RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 MYRFLQ96LU7 910 aa9.15□□□□□ -0.94
CCDC39-206ENST00000489868 CYP4F12Q9HCS2 524 aa9.15□□□□□ -0.94
CCDC39-206ENST00000489868 CACNA2D2Q9NY47 1150 aa9.15□□□□□ -0.94
CCDC39-206ENST00000489868 PPP1R9AQ9ULJ8 1098 aa9.15□□□□□ -0.94
CCDC39-206ENST00000489868 PCDHGC5Q9Y5F6 944 aa9.15□□□□□ -0.94
CCDC39-206ENST00000489868 RBM47A0AV96 593 aaKnown RBP9.14□□□□□ -0.95
CCDC39-206ENST00000489868 H2AFB1P0C5Y9 115 aa9.14□□□□□ -0.95
CCDC39-206ENST00000489868 H2AFB2P0C5Z0 115 aa9.14□□□□□ -0.95
CCDC39-206ENST00000489868 SOX4Q06945 474 aaPredicted RBP9.14□□□□□ -0.95
CCDC39-206ENST00000489868 CCDC85BQ15834 202 aaPredicted RBP9.14□□□□□ -0.95
CCDC39-206ENST00000489868 UVSSAQ2YD98 709 aa9.14□□□□□ -0.95
CCDC39-206ENST00000489868 AKAP4Q5JQC9 854 aa9.14□□□□□ -0.95
CCDC39-206ENST00000489868 LDLRAD1Q5T700 205 aa9.14□□□□□ -0.95
CCDC39-206ENST00000489868 SV2BQ7L1I2 683 aa9.14□□□□□ -0.95
CCDC39-206ENST00000489868 KCNB2Q92953 911 aa9.14□□□□□ -0.95
CCDC39-206ENST00000489868 MRS2Q9HD23 443 aa9.14□□□□□ -0.95
CCDC39-206ENST00000489868 USP31Q70CQ4 1352 aa9.13□□□□□ -0.95
CCDC39-206ENST00000489868 TAF1CQ15572 869 aaPredicted RBP9.13□□□□□ -0.95
CCDC39-206ENST00000489868 SGO2Q562F6 1265 aa9.13□□□□□ -0.95
CCDC39-206ENST00000489868 SEMA6BQ9H3T3 888 aa9.13□□□□□ -0.95
CCDC39-206ENST00000489868 CBX8Q9HC52 389 aa9.13□□□□□ -0.95
CCDC39-206ENST00000489868 KRT82Q9NSB4 513 aa9.13□□□□□ -0.95
CCDC39-206ENST00000489868 SART1O43290 800 aaKnown RBP9.12□□□□□ -0.95
CCDC39-206ENST00000489868 ADAM23O75077 832 aa9.12□□□□□ -0.95
CCDC39-206ENST00000489868 BMP3P12645 472 aa9.12□□□□□ -0.95
CCDC39-206ENST00000489868 KIF4BQ2VIQ3 1234 aa9.12□□□□□ -0.95
CCDC39-206ENST00000489868 FAM20CQ8IXL6 584 aa9.12□□□□□ -0.95
CCDC39-206ENST00000489868 GPBAR1Q8TDU6 330 aa9.12□□□□□ -0.95
CCDC39-206ENST00000489868 RAD18Q9NS91 495 aa9.12□□□□□ -0.95
CCDC39-206ENST00000489868 ACTL7BQ9Y614 415 aa9.12□□□□□ -0.95
CCDC39-206ENST00000489868 K7ELQ4 463 aaPredicted RBP9.11□□□□□ -0.95
CCDC39-206ENST00000489868 TMPRSS2O15393 492 aa9.11□□□□□ -0.95
CCDC39-206ENST00000489868 ST13P50502 369 aaKnown RBP9.11□□□□□ -0.95
CCDC39-206ENST00000489868 PTPN11Q06124 597 aaPredicted RBP9.11□□□□□ -0.95
CCDC39-206ENST00000489868 MAP3K11Q16584 847 aa9.11□□□□□ -0.95
CCDC39-206ENST00000489868 TTBK2Q6IQ55 1244 aa9.11□□□□□ -0.95
CCDC39-206ENST00000489868 CDPF1Q6NVV7 123 aa9.11□□□□□ -0.95
CCDC39-206ENST00000489868 FAM105AQ9NUU6 356 aa9.11□□□□□ -0.95
CCDC39-206ENST00000489868 DHX15O43143 795 aaKnown RBP9.1□□□□□ -0.95
CCDC39-206ENST00000489868 HP1BP3Q5SSJ5 553 aaPredicted RBP9.1□□□□□ -0.95
CCDC39-206ENST00000489868 LLGL2Q6P1M3 1020 aa9.1□□□□□ -0.95
CCDC39-206ENST00000489868 EMILIN2Q9BXX0 1053 aa9.1□□□□□ -0.95
CCDC39-206ENST00000489868 GSX1Q9H4S2 264 aaPredicted RBP9.1□□□□□ -0.95
CCDC39-206ENST00000489868 AP4E1Q9UPM8 1137 aa9.1□□□□□ -0.95
CCDC39-206ENST00000489868 SYNGAP1Q96PV0 1343 aa9.09□□□□□ -0.95
CCDC39-206ENST00000489868 HMX2A2RU54 273 aa9.09□□□□□ -0.95
CCDC39-206ENST00000489868 F6X3S4 739 aa9.09□□□□□ -0.95
CCDC39-206ENST00000489868 GAS2O43903 313 aaKnown RBP9.09□□□□□ -0.95
CCDC39-206ENST00000489868 GAL3ST3Q96A11 431 aa9.09□□□□□ -0.95
CCDC39-206ENST00000489868 C7orf69Q9H7B7 122 aa9.09□□□□□ -0.95
CCDC39-206ENST00000489868 CRIM1Q9NZV1 1036 aa9.09□□□□□ -0.95
CCDC39-206ENST00000489868 RAXQ9Y2V3 346 aa9.09□□□□□ -0.95
CCDC39-206ENST00000489868 LIG3P49916 1009 aa9.08□□□□□ -0.96
CCDC39-206ENST00000489868 PRSS36Q5K4E3 855 aa9.08□□□□□ -0.96
CCDC39-206ENST00000489868 DYMQ7RTS9 669 aa9.08□□□□□ -0.96
CCDC39-206ENST00000489868 TRIM42Q8IWZ5 723 aa9.08□□□□□ -0.96
CCDC39-206ENST00000489868 FBLIM1Q8WUP2 373 aa9.08□□□□□ -0.96
CCDC39-206ENST00000489868 NOC4LQ9BVI4 516 aaKnown RBP9.08□□□□□ -0.96
CCDC39-206ENST00000489868 TLR6Q9Y2C9 796 aa9.08□□□□□ -0.96
CCDC39-206ENST00000489868 SAMM50Q9Y512 469 aa9.08□□□□□ -0.96
CCDC39-206ENST00000489868 PCDHB5Q9Y5E4 795 aa9.08□□□□□ -0.96
CCDC39-206ENST00000489868 UNCXA6NJT0 531 aa9.07□□□□□ -0.96
CCDC39-206ENST00000489868 TRIM37O94972 964 aa9.07□□□□□ -0.96
CCDC39-206ENST00000489868 MAP4P27816 1152 aaKnown RBP9.07□□□□□ -0.96
CCDC39-206ENST00000489868 ID3Q02535 119 aa9.07□□□□□ -0.96
CCDC39-206ENST00000489868 ZC3H12AQ5D1E8 599 aaKnown RBP9.07□□□□□ -0.96
CCDC39-206ENST00000489868 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.07□□□□□ -0.96
CCDC39-206ENST00000489868 BEND4Q6ZU67 534 aa9.07□□□□□ -0.96
CCDC39-206ENST00000489868 KCNF1Q9H3M0 494 aa9.07□□□□□ -0.96
CCDC39-206ENST00000489868 DISC1Q9NRI5 854 aa9.07□□□□□ -0.96
CCDC39-206ENST00000489868 STOML1Q9UBI4 398 aa9.07□□□□□ -0.96
CCDC39-206ENST00000489868 CYP8B1Q9UNU6 501 aa9.07□□□□□ -0.96
CCDC39-206ENST00000489868 HIF3AQ9Y2N7 669 aa9.07□□□□□ -0.96
CCDC39-206ENST00000489868 CCDC9Q9Y3X0 531 aaKnown RBP9.07□□□□□ -0.96
CCDC39-206ENST00000489868 TFE3P19532 575 aaPredicted RBP9.06□□□□□ -0.96
CCDC39-206ENST00000489868 CDK8P49336 464 aa9.06□□□□□ -0.96
CCDC39-206ENST00000489868 LRRC14Q15048 493 aa9.06□□□□□ -0.96
CCDC39-206ENST00000489868 AGMOQ6ZNB7 445 aa9.06□□□□□ -0.96
CCDC39-206ENST00000489868 ACSBG1Q96GR2 724 aa9.06□□□□□ -0.96
CCDC39-206ENST00000489868 FANCD2OSQ96PS1 177 aa9.06□□□□□ -0.96
CCDC39-206ENST00000489868 FAM83CQ9BQN1 747 aa9.06□□□□□ -0.96
CCDC39-206ENST00000489868 ACSS3Q9H6R3 686 aa9.06□□□□□ -0.96
CCDC39-206ENST00000489868 FSTP19883 344 aa9.05□□□□□ -0.96
CCDC39-206ENST00000489868 RAB6AP20340 208 aa9.05□□□□□ -0.96
CCDC39-206ENST00000489868 ASPAP45381 313 aa9.05□□□□□ -0.96
CCDC39-206ENST00000489868 USP11P51784 963 aa9.05□□□□□ -0.96
CCDC39-206ENST00000489868 RPS26P62854 115 aaKnown RBP9.05□□□□□ -0.96
CCDC39-206ENST00000489868 SEPT6Q14141 434 aa9.05□□□□□ -0.96
CCDC39-206ENST00000489868 CLEC10AQ8IUN9 316 aa9.05□□□□□ -0.96
CCDC39-206ENST00000489868 PHC3Q8NDX5 983 aa9.05□□□□□ -0.96
CCDC39-206ENST00000489868 EZH1Q92800 747 aaPredicted RBP9.05□□□□□ -0.96
CCDC39-206ENST00000489868 SEMA6CQ9H3T2 930 aa9.05□□□□□ -0.96
CCDC39-206ENST00000489868 PODXL2Q9NZ53 605 aa9.05□□□□□ -0.96
CCDC39-206ENST00000489868 NEFMP07197 916 aa9.04□□□□□ -0.96
CCDC39-206ENST00000489868 SLFN14P0C7P3 912 aa9.04□□□□□ -0.96
CCDC39-206ENST00000489868 INPP5AQ14642 412 aa9.04□□□□□ -0.96
CCDC39-206ENST00000489868 SHISA5Q8N114 240 aa9.04□□□□□ -0.96
CCDC39-206ENST00000489868 BACH2Q9BYV9 841 aa9.04□□□□□ -0.96
CCDC39-206ENST00000489868 COPRSQ9NQ92 184 aa9.04□□□□□ -0.96
CCDC39-206ENST00000489868 CSADQ9Y600 493 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms