RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 EIF2S2P20042 333 aaKnown RBP11.49□□□□□ -0.57
TNRC6B-208ENST00000489500 PTGIRP43119 386 aa11.49□□□□□ -0.57
TNRC6B-208ENST00000489500 KRT76Q01546 638 aa11.49□□□□□ -0.57
TNRC6B-208ENST00000489500 CALD1Q05682 793 aaKnown RBP11.49□□□□□ -0.57
TNRC6B-208ENST00000489500 PARP10Q53GL7 1025 aa11.49□□□□□ -0.57
TNRC6B-208ENST00000489500 HSP90AB3PQ58FF7 597 aa11.49□□□□□ -0.57
TNRC6B-208ENST00000489500 RPGRQ92834 1020 aaKnown RBP11.49□□□□□ -0.57
TNRC6B-208ENST00000489500 THUMPD2Q9BTF0 503 aaKnown RBP11.49□□□□□ -0.57
TNRC6B-208ENST00000489500 CHMP4AQ9BY43 222 aa11.49□□□□□ -0.57
TNRC6B-208ENST00000489500 NFKBIEO00221 500 aa11.48□□□□□ -0.57
TNRC6B-208ENST00000489500 ZEB1P37275 1124 aaPredicted RBP11.48□□□□□ -0.57
TNRC6B-208ENST00000489500 HLFQ16534 295 aa11.48□□□□□ -0.57
TNRC6B-208ENST00000489500 CC2D2BQ6DHV5 1058 aa11.48□□□□□ -0.57
TNRC6B-208ENST00000489500 LAS1LQ9Y4W2 734 aaKnown RBP11.48□□□□□ -0.57
TNRC6B-208ENST00000489500 IBTKQ9P2D0 1353 aaPredicted RBP11.47□□□□□ -0.57
TNRC6B-208ENST00000489500 IQCA1LA6NCM1 817 aa11.47□□□□□ -0.57
TNRC6B-208ENST00000489500 GPR37L1O60883 481 aa11.47□□□□□ -0.57
TNRC6B-208ENST00000489500 TPRNQ4KMQ1 711 aa11.47□□□□□ -0.57
TNRC6B-208ENST00000489500 FOXD4L5Q5VV16 416 aaPredicted RBP11.47□□□□□ -0.57
TNRC6B-208ENST00000489500 RBM17Q96I25 401 aaKnown RBP11.47□□□□□ -0.57
TNRC6B-208ENST00000489500 WDR90Q96KV7 1748 aa11.46□□□□□ -0.57
TNRC6B-208ENST00000489500 RNF123Q5XPI4 1314 aa11.46□□□□□ -0.57
TNRC6B-208ENST00000489500 KLRG2A4D1S0 409 aaPredicted RBP11.46□□□□□ -0.57
TNRC6B-208ENST00000489500 FKBP4Q02790 459 aaKnown RBP eCLIP11.46□□□□□ -0.57
TNRC6B-208ENST00000489500 CCDC146Q8IYE0 955 aa11.46□□□□□ -0.57
TNRC6B-208ENST00000489500 MTMR14Q8NCE2 650 aa11.46□□□□□ -0.57
TNRC6B-208ENST00000489500 NLRP3Q96P20 1036 aa11.46□□□□□ -0.57
TNRC6B-208ENST00000489500 SNRKQ9NRH2 765 aa11.46□□□□□ -0.57
TNRC6B-208ENST00000489500 SCN4AP35499 1836 aa11.45□□□□□ -0.58
TNRC6B-208ENST00000489500 GPTP24298 496 aa11.45□□□□□ -0.58
TNRC6B-208ENST00000489500 TTLL7Q6ZT98 887 aa11.45□□□□□ -0.58
TNRC6B-208ENST00000489500 BANK1Q8NDB2 785 aa11.45□□□□□ -0.58
TNRC6B-208ENST00000489500 JDP2Q8WYK2 163 aa11.45□□□□□ -0.58
TNRC6B-208ENST00000489500 UTP14AQ9BVJ6 771 aaKnown RBP11.45□□□□□ -0.58
TNRC6B-208ENST00000489500 ANKRD36CQ5JPF3 1778 aa11.45□□□□□ -0.58
TNRC6B-208ENST00000489500 HOXB7P09629 217 aa11.44□□□□□ -0.58
TNRC6B-208ENST00000489500 NANOS1Q8WY41 292 aaKnown RBP11.44□□□□□ -0.58
TNRC6B-208ENST00000489500 CNTNAP3BQ96NU0 1288 aa11.44□□□□□ -0.58
TNRC6B-208ENST00000489500 CNTNAP3Q9BZ76 1288 aa11.44□□□□□ -0.58
TNRC6B-208ENST00000489500 PRKRIP1Q9H875 184 aaPredicted RBP11.44□□□□□ -0.58
TNRC6B-208ENST00000489500 DDX21Q9NR30 783 aaKnown RBP eCLIP11.44□□□□□ -0.58
TNRC6B-208ENST00000489500 RIC1Q4ADV7 1423 aa11.43□□□□□ -0.58
TNRC6B-208ENST00000489500 CHL1O00533 1208 aa11.43□□□□□ -0.58
TNRC6B-208ENST00000489500 HSP90B1P14625 803 aaKnown RBP11.43□□□□□ -0.58
TNRC6B-208ENST00000489500 ITGA6P23229 1130 aa11.43□□□□□ -0.58
TNRC6B-208ENST00000489500 EIF6P56537 245 aaKnown RBP11.43□□□□□ -0.58
TNRC6B-208ENST00000489500 AIMP1Q12904 312 aaKnown RBP11.43□□□□□ -0.58
TNRC6B-208ENST00000489500 NR1H3Q13133 447 aa11.43□□□□□ -0.58
TNRC6B-208ENST00000489500 CRY2Q49AN0 593 aa11.43□□□□□ -0.58
TNRC6B-208ENST00000489500 SUSD4Q5VX71 490 aa11.43□□□□□ -0.58
TNRC6B-208ENST00000489500 ZNF34Q8IZ26 560 aa11.43□□□□□ -0.58
TNRC6B-208ENST00000489500 VWA5B2Q8N398 1253 aa11.43□□□□□ -0.58
TNRC6B-208ENST00000489500 CRAMP1Q96RY5 1269 aa11.43□□□□□ -0.58
TNRC6B-208ENST00000489500 ADAMTS8Q9UP79 889 aa11.43□□□□□ -0.58
TNRC6B-208ENST00000489500 HOXA10P31260 410 aaPredicted RBP11.42□□□□□ -0.58
TNRC6B-208ENST00000489500 IARSP41252 1262 aaKnown RBP11.42□□□□□ -0.58
TNRC6B-208ENST00000489500 RNFT1Q5M7Z0 435 aa11.42□□□□□ -0.58
TNRC6B-208ENST00000489500 HDGFL1Q5TGJ6 251 aa11.42□□□□□ -0.58
TNRC6B-208ENST00000489500 COPS6Q7L5N1 327 aa11.42□□□□□ -0.58
TNRC6B-208ENST00000489500 SYNE4Q8N205 404 aa11.42□□□□□ -0.58
TNRC6B-208ENST00000489500 SUPT20HQ8NEM7 779 aa11.42□□□□□ -0.58
TNRC6B-208ENST00000489500 C7orf43Q8WVR3 580 aa11.42□□□□□ -0.58
TNRC6B-208ENST00000489500 PSMD1Q99460 953 aa11.42□□□□□ -0.58
TNRC6B-208ENST00000489500 COL25A1Q9BXS0 654 aaPredicted RBP11.42□□□□□ -0.58
TNRC6B-208ENST00000489500 HYPKQ9NX55 129 aa11.42□□□□□ -0.58
TNRC6B-208ENST00000489500 DBF4Q9UBU7 674 aaPredicted RBP11.42□□□□□ -0.58
TNRC6B-208ENST00000489500 DDNO94850 711 aaPredicted RBP11.41□□□□□ -0.58
TNRC6B-208ENST00000489500 PRELPP51888 382 aa11.41□□□□□ -0.58
TNRC6B-208ENST00000489500 GNAI1P63096 354 aa11.41□□□□□ -0.58
TNRC6B-208ENST00000489500 VPS33BQ9H267 617 aa11.41□□□□□ -0.58
TNRC6B-208ENST00000489500 ZNF277Q9NRM2 450 aaPredicted RBP11.41□□□□□ -0.58
TNRC6B-208ENST00000489500 CDC14CA4D256 554 aa11.4□□□□□ -0.58
TNRC6B-208ENST00000489500 BBOX1O75936 387 aa11.4□□□□□ -0.58
TNRC6B-208ENST00000489500 NTSR2O95665 410 aa11.4□□□□□ -0.58
TNRC6B-208ENST00000489500 LMOD1P29536 600 aaPredicted RBP11.4□□□□□ -0.58
TNRC6B-208ENST00000489500 TCIRG1Q13488 830 aa11.4□□□□□ -0.58
TNRC6B-208ENST00000489500 SLC10A5Q5PT55 438 aa11.4□□□□□ -0.58
TNRC6B-208ENST00000489500 DDX46Q7L014 1031 aaKnown RBP11.4□□□□□ -0.58
TNRC6B-208ENST00000489500 TMC4Q7Z404 712 aa11.4□□□□□ -0.58
TNRC6B-208ENST00000489500 PNMA8AQ86V59 439 aaPredicted RBP11.4□□□□□ -0.58
TNRC6B-208ENST00000489500 PLBD2Q8NHP8 589 aa11.4□□□□□ -0.58
TNRC6B-208ENST00000489500 XAGE3Q8WTP9 111 aa11.4□□□□□ -0.58
TNRC6B-208ENST00000489500 KLRG1Q96E93 195 aa11.4□□□□□ -0.58
TNRC6B-208ENST00000489500 TRMT112Q9UI30 125 aaKnown RBP11.4□□□□□ -0.58
TNRC6B-208ENST00000489500 HACL1Q9UJ83 578 aa11.4□□□□□ -0.58
TNRC6B-208ENST00000489500 UBN2Q6ZU65 1347 aa11.39□□□□□ -0.59
TNRC6B-208ENST00000489500 SH3TC1Q8TE82 1336 aa11.39□□□□□ -0.59
TNRC6B-208ENST00000489500 ATP5J2-PTCD1G3V325 749 aa11.39□□□□□ -0.59
TNRC6B-208ENST00000489500 LYSMD3Q7Z3D4 306 aa11.39□□□□□ -0.59
TNRC6B-208ENST00000489500 PRICKLE2Q7Z3G6 844 aa11.39□□□□□ -0.59
TNRC6B-208ENST00000489500 LDHDQ86WU2 507 aa11.39□□□□□ -0.59
TNRC6B-208ENST00000489500 GPC2Q8N158 579 aa11.39□□□□□ -0.59
TNRC6B-208ENST00000489500 LARGE2Q8N3Y3 721 aa11.39□□□□□ -0.59
TNRC6B-208ENST00000489500 IFT57Q9NWB7 429 aa11.39□□□□□ -0.59
TNRC6B-208ENST00000489500 NDUFB9Q9Y6M9 179 aa11.39□□□□□ -0.59
TNRC6B-208ENST00000489500 ABCC12Q96J65 1359 aa11.39□□□□□ -0.59
TNRC6B-208ENST00000489500 ANXA1P04083 346 aa11.38□□□□□ -0.59
TNRC6B-208ENST00000489500 RHOQP17081 205 aa11.38□□□□□ -0.59
TNRC6B-208ENST00000489500 SCTRP47872 440 aa11.38□□□□□ -0.59
TNRC6B-208ENST00000489500 RNF144AP50876 292 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms