RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 NUTM2GQ5VZR2 741 aa9.23□□□□□ -0.93
VPS26A-206ENST00000489794 USP48Q86UV5 1035 aa9.23□□□□□ -0.93
VPS26A-206ENST00000489794 METTL16Q86W50 562 aaKnown RBP9.23□□□□□ -0.93
VPS26A-206ENST00000489794 KCNB2Q92953 911 aa9.23□□□□□ -0.93
VPS26A-206ENST00000489794 MIR1-1HGQ9H1L0 117 aa9.23□□□□□ -0.93
VPS26A-206ENST00000489794 AKTIPQ9H8T0 292 aa9.23□□□□□ -0.93
VPS26A-206ENST00000489794 KBTBD4Q9NVX7 518 aa9.23□□□□□ -0.93
VPS26A-206ENST00000489794 F8W735 103 aaPredicted RBP9.22□□□□□ -0.93
VPS26A-206ENST00000489794 ITGB2P05107 769 aa9.22□□□□□ -0.93
VPS26A-206ENST00000489794 SLFN14P0C7P3 912 aa9.22□□□□□ -0.93
VPS26A-206ENST00000489794 MAP1SQ66K74 1059 aaPredicted RBP9.22□□□□□ -0.93
VPS26A-206ENST00000489794 ANKRD34AQ69YU3 496 aa9.22□□□□□ -0.93
VPS26A-206ENST00000489794 SHISA2Q6UWI4 295 aa9.22□□□□□ -0.93
VPS26A-206ENST00000489794 KIAA1211Q6ZU35 1233 aa9.22□□□□□ -0.93
VPS26A-206ENST00000489794 NT5DC4Q86YG4 428 aa9.22□□□□□ -0.93
VPS26A-206ENST00000489794 TRIM42Q8IWZ5 723 aa9.22□□□□□ -0.93
VPS26A-206ENST00000489794 ZNF654Q8IZM8 581 aa9.22□□□□□ -0.93
VPS26A-206ENST00000489794 STK35Q8TDR2 534 aa9.22□□□□□ -0.93
VPS26A-206ENST00000489794 TMPRSS13Q9BYE2 586 aa9.22□□□□□ -0.93
VPS26A-206ENST00000489794 CEP41Q9BYV8 373 aa9.22□□□□□ -0.93
VPS26A-206ENST00000489794 TGIF2Q9GZN2 237 aa9.22□□□□□ -0.93
VPS26A-206ENST00000489794 SUGCTQ9HAC7 445 aa9.22□□□□□ -0.93
VPS26A-206ENST00000489794 RAD18Q9NS91 495 aa9.22□□□□□ -0.93
VPS26A-206ENST00000489794 CACNA2D2Q9NY47 1150 aa9.22□□□□□ -0.93
VPS26A-206ENST00000489794 KRBA1A5PL33 1030 aa9.21□□□□□ -0.94
VPS26A-206ENST00000489794 ADGRE1Q14246 886 aa9.21□□□□□ -0.94
VPS26A-206ENST00000489794 KIF4BQ2VIQ3 1234 aa9.21□□□□□ -0.94
VPS26A-206ENST00000489794 SMG8Q8ND04 991 aaKnown RBP9.21□□□□□ -0.94
VPS26A-206ENST00000489794 ACSBG1Q96GR2 724 aa9.21□□□□□ -0.94
VPS26A-206ENST00000489794 RHOVQ96L33 236 aa9.21□□□□□ -0.94
VPS26A-206ENST00000489794 CCDC86Q9H6F5 360 aaKnown RBP9.21□□□□□ -0.94
VPS26A-206ENST00000489794 WISP1O95388 367 aa9.2□□□□□ -0.94
VPS26A-206ENST00000489794 PROCP04070 461 aa9.2□□□□□ -0.94
VPS26A-206ENST00000489794 ERCC5P28715 1186 aaPredicted RBP9.2□□□□□ -0.94
VPS26A-206ENST00000489794 FDX2Q6P4F2 183 aa9.2□□□□□ -0.94
VPS26A-206ENST00000489794 KCNQ5Q9NR82 932 aa9.2□□□□□ -0.94
VPS26A-206ENST00000489794 DDX41Q9UJV9 622 aaKnown RBP9.2□□□□□ -0.94
VPS26A-206ENST00000489794 TFE3P19532 575 aaPredicted RBP9.19□□□□□ -0.94
VPS26A-206ENST00000489794 EIF4A3P38919 411 aaKnown RBP9.19□□□□□ -0.94
VPS26A-206ENST00000489794 CAMK2GQ13555 558 aaPredicted RBP9.19□□□□□ -0.94
VPS26A-206ENST00000489794 MBTPS1Q14703 1052 aa9.19□□□□□ -0.94
VPS26A-206ENST00000489794 Q6ZS46 218 aa9.19□□□□□ -0.94
VPS26A-206ENST00000489794 TXNRD3Q86VQ6 643 aa9.19□□□□□ -0.94
VPS26A-206ENST00000489794 GRIN3AQ8TCU5 1115 aa9.19□□□□□ -0.94
VPS26A-206ENST00000489794 TLR6Q9Y2C9 796 aa9.19□□□□□ -0.94
VPS26A-206ENST00000489794 SUPT16HQ9Y5B9 1047 aaKnown RBP9.19□□□□□ -0.94
VPS26A-206ENST00000489794 AOC2O75106 756 aa9.18□□□□□ -0.94
VPS26A-206ENST00000489794 ECEL1O95672 775 aa9.18□□□□□ -0.94
VPS26A-206ENST00000489794 RANGAP1P46060 587 aaPredicted RBP9.18□□□□□ -0.94
VPS26A-206ENST00000489794 UVSSAQ2YD98 709 aa9.18□□□□□ -0.94
VPS26A-206ENST00000489794 SNAP47Q5SQN1 464 aa9.18□□□□□ -0.94
VPS26A-206ENST00000489794 GPBAR1Q8TDU6 330 aa9.18□□□□□ -0.94
VPS26A-206ENST00000489794 WFDC12Q8WWY7 111 aa9.18□□□□□ -0.94
VPS26A-206ENST00000489794 ZC3H12CQ9C0D7 883 aaKnown RBP9.18□□□□□ -0.94
VPS26A-206ENST00000489794 ROBO2Q9HCK4 1378 aa9.18□□□□□ -0.94
VPS26A-206ENST00000489794 COPRSQ9NQ92 184 aa9.18□□□□□ -0.94
VPS26A-206ENST00000489794 MINDY4BA8MYZ0 360 aa9.17□□□□□ -0.94
VPS26A-206ENST00000489794 DLGAP3O95886 979 aa9.17□□□□□ -0.94
VPS26A-206ENST00000489794 PF4P02776 101 aa9.17□□□□□ -0.94
VPS26A-206ENST00000489794 CTSBP07858 339 aa9.17□□□□□ -0.94
VPS26A-206ENST00000489794 SPATA32Q96LK8 384 aa9.17□□□□□ -0.94
VPS26A-206ENST00000489794 WDR18Q9BV38 432 aa9.17□□□□□ -0.94
VPS26A-206ENST00000489794 CCSER2Q9H7U1 834 aa9.17□□□□□ -0.94
VPS26A-206ENST00000489794 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.17□□□□□ -0.94
VPS26A-206ENST00000489794 ZNF862O60290 1169 aa9.16□□□□□ -0.94
VPS26A-206ENST00000489794 ADAM23O75077 832 aa9.16□□□□□ -0.94
VPS26A-206ENST00000489794 GLB1P16278 677 aa9.16□□□□□ -0.94
VPS26A-206ENST00000489794 LIG1P18858 919 aa9.16□□□□□ -0.94
VPS26A-206ENST00000489794 ZNF394Q53GI3 561 aa9.16□□□□□ -0.94
VPS26A-206ENST00000489794 RASIP1Q5U651 963 aa9.16□□□□□ -0.94
VPS26A-206ENST00000489794 C9orf131Q5VYM1 1079 aa9.16□□□□□ -0.94
VPS26A-206ENST00000489794 KIAA0825Q8IV33 1275 aa9.16□□□□□ -0.94
VPS26A-206ENST00000489794 GATAD2BQ8WXI9 593 aa9.16□□□□□ -0.94
VPS26A-206ENST00000489794 GAL3ST3Q96A11 431 aa9.16□□□□□ -0.94
VPS26A-206ENST00000489794 SPON2Q9BUD6 331 aa9.16□□□□□ -0.94
VPS26A-206ENST00000489794 SART1O43290 800 aaKnown RBP9.15□□□□□ -0.94
VPS26A-206ENST00000489794 TIAF1O95411 115 aa9.15□□□□□ -0.94
VPS26A-206ENST00000489794 BPNT1O95861 308 aa9.15□□□□□ -0.94
VPS26A-206ENST00000489794 NOS3P29474 1203 aa9.15□□□□□ -0.94
VPS26A-206ENST00000489794 IREB2P48200 963 aaKnown RBP9.15□□□□□ -0.94
VPS26A-206ENST00000489794 ID3Q02535 119 aa9.15□□□□□ -0.94
VPS26A-206ENST00000489794 SOX4Q06945 474 aaPredicted RBP9.15□□□□□ -0.94
VPS26A-206ENST00000489794 HDXQ7Z353 690 aa9.15□□□□□ -0.94
VPS26A-206ENST00000489794 C12orf50Q8NA57 414 aaPredicted RBP9.15□□□□□ -0.94
VPS26A-206ENST00000489794 GOLM1Q8NBJ4 401 aa9.15□□□□□ -0.94
VPS26A-206ENST00000489794 PCDHA4Q9UN74 947 aa9.15□□□□□ -0.94
VPS26A-206ENST00000489794 PCDHB5Q9Y5E4 795 aa9.15□□□□□ -0.94
VPS26A-206ENST00000489794 TACC3Q9Y6A5 838 aa9.15□□□□□ -0.94
VPS26A-206ENST00000489794 SNCAIPQ9Y6H5 919 aa9.15□□□□□ -0.94
VPS26A-206ENST00000489794 ADH5P11766 374 aa9.14□□□□□ -0.95
VPS26A-206ENST00000489794 ERVK-24P63145 666 aa9.14□□□□□ -0.95
VPS26A-206ENST00000489794 GNL2Q13823 731 aaKnown RBP9.14□□□□□ -0.95
VPS26A-206ENST00000489794 SEPT6Q14141 434 aa9.14□□□□□ -0.95
VPS26A-206ENST00000489794 AKAP4Q5JQC9 854 aa9.14□□□□□ -0.95
VPS26A-206ENST00000489794 CD163Q86VB7 1156 aa9.14□□□□□ -0.95
VPS26A-206ENST00000489794 AGGF1Q8N302 714 aaeCLIP9.14□□□□□ -0.95
VPS26A-206ENST00000489794 ZNF296Q8WUU4 475 aaPredicted RBP9.14□□□□□ -0.95
VPS26A-206ENST00000489794 NT5C1AQ9BXI3 368 aa9.14□□□□□ -0.95
VPS26A-206ENST00000489794 ATXN3LQ9H3M9 355 aa9.14□□□□□ -0.95
VPS26A-206ENST00000489794 PCDHGB7Q9Y5F8 929 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms