000489892 DICER1Q9UPY3 1922 aaKnown RBP13.8□□□□□ -0.2
TRIM40-208ENST00000489892 USP5P45974 858 aa13.8□□□□□ -0.2
TRIM40-208ENST00000489892 ADGRA1Q86SQ6 560 aa13.8□□□□□ -0.2
TRIM40-208ENST00000489892 OGFOD1Q8N543 542 aa13.8□□□□□ -0.2
TRIM40-208ENST00000489892 AGBL3Q8NEM8 1001 aa13.8□□□□□ -0.2
TRIM40-208ENST00000489892 NCOA7Q8NI08 942 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms